Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1340:A1341
Extra
PDB:
ATOM 1 O3' U A1339 -2.345 -62.154 17.051 1.00 39.47 O
ATOM 2 P U A1340 -3.116 -62.943 15.894 1.00 35.87 P
ATOM 3 OP1 U A1340 -2.149 -63.899 15.309 1.00 40.40 O
ATOM 4 OP2 U A1340 -3.830 -61.985 14.996 1.00 40.40 O
ATOM 5 O5' U A1340 -4.170 -63.785 16.730 1.00 52.76 O
ATOM 6 C5' U A1340 -3.759 -64.433 17.941 1.00 52.76 C
ATOM 7 C4' U A1340 -4.955 -64.757 18.794 1.00 52.76 C
ATOM 8 O4' U A1340 -5.483 -63.562 19.430 1.00 52.76 O
ATOM 9 C3' U A1340 -6.135 -65.377 18.064 1.00 52.76 C
ATOM 10 O3' U A1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 11 C2' U A1340 -7.298 -65.058 19.006 1.00 52.76 C
ATOM 12 O2' U A1340 -7.400 -65.994 20.071 1.00 52.76 O
ATOM 13 C1' U A1340 -6.890 -63.690 19.575 1.00 52.76 C
ATOM 14 N1 U A1340 -7.539 -62.547 18.910 1.00 38.29 N
ATOM 15 C2 U A1340 -8.852 -62.247 19.235 1.00 38.12 C
ATOM 16 O2 U A1340 -9.504 -62.870 20.045 1.00 38.08 O
ATOM 17 N3 U A1340 -9.378 -61.175 18.569 1.00 38.08 N
ATOM 18 C4 U A1340 -8.745 -60.380 17.639 1.00 38.16 C
ATOM 19 O4 U A1340 -9.351 -59.432 17.142 1.00 38.28 O
ATOM 20 C5 U A1340 -7.401 -60.748 17.359 1.00 38.01 C
ATOM 21 C6 U A1340 -6.858 -61.794 17.986 1.00 38.08 C
ATOM 22 P A A1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 23 OP1 A A1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 24 OP2 A A1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 25 O5' A A1341 -7.948 -67.373 16.476 1.00 18.45 O
TER
ATOM 1 O3' U B1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 2 P A B1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 3 OP1 A B1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 4 OP2 A B1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 5 O5' A B1341 -7.948 -67.373 16.476 1.00 18.45 O
ATOM 6 C5' A B1341 -8.720 -67.654 15.287 1.00 18.45 C
ATOM 7 C4' A B1341 -10.181 -67.775 15.646 1.00 18.45 C
ATOM 8 O4' A B1341 -10.389 -68.987 16.399 1.00 18.45 O
ATOM 9 C3' A B1341 -10.663 -66.650 16.542 1.00 18.45 C
ATOM 10 O3' A B1341 -11.115 -65.576 15.721 1.00 18.45 O
ATOM 11 C2' A B1341 -11.759 -67.298 17.384 1.00 18.45 C
ATOM 12 O2' A B1341 -13.025 -67.269 16.760 1.00 18.45 O
ATOM 13 C1' A B1341 -11.274 -68.749 17.470 1.00 18.45 C
ATOM 14 N9 A B1341 -10.571 -69.137 18.688 1.00 30.03 N
ATOM 15 C8 A B1341 -9.266 -68.871 19.021 1.00 30.07 C
ATOM 16 N7 A B1341 -8.890 -69.410 20.154 1.00 30.08 N
ATOM 17 C5 A B1341 -10.029 -70.062 20.604 1.00 30.17 C
ATOM 18 C6 A B1341 -10.285 -70.829 21.752 1.00 30.26 C
ATOM 19 N6 A B1341 -9.369 -71.090 22.684 1.00 30.27 N
ATOM 20 N1 A B1341 -11.530 -71.329 21.909 1.00 30.22 N
ATOM 21 C2 A B1341 -12.444 -71.075 20.962 1.00 30.20 C
ATOM 22 N3 A B1341 -12.320 -70.376 19.836 1.00 30.24 N
ATOM 23 C4 A B1341 -11.075 -69.890 19.717 1.00 30.11 C
ATOM 24 P A B1342 -10.830 -64.062 16.167 1.00 29.08 P
ATOM 25 OP1 A B1342 -11.272 -63.208 15.036 1.00 34.85 O
ATOM 26 OP2 A B1342 -9.434 -63.939 16.682 1.00 34.85 O
ATOM 27 O5' A B1342 -11.855 -63.880 17.373 1.00 9.40 O
TER
ATOM 2 P U A1340 -3.116 -62.943 15.894 1.00 35.87 P
ATOM 3 OP1 U A1340 -2.149 -63.899 15.309 1.00 40.40 O
ATOM 4 OP2 U A1340 -3.830 -61.985 14.996 1.00 40.40 O
ATOM 5 O5' U A1340 -4.170 -63.785 16.730 1.00 52.76 O
ATOM 6 C5' U A1340 -3.759 -64.433 17.941 1.00 52.76 C
ATOM 7 C4' U A1340 -4.955 -64.757 18.794 1.00 52.76 C
ATOM 8 O4' U A1340 -5.483 -63.562 19.430 1.00 52.76 O
ATOM 9 C3' U A1340 -6.135 -65.377 18.064 1.00 52.76 C
ATOM 10 O3' U A1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 11 C2' U A1340 -7.298 -65.058 19.006 1.00 52.76 C
ATOM 12 O2' U A1340 -7.400 -65.994 20.071 1.00 52.76 O
ATOM 13 C1' U A1340 -6.890 -63.690 19.575 1.00 52.76 C
ATOM 14 N1 U A1340 -7.539 -62.547 18.910 1.00 38.29 N
ATOM 15 C2 U A1340 -8.852 -62.247 19.235 1.00 38.12 C
ATOM 16 O2 U A1340 -9.504 -62.870 20.045 1.00 38.08 O
ATOM 17 N3 U A1340 -9.378 -61.175 18.569 1.00 38.08 N
ATOM 18 C4 U A1340 -8.745 -60.380 17.639 1.00 38.16 C
ATOM 19 O4 U A1340 -9.351 -59.432 17.142 1.00 38.28 O
ATOM 20 C5 U A1340 -7.401 -60.748 17.359 1.00 38.01 C
ATOM 21 C6 U A1340 -6.858 -61.794 17.986 1.00 38.08 C
ATOM 22 P A A1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 23 OP1 A A1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 24 OP2 A A1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 25 O5' A A1341 -7.948 -67.373 16.476 1.00 18.45 O
TER
ATOM 1 O3' U B1340 -5.935 -66.784 17.879 1.00 52.76 O
ATOM 2 P A B1341 -6.357 -67.484 16.489 1.00 39.95 P
ATOM 3 OP1 A B1341 -6.021 -68.919 16.626 1.00 58.07 O
ATOM 4 OP2 A B1341 -5.806 -66.703 15.343 1.00 58.13 O
ATOM 5 O5' A B1341 -7.948 -67.373 16.476 1.00 18.45 O
ATOM 6 C5' A B1341 -8.720 -67.654 15.287 1.00 18.45 C
ATOM 7 C4' A B1341 -10.181 -67.775 15.646 1.00 18.45 C
ATOM 8 O4' A B1341 -10.389 -68.987 16.399 1.00 18.45 O
ATOM 9 C3' A B1341 -10.663 -66.650 16.542 1.00 18.45 C
ATOM 10 O3' A B1341 -11.115 -65.576 15.721 1.00 18.45 O
ATOM 11 C2' A B1341 -11.759 -67.298 17.384 1.00 18.45 C
ATOM 12 O2' A B1341 -13.025 -67.269 16.760 1.00 18.45 O
ATOM 13 C1' A B1341 -11.274 -68.749 17.470 1.00 18.45 C
ATOM 14 N9 A B1341 -10.571 -69.137 18.688 1.00 30.03 N
ATOM 15 C8 A B1341 -9.266 -68.871 19.021 1.00 30.07 C
ATOM 16 N7 A B1341 -8.890 -69.410 20.154 1.00 30.08 N
ATOM 17 C5 A B1341 -10.029 -70.062 20.604 1.00 30.17 C
ATOM 18 C6 A B1341 -10.285 -70.829 21.752 1.00 30.26 C
ATOM 19 N6 A B1341 -9.369 -71.090 22.684 1.00 30.27 N
ATOM 20 N1 A B1341 -11.530 -71.329 21.909 1.00 30.22 N
ATOM 21 C2 A B1341 -12.444 -71.075 20.962 1.00 30.20 C
ATOM 22 N3 A B1341 -12.320 -70.376 19.836 1.00 30.24 N
ATOM 23 C4 A B1341 -11.075 -69.890 19.717 1.00 30.11 C
ATOM 24 P A B1342 -10.830 -64.062 16.167 1.00 29.08 P
ATOM 25 OP1 A B1342 -11.272 -63.208 15.036 1.00 34.85 O
ATOM 26 OP2 A B1342 -9.434 -63.939 16.682 1.00 34.85 O
ATOM 27 O5' A B1342 -11.855 -63.880 17.373 1.00 9.40 O
TER
Atoms:
C4: (-8.745,-60.380,17.639)
N3: (-9.378,-61.175,18.569)
OP1: (-2.149,-63.899,15.309)
OP2: (-3.830,-61.985,14.996)
C2: (-8.852,-62.247,19.235)
C1': (-6.890,-63.690,19.575)
C3': (-6.135,-65.377,18.064)
O5': (-4.170,-63.785,16.730)
O4': (-5.483,-63.562,19.430)
C5': (-3.759,-64.433,17.941)
P: (-3.116,-62.943,15.894)
C4': (-4.955,-64.757,18.794)
C2': (-7.298,-65.058,19.006)
O2': (-7.400,-65.994,20.071)
N1: (-7.539,-62.547,18.910)
O4: (-9.351,-59.432,17.142)
O2: (-9.504,-62.870,20.045)
C6: (-6.858,-61.794,17.986)
C5: (-7.401,-60.748,17.359)
O3': (-5.935,-66.784,17.879)
N3: (-9.378,-61.175,18.569)
OP1: (-2.149,-63.899,15.309)
OP2: (-3.830,-61.985,14.996)
C2: (-8.852,-62.247,19.235)
C1': (-6.890,-63.690,19.575)
C3': (-6.135,-65.377,18.064)
O5': (-4.170,-63.785,16.730)
O4': (-5.483,-63.562,19.430)
C5': (-3.759,-64.433,17.941)
P: (-3.116,-62.943,15.894)
C4': (-4.955,-64.757,18.794)
C2': (-7.298,-65.058,19.006)
O2': (-7.400,-65.994,20.071)
N1: (-7.539,-62.547,18.910)
O4: (-9.351,-59.432,17.142)
O2: (-9.504,-62.870,20.045)
C6: (-6.858,-61.794,17.986)
C5: (-7.401,-60.748,17.359)
O3': (-5.935,-66.784,17.879)
OP1: (-6.021,-68.919,16.626)
OP2: (-5.806,-66.703,15.343)
C3': (-10.663,-66.650,16.542)
C1': (-11.274,-68.749,17.470)
C5': (-8.720,-67.654,15.287)
O4': (-10.389,-68.987,16.399)
C8: (-9.266,-68.871,19.021)
O2': (-13.025,-67.269,16.760)
C6: (-10.285,-70.829,21.752)
C5: (-10.029,-70.062,20.604)
C4: (-11.075,-69.890,19.717)
P: (-6.357,-67.484,16.489)
C4': (-10.181,-67.775,15.646)
C2': (-11.759,-67.298,17.384)
C2: (-12.444,-71.075,20.962)
N1: (-11.530,-71.329,21.909)
N3: (-12.320,-70.376,19.836)
N6: (-9.369,-71.090,22.684)
N7: (-8.890,-69.410,20.154)
N9: (-10.571,-69.137,18.688)
O5': (-7.948,-67.373,16.476)
O3': (-11.115,-65.576,15.721)
OP2: (-5.806,-66.703,15.343)
C3': (-10.663,-66.650,16.542)
C1': (-11.274,-68.749,17.470)
C5': (-8.720,-67.654,15.287)
O4': (-10.389,-68.987,16.399)
C8: (-9.266,-68.871,19.021)
O2': (-13.025,-67.269,16.760)
C6: (-10.285,-70.829,21.752)
C5: (-10.029,-70.062,20.604)
C4: (-11.075,-69.890,19.717)
P: (-6.357,-67.484,16.489)
C4': (-10.181,-67.775,15.646)
C2': (-11.759,-67.298,17.384)
C2: (-12.444,-71.075,20.962)
N1: (-11.530,-71.329,21.909)
N3: (-12.320,-70.376,19.836)
N6: (-9.369,-71.090,22.684)
N7: (-8.890,-69.410,20.154)
N9: (-10.571,-69.137,18.688)
O5': (-7.948,-67.373,16.476)
O3': (-11.115,-65.576,15.721)
Image (generated by PyMOL):