ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02439:02440

Extra

PDB:
ATOM 1 O3' U A2438 80.773 136.593 141.696 1.00 41.20 O
ATOM 2 P U A2439 80.012 135.792 142.850 1.00 41.86 P
ATOM 3 OP1 U A2439 79.498 136.768 143.839 1.00 43.61 O
ATOM 4 OP2 U A2439 80.882 134.679 143.296 1.00 39.07 O
ATOM 5 O5' U A2439 78.750 135.184 142.098 1.00 42.98 O
ATOM 6 C5' U A2439 77.807 136.049 141.448 1.00 39.17 C
ATOM 7 C4' U A2439 76.630 135.256 140.961 1.00 37.30 C
ATOM 8 O4' U A2439 77.067 134.300 139.964 1.00 37.61 O
ATOM 9 C3' U A2439 75.939 134.405 142.005 1.00 35.85 C
ATOM 10 O3' U A2439 75.028 135.193 142.761 1.00 37.69 O
ATOM 11 C2' U A2439 75.222 133.386 141.135 1.00 36.14 C
ATOM 12 O2' U A2439 74.077 133.956 140.542 1.00 34.77 O
ATOM 13 C1' U A2439 76.265 133.137 140.043 1.00 37.44 C
ATOM 14 N1 U A2439 77.147 131.982 140.284 1.00 40.75 N
ATOM 15 C2 U A2439 76.664 130.709 139.979 1.00 42.02 C
ATOM 16 O2 U A2439 75.542 130.504 139.554 1.00 42.58 O
ATOM 17 N3 U A2439 77.551 129.684 140.202 1.00 42.55 N
ATOM 18 C4 U A2439 78.838 129.786 140.694 1.00 41.48 C
ATOM 19 O4 U A2439 79.529 128.768 140.802 1.00 41.23 O
ATOM 20 C5 U A2439 79.254 131.121 141.000 1.00 40.72 C
ATOM 21 C6 U A2439 78.419 132.146 140.789 1.00 40.38 C
ATOM 22 P A A2440 74.732 134.832 144.300 1.00 37.64 P
ATOM 23 OP1 A A2440 73.758 135.833 144.796 1.00 37.44 O
ATOM 24 OP2 A A2440 76.019 134.649 145.006 1.00 40.08 O
ATOM 25 O5' A A2440 73.996 133.426 144.241 1.00 37.17 O
TER

ATOM 1 O3' U B2439 75.028 135.193 142.761 1.00 37.69 O
ATOM 2 P A B2440 74.732 134.832 144.300 1.00 37.64 P
ATOM 3 OP1 A B2440 73.758 135.833 144.796 1.00 37.44 O
ATOM 4 OP2 A B2440 76.019 134.649 145.006 1.00 40.08 O
ATOM 5 O5' A B2440 73.996 133.426 144.241 1.00 37.17 O
ATOM 6 C5' A B2440 73.869 132.605 145.406 1.00 36.00 C
ATOM 7 C4' A B2440 72.845 131.531 145.159 1.00 37.40 C
ATOM 8 O4' A B2440 71.552 132.156 144.985 1.00 37.94 O
ATOM 9 C3' A B2440 73.064 130.721 143.891 1.00 37.45 C
ATOM 10 O3' A B2440 73.943 129.629 144.146 1.00 37.17 O
ATOM 11 C2' A B2440 71.655 130.262 143.541 1.00 37.89 C
ATOM 12 O2' A B2440 71.246 129.146 144.297 1.00 40.38 O
ATOM 13 C1' A B2440 70.821 131.463 143.992 1.00 39.23 C
ATOM 14 N9 A B2440 70.467 132.420 142.946 1.00 41.45 N
ATOM 15 C8 A B2440 71.217 133.468 142.469 1.00 42.39 C
ATOM 16 N7 A B2440 70.602 134.190 141.567 1.00 43.26 N
ATOM 17 C5 A B2440 69.366 133.571 141.434 1.00 43.39 C
ATOM 18 C6 A B2440 68.247 133.863 140.640 1.00 45.00 C
ATOM 19 N6 A B2440 68.182 134.913 139.812 1.00 46.76 N
ATOM 20 N1 A B2440 67.180 133.036 140.731 1.00 44.19 N
ATOM 21 C2 A B2440 67.241 132.004 141.574 1.00 42.44 C
ATOM 22 N3 A B2440 68.228 131.637 142.384 1.00 42.87 N
ATOM 23 C4 A B2440 69.276 132.470 142.263 1.00 42.71 C
ATOM 24 P A B2441 75.276 129.447 143.264 1.00 40.51 P
ATOM 25 OP1 A B2441 76.172 128.498 143.980 1.00 39.10 O
ATOM 26 OP2 A B2441 75.790 130.777 142.879 1.00 38.70 O
ATOM 27 O5' A B2441 74.756 128.724 141.947 1.00 40.57 O
TER

Atoms:
C4: (78.838,129.786,140.694)
N3: (77.551,129.684,140.202)
OP1: (79.498,136.768,143.839)
OP2: (80.882,134.679,143.296)
C2: (76.664,130.709,139.979)
C1': (76.265,133.137,140.043)
C3': (75.939,134.405,142.005)
O5': (78.750,135.184,142.098)
O4': (77.067,134.300,139.964)
C5': (77.807,136.049,141.448)
P: (80.012,135.792,142.850)
C4': (76.630,135.256,140.961)
C2': (75.222,133.386,141.135)
O2': (74.077,133.956,140.542)
N1: (77.147,131.982,140.284)
O4: (79.529,128.768,140.802)
O2: (75.542,130.504,139.554)
C6: (78.419,132.146,140.789)
C5: (79.254,131.121,141.000)
O3': (75.028,135.193,142.761)
OP1: (73.758,135.833,144.796)
OP2: (76.019,134.649,145.006)
C3': (73.064,130.721,143.891)
C1': (70.821,131.463,143.992)
C5': (73.869,132.605,145.406)
O4': (71.552,132.156,144.985)
C8: (71.217,133.468,142.469)
O2': (71.246,129.146,144.297)
C6: (68.247,133.863,140.640)
C5: (69.366,133.571,141.434)
C4: (69.276,132.470,142.263)
P: (74.732,134.832,144.300)
C4': (72.845,131.531,145.159)
C2': (71.655,130.262,143.541)
C2: (67.241,132.004,141.574)
N1: (67.180,133.036,140.731)
N3: (68.228,131.637,142.384)
N6: (68.182,134.913,139.812)
N7: (70.602,134.190,141.567)
N9: (70.467,132.420,142.946)
O5': (73.996,133.426,144.241)
O3': (73.943,129.629,144.146)
Image (generated by PyMOL):
PyMOL image
show in jmol