ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A879:A880

Extra

PDB:
ATOM 1 O3' A A 878 138.251 -42.016 -4.977 1.00 53.97 O
ATOM 2 P U A 879 139.253 -41.268 -3.975 1.00 57.52 P
ATOM 3 OP1 U A 879 138.443 -40.574 -2.934 1.00 56.00 O
ATOM 4 OP2 U A 879 140.184 -40.480 -4.835 1.00 66.18 O
ATOM 5 O5' U A 879 140.061 -42.457 -3.270 1.00 59.29 O
ATOM 6 C5' U A 879 139.416 -43.293 -2.308 1.00 57.99 C
ATOM 7 C4' U A 879 140.275 -44.484 -1.940 1.00 62.98 C
ATOM 8 O4' U A 879 140.717 -45.166 -3.142 1.00 60.34 O
ATOM 9 C3' U A 879 141.552 -44.224 -1.152 1.00 64.77 C
ATOM 10 O3' U A 879 141.300 -44.091 0.253 1.00 58.64 O
ATOM 11 C2' U A 879 142.369 -45.481 -1.461 1.00 62.41 C
ATOM 12 O2' U A 879 142.023 -46.623 -0.695 1.00 54.25 O
ATOM 13 C1' U A 879 141.987 -45.758 -2.914 1.00 61.92 C
ATOM 14 N1 U A 879 142.962 -45.202 -3.872 1.00 63.86 N
ATOM 15 C2 U A 879 144.277 -45.664 -3.810 1.00 63.63 C
ATOM 16 O2 U A 879 144.662 -46.463 -2.985 1.00 63.27 O
ATOM 17 N3 U A 879 145.125 -45.147 -4.756 1.00 66.84 N
ATOM 18 C4 U A 879 144.815 -44.239 -5.740 1.00 67.89 C
ATOM 19 O4 U A 879 145.635 -44.025 -6.630 1.00 67.12 O
ATOM 20 C5 U A 879 143.458 -43.776 -5.721 1.00 68.18 C
ATOM 21 C6 U A 879 142.599 -44.262 -4.813 1.00 66.08 C
ATOM 22 P A A 880 141.671 -42.718 1.030 1.00 63.98 P
ATOM 23 OP1 A A 880 140.405 -42.161 1.561 1.00 72.00 O
ATOM 24 OP2 A A 880 142.552 -41.854 0.213 1.00 49.02 O
ATOM 25 O5' A A 880 142.514 -43.218 2.278 1.00 64.37 O
TER

ATOM 1 O3' U B 879 141.300 -44.091 0.253 1.00 58.64 O
ATOM 2 P A B 880 141.671 -42.718 1.030 1.00 63.98 P
ATOM 3 OP1 A B 880 140.405 -42.161 1.561 1.00 72.00 O
ATOM 4 OP2 A B 880 142.552 -41.854 0.213 1.00 49.02 O
ATOM 5 O5' A B 880 142.514 -43.218 2.278 1.00 64.37 O
ATOM 6 C5' A B 880 141.893 -43.983 3.292 1.00 59.20 C
ATOM 7 C4' A B 880 142.888 -44.920 3.912 1.00 63.08 C
ATOM 8 O4' A B 880 143.276 -45.949 2.970 1.00 66.91 O
ATOM 9 C3' A B 880 144.195 -44.279 4.316 1.00 60.53 C
ATOM 10 O3' A B 880 144.076 -43.639 5.559 1.00 58.12 O
ATOM 11 C2' A B 880 145.158 -45.454 4.354 1.00 67.77 C
ATOM 12 O2' A B 880 145.122 -46.161 5.574 1.00 59.89 O
ATOM 13 C1' A B 880 144.625 -46.323 3.212 1.00 69.87 C
ATOM 14 N9 A B 880 145.391 -46.145 1.979 1.00 72.71 N
ATOM 15 C8 A B 880 144.955 -45.697 0.759 1.00 73.84 C
ATOM 16 N7 A B 880 145.895 -45.655 -0.152 1.00 70.97 N
ATOM 17 C5 A B 880 147.024 -46.101 0.515 1.00 65.09 C
ATOM 18 C6 A B 880 148.335 -46.288 0.101 1.00 62.28 C
ATOM 19 N6 A B 880 148.756 -46.036 -1.135 1.00 64.56 N
ATOM 20 N1 A B 880 149.216 -46.750 1.004 1.00 65.85 N
ATOM 21 C2 A B 880 148.788 -47.001 2.244 1.00 68.21 C
ATOM 22 N3 A B 880 147.579 -46.863 2.756 1.00 67.19 N
ATOM 23 C4 A B 880 146.730 -46.405 1.826 1.00 68.67 C
ATOM 24 P G B 881 144.851 -42.270 5.797 1.00 65.13 P
ATOM 25 OP1 G B 881 144.101 -41.580 6.876 1.00 56.89 O
ATOM 26 OP2 G B 881 145.050 -41.604 4.486 1.00 59.71 O
ATOM 27 O5' G B 881 146.274 -42.748 6.330 1.00 69.35 O
TER

Atoms:
C4: (144.815,-44.239,-5.740)
N3: (145.125,-45.147,-4.756)
OP1: (138.443,-40.574,-2.934)
OP2: (140.184,-40.480,-4.835)
C2: (144.277,-45.664,-3.810)
C1': (141.987,-45.758,-2.914)
C3': (141.552,-44.224,-1.152)
O5': (140.061,-42.457,-3.270)
O4': (140.717,-45.166,-3.142)
C5': (139.416,-43.293,-2.308)
P: (139.253,-41.268,-3.975)
C4': (140.275,-44.484,-1.940)
C2': (142.369,-45.481,-1.461)
O2': (142.023,-46.623,-0.695)
N1: (142.962,-45.202,-3.872)
O4: (145.635,-44.025,-6.630)
O2: (144.662,-46.463,-2.985)
C6: (142.599,-44.262,-4.813)
C5: (143.458,-43.776,-5.721)
O3': (141.300,-44.091,0.253)
OP1: (140.405,-42.161,1.561)
OP2: (142.552,-41.854,0.213)
C3': (144.195,-44.279,4.316)
C1': (144.625,-46.323,3.212)
C5': (141.893,-43.983,3.292)
O4': (143.276,-45.949,2.970)
C8: (144.955,-45.697,0.759)
O2': (145.122,-46.161,5.574)
C6: (148.335,-46.288,0.101)
C5: (147.024,-46.101,0.515)
C4: (146.730,-46.405,1.826)
P: (141.671,-42.718,1.030)
C4': (142.888,-44.920,3.912)
C2': (145.158,-45.454,4.354)
C2: (148.788,-47.001,2.244)
N1: (149.216,-46.750,1.004)
N3: (147.579,-46.863,2.756)
N6: (148.756,-46.036,-1.135)
N7: (145.895,-45.655,-0.152)
N9: (145.391,-46.145,1.979)
O5': (142.514,-43.218,2.278)
O3': (144.076,-43.639,5.559)
Image (generated by PyMOL):
PyMOL image
show in jmol