Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:G7:G13
Extra
PDB:
ATOM 1 O3' U A 6 40.351 -38.717 -6.818 1.00 37.51 O
ATOM 2 P C A 7 41.217 -37.768 -7.758 1.00 38.46 P
ATOM 3 OP1 C A 7 42.562 -38.334 -7.650 1.00 39.22 O
ATOM 4 OP2 C A 7 41.007 -36.332 -7.496 1.00 37.38 O
ATOM 5 O5' C A 7 40.648 -38.062 -9.224 1.00 40.71 O
ATOM 6 C5' C A 7 40.854 -39.331 -9.843 1.00 42.26 C
ATOM 7 C4' C A 7 39.939 -39.518 -11.034 1.00 42.55 C
ATOM 8 O4' C A 7 38.579 -39.359 -10.592 1.00 43.68 O
ATOM 9 C3' C A 7 40.015 -38.495 -12.116 1.00 42.64 C
ATOM 10 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 11 C2' C A 7 38.722 -38.772 -12.809 1.00 43.22 C
ATOM 12 O2' C A 7 38.916 -39.947 -13.535 1.00 42.92 O
ATOM 13 C1' C A 7 37.758 -38.954 -11.655 1.00 43.16 C
ATOM 14 N1 C A 7 37.079 -37.682 -11.308 1.00 42.85 N
ATOM 15 C2 C A 7 36.054 -37.230 -12.120 1.00 42.96 C
ATOM 16 O2 C A 7 35.733 -37.934 -13.069 1.00 43.01 O
ATOM 17 N3 C A 7 35.426 -36.060 -11.849 1.00 43.18 N
ATOM 18 C4 C A 7 35.807 -35.346 -10.799 1.00 43.49 C
ATOM 19 N4 C A 7 35.183 -34.196 -10.550 1.00 44.24 N
ATOM 20 C5 C A 7 36.850 -35.793 -9.949 1.00 43.79 C
ATOM 21 C6 C A 7 37.455 -36.950 -10.231 1.00 43.30 C
ATOM 22 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 23 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 24 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 25 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
TER
ATOM 1 O3' G B 12 27.444 -35.402 -17.629 1.00 47.69 O
ATOM 2 P A B 13 26.686 -36.236 -16.501 1.00 46.71 P
ATOM 3 OP1 A B 13 25.554 -36.945 -17.114 1.00 47.21 O
ATOM 4 OP2 A B 13 26.495 -35.335 -15.357 1.00 48.27 O
ATOM 5 O5' A B 13 27.717 -37.312 -15.972 1.00 45.71 O
ATOM 6 C5' A B 13 28.259 -38.254 -16.865 1.00 44.35 C
ATOM 7 C4' A B 13 29.343 -39.077 -16.200 1.00 42.78 C
ATOM 8 O4' A B 13 30.379 -38.211 -15.743 1.00 42.05 O
ATOM 9 C3' A B 13 28.915 -39.754 -14.938 1.00 41.83 C
ATOM 10 O3' A B 13 28.333 -40.937 -15.308 1.00 41.40 O
ATOM 11 C2' A B 13 30.218 -39.979 -14.226 1.00 40.59 C
ATOM 12 O2' A B 13 30.895 -41.068 -14.750 1.00 39.12 O
ATOM 13 C1' A B 13 30.972 -38.749 -14.599 1.00 39.89 C
ATOM 14 N9 A B 13 30.950 -37.711 -13.614 1.00 38.21 N
ATOM 15 C8 A B 13 30.327 -36.511 -13.683 1.00 38.58 C
ATOM 16 N7 A B 13 30.540 -35.763 -12.629 1.00 38.78 N
ATOM 17 C5 A B 13 31.357 -36.536 -11.845 1.00 37.65 C
ATOM 18 C6 A B 13 31.946 -36.320 -10.618 1.00 37.54 C
ATOM 19 N6 A B 13 31.759 -35.207 -9.946 1.00 39.21 N
ATOM 20 N1 A B 13 32.714 -37.267 -10.084 1.00 37.71 N
ATOM 21 C2 A B 13 32.892 -38.381 -10.777 1.00 38.25 C
ATOM 22 N3 A B 13 32.401 -38.710 -11.962 1.00 39.02 N
ATOM 23 C4 A B 13 31.628 -37.729 -12.438 1.00 38.41 C
ATOM 24 P C B 14 27.131 -41.511 -14.439 1.00 40.90 P
ATOM 25 OP1 C B 14 26.686 -42.705 -15.182 1.00 41.23 O
ATOM 26 OP2 C B 14 26.161 -40.452 -14.087 1.00 39.88 O
ATOM 27 O5' C B 14 27.934 -41.952 -13.130 1.00 38.11 O
TER
ATOM 2 P C A 7 41.217 -37.768 -7.758 1.00 38.46 P
ATOM 3 OP1 C A 7 42.562 -38.334 -7.650 1.00 39.22 O
ATOM 4 OP2 C A 7 41.007 -36.332 -7.496 1.00 37.38 O
ATOM 5 O5' C A 7 40.648 -38.062 -9.224 1.00 40.71 O
ATOM 6 C5' C A 7 40.854 -39.331 -9.843 1.00 42.26 C
ATOM 7 C4' C A 7 39.939 -39.518 -11.034 1.00 42.55 C
ATOM 8 O4' C A 7 38.579 -39.359 -10.592 1.00 43.68 O
ATOM 9 C3' C A 7 40.015 -38.495 -12.116 1.00 42.64 C
ATOM 10 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 11 C2' C A 7 38.722 -38.772 -12.809 1.00 43.22 C
ATOM 12 O2' C A 7 38.916 -39.947 -13.535 1.00 42.92 O
ATOM 13 C1' C A 7 37.758 -38.954 -11.655 1.00 43.16 C
ATOM 14 N1 C A 7 37.079 -37.682 -11.308 1.00 42.85 N
ATOM 15 C2 C A 7 36.054 -37.230 -12.120 1.00 42.96 C
ATOM 16 O2 C A 7 35.733 -37.934 -13.069 1.00 43.01 O
ATOM 17 N3 C A 7 35.426 -36.060 -11.849 1.00 43.18 N
ATOM 18 C4 C A 7 35.807 -35.346 -10.799 1.00 43.49 C
ATOM 19 N4 C A 7 35.183 -34.196 -10.550 1.00 44.24 N
ATOM 20 C5 C A 7 36.850 -35.793 -9.949 1.00 43.79 C
ATOM 21 C6 C A 7 37.455 -36.950 -10.231 1.00 43.30 C
ATOM 22 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 23 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 24 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 25 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
TER
ATOM 1 O3' G B 12 27.444 -35.402 -17.629 1.00 47.69 O
ATOM 2 P A B 13 26.686 -36.236 -16.501 1.00 46.71 P
ATOM 3 OP1 A B 13 25.554 -36.945 -17.114 1.00 47.21 O
ATOM 4 OP2 A B 13 26.495 -35.335 -15.357 1.00 48.27 O
ATOM 5 O5' A B 13 27.717 -37.312 -15.972 1.00 45.71 O
ATOM 6 C5' A B 13 28.259 -38.254 -16.865 1.00 44.35 C
ATOM 7 C4' A B 13 29.343 -39.077 -16.200 1.00 42.78 C
ATOM 8 O4' A B 13 30.379 -38.211 -15.743 1.00 42.05 O
ATOM 9 C3' A B 13 28.915 -39.754 -14.938 1.00 41.83 C
ATOM 10 O3' A B 13 28.333 -40.937 -15.308 1.00 41.40 O
ATOM 11 C2' A B 13 30.218 -39.979 -14.226 1.00 40.59 C
ATOM 12 O2' A B 13 30.895 -41.068 -14.750 1.00 39.12 O
ATOM 13 C1' A B 13 30.972 -38.749 -14.599 1.00 39.89 C
ATOM 14 N9 A B 13 30.950 -37.711 -13.614 1.00 38.21 N
ATOM 15 C8 A B 13 30.327 -36.511 -13.683 1.00 38.58 C
ATOM 16 N7 A B 13 30.540 -35.763 -12.629 1.00 38.78 N
ATOM 17 C5 A B 13 31.357 -36.536 -11.845 1.00 37.65 C
ATOM 18 C6 A B 13 31.946 -36.320 -10.618 1.00 37.54 C
ATOM 19 N6 A B 13 31.759 -35.207 -9.946 1.00 39.21 N
ATOM 20 N1 A B 13 32.714 -37.267 -10.084 1.00 37.71 N
ATOM 21 C2 A B 13 32.892 -38.381 -10.777 1.00 38.25 C
ATOM 22 N3 A B 13 32.401 -38.710 -11.962 1.00 39.02 N
ATOM 23 C4 A B 13 31.628 -37.729 -12.438 1.00 38.41 C
ATOM 24 P C B 14 27.131 -41.511 -14.439 1.00 40.90 P
ATOM 25 OP1 C B 14 26.686 -42.705 -15.182 1.00 41.23 O
ATOM 26 OP2 C B 14 26.161 -40.452 -14.087 1.00 39.88 O
ATOM 27 O5' C B 14 27.934 -41.952 -13.130 1.00 38.11 O
TER
Atoms:
C2: (36.054,-37.230,-12.120)
OP1: (42.562,-38.334,-7.650)
OP2: (41.007,-36.332,-7.496)
C4: (35.807,-35.346,-10.799)
O5': (40.648,-38.062,-9.224)
C3': (40.015,-38.495,-12.116)
C1': (37.758,-38.954,-11.655)
O4': (38.579,-39.359,-10.592)
C5': (40.854,-39.331,-9.843)
P: (41.217,-37.768,-7.758)
O2: (35.733,-37.934,-13.069)
C4': (39.939,-39.518,-11.034)
C2': (38.722,-38.772,-12.809)
O2': (38.916,-39.947,-13.535)
N1: (37.079,-37.682,-11.308)
N3: (35.426,-36.060,-11.849)
N4: (35.183,-34.196,-10.550)
C6: (37.455,-36.950,-10.231)
C5: (36.850,-35.793,-9.949)
O3': (41.023,-38.820,-12.974)
OP1: (42.562,-38.334,-7.650)
OP2: (41.007,-36.332,-7.496)
C4: (35.807,-35.346,-10.799)
O5': (40.648,-38.062,-9.224)
C3': (40.015,-38.495,-12.116)
C1': (37.758,-38.954,-11.655)
O4': (38.579,-39.359,-10.592)
C5': (40.854,-39.331,-9.843)
P: (41.217,-37.768,-7.758)
O2: (35.733,-37.934,-13.069)
C4': (39.939,-39.518,-11.034)
C2': (38.722,-38.772,-12.809)
O2': (38.916,-39.947,-13.535)
N1: (37.079,-37.682,-11.308)
N3: (35.426,-36.060,-11.849)
N4: (35.183,-34.196,-10.550)
C6: (37.455,-36.950,-10.231)
C5: (36.850,-35.793,-9.949)
O3': (41.023,-38.820,-12.974)
OP1: (25.554,-36.945,-17.114)
OP2: (26.495,-35.335,-15.357)
C3': (28.915,-39.754,-14.938)
C1': (30.972,-38.749,-14.599)
C5': (28.259,-38.254,-16.865)
O4': (30.379,-38.211,-15.743)
C8: (30.327,-36.511,-13.683)
O2': (30.895,-41.068,-14.750)
C6: (31.946,-36.320,-10.618)
C5: (31.357,-36.536,-11.845)
C4: (31.628,-37.729,-12.438)
P: (26.686,-36.236,-16.501)
C4': (29.343,-39.077,-16.200)
C2': (30.218,-39.979,-14.226)
C2: (32.892,-38.381,-10.777)
N1: (32.714,-37.267,-10.084)
N3: (32.401,-38.710,-11.962)
N6: (31.759,-35.207,-9.946)
N7: (30.540,-35.763,-12.629)
N9: (30.950,-37.711,-13.614)
O5': (27.717,-37.312,-15.972)
O3': (28.333,-40.937,-15.308)
OP2: (26.495,-35.335,-15.357)
C3': (28.915,-39.754,-14.938)
C1': (30.972,-38.749,-14.599)
C5': (28.259,-38.254,-16.865)
O4': (30.379,-38.211,-15.743)
C8: (30.327,-36.511,-13.683)
O2': (30.895,-41.068,-14.750)
C6: (31.946,-36.320,-10.618)
C5: (31.357,-36.536,-11.845)
C4: (31.628,-37.729,-12.438)
P: (26.686,-36.236,-16.501)
C4': (29.343,-39.077,-16.200)
C2': (30.218,-39.979,-14.226)
C2: (32.892,-38.381,-10.777)
N1: (32.714,-37.267,-10.084)
N3: (32.401,-38.710,-11.962)
N6: (31.759,-35.207,-9.946)
N7: (30.540,-35.763,-12.629)
N9: (30.950,-37.711,-13.614)
O5': (27.717,-37.312,-15.972)
O3': (28.333,-40.937,-15.308)
Image (generated by PyMOL):