Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2440:A2441
Extra
PDB:
ATOM 1 O3' U A2439 -84.039 -43.840 -39.727 1.00 16.41 O
ATOM 2 P U A2440 -85.240 -44.506 -40.565 1.00 5.31 P
ATOM 3 OP1 U A2440 -84.660 -44.917 -41.865 1.00 47.69 O
ATOM 4 OP2 U A2440 -86.438 -43.620 -40.533 1.00 47.69 O
ATOM 5 O5' U A2440 -85.639 -45.801 -39.732 1.00 31.41 O
ATOM 6 C5' U A2440 -84.653 -46.753 -39.309 1.00 31.41 C
ATOM 7 C4' U A2440 -85.290 -47.799 -38.423 1.00 31.41 C
ATOM 8 O4' U A2440 -85.784 -47.193 -37.197 1.00 31.41 O
ATOM 9 C3' U A2440 -86.529 -48.468 -38.989 1.00 31.41 C
ATOM 10 O3' U A2440 -86.182 -49.508 -39.901 1.00 31.41 O
ATOM 11 C2' U A2440 -87.233 -49.003 -37.742 1.00 31.41 C
ATOM 12 O2' U A2440 -86.754 -50.276 -37.379 1.00 31.41 O
ATOM 13 C1' U A2440 -86.810 -48.002 -36.662 1.00 31.41 C
ATOM 14 N1 U A2440 -87.898 -47.163 -36.134 1.00 12.08 N
ATOM 15 C2 U A2440 -88.607 -47.655 -35.052 1.00 12.08 C
ATOM 16 O2 U A2440 -88.314 -48.686 -34.480 1.00 12.08 O
ATOM 17 N3 U A2440 -89.666 -46.891 -34.649 1.00 12.08 N
ATOM 18 C4 U A2440 -90.064 -45.698 -35.179 1.00 12.08 C
ATOM 19 O4 U A2440 -91.074 -45.156 -34.737 1.00 12.08 O
ATOM 20 C5 U A2440 -89.258 -45.225 -36.260 1.00 12.08 C
ATOM 21 C6 U A2440 -88.227 -45.959 -36.690 1.00 12.08 C
ATOM 22 P A A2441 -87.152 -49.826 -41.139 1.00 10.14 P
ATOM 23 OP1 A A2441 -86.521 -50.904 -41.931 1.00 20.16 O
ATOM 24 OP2 A A2441 -87.490 -48.545 -41.781 1.00 20.16 O
ATOM 25 O5' A A2441 -88.460 -50.398 -40.445 1.00 9.98 O
TER
ATOM 1 O3' U B2440 -86.182 -49.508 -39.901 1.00 31.41 O
ATOM 2 P A B2441 -87.152 -49.826 -41.139 1.00 10.14 P
ATOM 3 OP1 A B2441 -86.521 -50.904 -41.931 1.00 20.16 O
ATOM 4 OP2 A B2441 -87.490 -48.545 -41.781 1.00 20.16 O
ATOM 5 O5' A B2441 -88.460 -50.398 -40.445 1.00 9.98 O
ATOM 6 C5' A B2441 -89.709 -50.379 -41.117 1.00 9.98 C
ATOM 7 C4' A B2441 -90.679 -51.282 -40.404 1.00 9.98 C
ATOM 8 O4' A B2441 -90.220 -52.646 -40.509 1.00 9.98 O
ATOM 9 C3' A B2441 -90.791 -51.012 -38.918 1.00 9.98 C
ATOM 10 O3' A B2441 -91.791 -50.022 -38.703 1.00 9.98 O
ATOM 11 C2' A B2441 -91.173 -52.376 -38.350 1.00 9.98 C
ATOM 12 O2' A B2441 -92.555 -52.673 -38.443 1.00 9.98 O
ATOM 13 C1' A B2441 -90.441 -53.322 -39.295 1.00 9.98 C
ATOM 14 N9 A B2441 -89.141 -53.767 -38.838 1.00 3.87 N
ATOM 15 C8 A B2441 -87.948 -53.117 -39.044 1.00 3.87 C
ATOM 16 N7 A B2441 -86.896 -53.805 -38.663 1.00 3.87 N
ATOM 17 C5 A B2441 -87.438 -54.969 -38.147 1.00 3.87 C
ATOM 18 C6 A B2441 -86.850 -56.093 -37.631 1.00 3.87 C
ATOM 19 N6 A B2441 -85.529 -56.243 -37.570 1.00 3.87 N
ATOM 20 N1 A B2441 -87.661 -57.080 -37.182 1.00 3.87 N
ATOM 21 C2 A B2441 -88.990 -56.912 -37.273 1.00 3.87 C
ATOM 22 N3 A B2441 -89.670 -55.889 -37.766 1.00 3.87 N
ATOM 23 C4 A B2441 -88.825 -54.939 -38.202 1.00 3.87 C
ATOM 24 P A B2442 -91.417 -48.663 -37.934 1.00 16.13 P
ATOM 25 OP1 A B2442 -92.535 -47.723 -38.202 1.00 0.79 O
ATOM 26 OP2 A B2442 -90.024 -48.274 -38.300 1.00 0.79 O
ATOM 27 O5' A B2442 -91.500 -49.109 -36.401 1.00 19.26 O
TER
ATOM 2 P U A2440 -85.240 -44.506 -40.565 1.00 5.31 P
ATOM 3 OP1 U A2440 -84.660 -44.917 -41.865 1.00 47.69 O
ATOM 4 OP2 U A2440 -86.438 -43.620 -40.533 1.00 47.69 O
ATOM 5 O5' U A2440 -85.639 -45.801 -39.732 1.00 31.41 O
ATOM 6 C5' U A2440 -84.653 -46.753 -39.309 1.00 31.41 C
ATOM 7 C4' U A2440 -85.290 -47.799 -38.423 1.00 31.41 C
ATOM 8 O4' U A2440 -85.784 -47.193 -37.197 1.00 31.41 O
ATOM 9 C3' U A2440 -86.529 -48.468 -38.989 1.00 31.41 C
ATOM 10 O3' U A2440 -86.182 -49.508 -39.901 1.00 31.41 O
ATOM 11 C2' U A2440 -87.233 -49.003 -37.742 1.00 31.41 C
ATOM 12 O2' U A2440 -86.754 -50.276 -37.379 1.00 31.41 O
ATOM 13 C1' U A2440 -86.810 -48.002 -36.662 1.00 31.41 C
ATOM 14 N1 U A2440 -87.898 -47.163 -36.134 1.00 12.08 N
ATOM 15 C2 U A2440 -88.607 -47.655 -35.052 1.00 12.08 C
ATOM 16 O2 U A2440 -88.314 -48.686 -34.480 1.00 12.08 O
ATOM 17 N3 U A2440 -89.666 -46.891 -34.649 1.00 12.08 N
ATOM 18 C4 U A2440 -90.064 -45.698 -35.179 1.00 12.08 C
ATOM 19 O4 U A2440 -91.074 -45.156 -34.737 1.00 12.08 O
ATOM 20 C5 U A2440 -89.258 -45.225 -36.260 1.00 12.08 C
ATOM 21 C6 U A2440 -88.227 -45.959 -36.690 1.00 12.08 C
ATOM 22 P A A2441 -87.152 -49.826 -41.139 1.00 10.14 P
ATOM 23 OP1 A A2441 -86.521 -50.904 -41.931 1.00 20.16 O
ATOM 24 OP2 A A2441 -87.490 -48.545 -41.781 1.00 20.16 O
ATOM 25 O5' A A2441 -88.460 -50.398 -40.445 1.00 9.98 O
TER
ATOM 1 O3' U B2440 -86.182 -49.508 -39.901 1.00 31.41 O
ATOM 2 P A B2441 -87.152 -49.826 -41.139 1.00 10.14 P
ATOM 3 OP1 A B2441 -86.521 -50.904 -41.931 1.00 20.16 O
ATOM 4 OP2 A B2441 -87.490 -48.545 -41.781 1.00 20.16 O
ATOM 5 O5' A B2441 -88.460 -50.398 -40.445 1.00 9.98 O
ATOM 6 C5' A B2441 -89.709 -50.379 -41.117 1.00 9.98 C
ATOM 7 C4' A B2441 -90.679 -51.282 -40.404 1.00 9.98 C
ATOM 8 O4' A B2441 -90.220 -52.646 -40.509 1.00 9.98 O
ATOM 9 C3' A B2441 -90.791 -51.012 -38.918 1.00 9.98 C
ATOM 10 O3' A B2441 -91.791 -50.022 -38.703 1.00 9.98 O
ATOM 11 C2' A B2441 -91.173 -52.376 -38.350 1.00 9.98 C
ATOM 12 O2' A B2441 -92.555 -52.673 -38.443 1.00 9.98 O
ATOM 13 C1' A B2441 -90.441 -53.322 -39.295 1.00 9.98 C
ATOM 14 N9 A B2441 -89.141 -53.767 -38.838 1.00 3.87 N
ATOM 15 C8 A B2441 -87.948 -53.117 -39.044 1.00 3.87 C
ATOM 16 N7 A B2441 -86.896 -53.805 -38.663 1.00 3.87 N
ATOM 17 C5 A B2441 -87.438 -54.969 -38.147 1.00 3.87 C
ATOM 18 C6 A B2441 -86.850 -56.093 -37.631 1.00 3.87 C
ATOM 19 N6 A B2441 -85.529 -56.243 -37.570 1.00 3.87 N
ATOM 20 N1 A B2441 -87.661 -57.080 -37.182 1.00 3.87 N
ATOM 21 C2 A B2441 -88.990 -56.912 -37.273 1.00 3.87 C
ATOM 22 N3 A B2441 -89.670 -55.889 -37.766 1.00 3.87 N
ATOM 23 C4 A B2441 -88.825 -54.939 -38.202 1.00 3.87 C
ATOM 24 P A B2442 -91.417 -48.663 -37.934 1.00 16.13 P
ATOM 25 OP1 A B2442 -92.535 -47.723 -38.202 1.00 0.79 O
ATOM 26 OP2 A B2442 -90.024 -48.274 -38.300 1.00 0.79 O
ATOM 27 O5' A B2442 -91.500 -49.109 -36.401 1.00 19.26 O
TER
Atoms:
C4: (-90.064,-45.698,-35.179)
N3: (-89.666,-46.891,-34.649)
OP1: (-84.660,-44.917,-41.865)
OP2: (-86.438,-43.620,-40.533)
C2: (-88.607,-47.655,-35.052)
C1': (-86.810,-48.002,-36.662)
C3': (-86.529,-48.468,-38.989)
O5': (-85.639,-45.801,-39.732)
O4': (-85.784,-47.193,-37.197)
C5': (-84.653,-46.753,-39.309)
P: (-85.240,-44.506,-40.565)
C4': (-85.290,-47.799,-38.423)
C2': (-87.233,-49.003,-37.742)
O2': (-86.754,-50.276,-37.379)
N1: (-87.898,-47.163,-36.134)
O4: (-91.074,-45.156,-34.737)
O2: (-88.314,-48.686,-34.480)
C6: (-88.227,-45.959,-36.690)
C5: (-89.258,-45.225,-36.260)
O3': (-86.182,-49.508,-39.901)
N3: (-89.666,-46.891,-34.649)
OP1: (-84.660,-44.917,-41.865)
OP2: (-86.438,-43.620,-40.533)
C2: (-88.607,-47.655,-35.052)
C1': (-86.810,-48.002,-36.662)
C3': (-86.529,-48.468,-38.989)
O5': (-85.639,-45.801,-39.732)
O4': (-85.784,-47.193,-37.197)
C5': (-84.653,-46.753,-39.309)
P: (-85.240,-44.506,-40.565)
C4': (-85.290,-47.799,-38.423)
C2': (-87.233,-49.003,-37.742)
O2': (-86.754,-50.276,-37.379)
N1: (-87.898,-47.163,-36.134)
O4: (-91.074,-45.156,-34.737)
O2: (-88.314,-48.686,-34.480)
C6: (-88.227,-45.959,-36.690)
C5: (-89.258,-45.225,-36.260)
O3': (-86.182,-49.508,-39.901)
OP1: (-86.521,-50.904,-41.931)
OP2: (-87.490,-48.545,-41.781)
C3': (-90.791,-51.012,-38.918)
C1': (-90.441,-53.322,-39.295)
C5': (-89.709,-50.379,-41.117)
O4': (-90.220,-52.646,-40.509)
C8: (-87.948,-53.117,-39.044)
O2': (-92.555,-52.673,-38.443)
C6: (-86.850,-56.093,-37.631)
C5: (-87.438,-54.969,-38.147)
C4: (-88.825,-54.939,-38.202)
P: (-87.152,-49.826,-41.139)
C4': (-90.679,-51.282,-40.404)
C2': (-91.173,-52.376,-38.350)
C2: (-88.990,-56.912,-37.273)
N1: (-87.661,-57.080,-37.182)
N3: (-89.670,-55.889,-37.766)
N6: (-85.529,-56.243,-37.570)
N7: (-86.896,-53.805,-38.663)
N9: (-89.141,-53.767,-38.838)
O5': (-88.460,-50.398,-40.445)
O3': (-91.791,-50.022,-38.703)
OP2: (-87.490,-48.545,-41.781)
C3': (-90.791,-51.012,-38.918)
C1': (-90.441,-53.322,-39.295)
C5': (-89.709,-50.379,-41.117)
O4': (-90.220,-52.646,-40.509)
C8: (-87.948,-53.117,-39.044)
O2': (-92.555,-52.673,-38.443)
C6: (-86.850,-56.093,-37.631)
C5: (-87.438,-54.969,-38.147)
C4: (-88.825,-54.939,-38.202)
P: (-87.152,-49.826,-41.139)
C4': (-90.679,-51.282,-40.404)
C2': (-91.173,-52.376,-38.350)
C2: (-88.990,-56.912,-37.273)
N1: (-87.661,-57.080,-37.182)
N3: (-89.670,-55.889,-37.766)
N6: (-85.529,-56.243,-37.570)
N7: (-86.896,-53.805,-38.663)
N9: (-89.141,-53.767,-38.838)
O5': (-88.460,-50.398,-40.445)
O3': (-91.791,-50.022,-38.703)
Image (generated by PyMOL):