Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21118:21119
Extra
PDB:
ATOM 1 O3' U A1117 -52.462 8.745 62.971 1.00 55.22 O
ATOM 2 P U A1118 -53.679 8.900 61.958 1.00 63.27 P
ATOM 3 OP1 U A1118 -53.426 7.937 60.850 1.00 63.27 O
ATOM 4 OP2 U A1118 -53.822 10.343 61.646 1.00 63.51 O
ATOM 5 O5' U A1118 -54.891 8.402 62.834 1.00 63.41 O
ATOM 6 C5' U A1118 -54.816 7.141 63.469 1.00 63.21 C
ATOM 7 C4' U A1118 -55.705 7.062 64.672 1.00 63.30 C
ATOM 8 O4' U A1118 -55.253 7.985 65.686 1.00 63.15 O
ATOM 9 C3' U A1118 -57.163 7.431 64.454 1.00 63.74 C
ATOM 10 O3' U A1118 -57.904 6.383 63.849 1.00 63.93 O
ATOM 11 C2' U A1118 -57.627 7.773 65.860 1.00 63.76 C
ATOM 12 O2' U A1118 -57.933 6.588 66.578 1.00 63.69 O
ATOM 13 C1' U A1118 -56.355 8.400 66.464 1.00 63.40 C
ATOM 14 N1 U A1118 -56.393 9.901 66.490 1.00 63.54 N
ATOM 15 C2 U A1118 -57.085 10.464 67.546 1.00 63.69 C
ATOM 16 O2 U A1118 -57.659 9.775 68.389 1.00 63.71 O
ATOM 17 N3 U A1118 -57.067 11.840 67.543 1.00 63.82 N
ATOM 18 C4 U A1118 -56.451 12.682 66.634 1.00 63.83 C
ATOM 19 O4 U A1118 -56.535 13.899 66.791 1.00 63.97 O
ATOM 20 C5 U A1118 -55.752 12.035 65.574 1.00 63.68 C
ATOM 21 C6 U A1118 -55.749 10.698 65.550 1.00 63.54 C
ATOM 22 P A A1119 -59.300 6.681 63.125 1.00 71.51 P
ATOM 23 OP1 A A1119 -59.493 5.629 62.096 1.00 71.59 O
ATOM 24 OP2 A A1119 -59.289 8.103 62.695 1.00 71.70 O
ATOM 25 O5' A A1119 -60.339 6.471 64.309 1.00 71.67 O
TER
ATOM 1 O3' U B1118 -57.904 6.383 63.849 1.00 63.93 O
ATOM 2 P A B1119 -59.300 6.681 63.125 1.00 71.51 P
ATOM 3 OP1 A B1119 -59.493 5.629 62.096 1.00 71.59 O
ATOM 4 OP2 A B1119 -59.289 8.103 62.695 1.00 71.70 O
ATOM 5 O5' A B1119 -60.339 6.471 64.309 1.00 71.67 O
ATOM 6 C5' A B1119 -60.489 5.193 64.924 1.00 71.55 C
ATOM 7 C4' A B1119 -61.787 5.077 65.678 1.00 71.88 C
ATOM 8 O4' A B1119 -61.879 6.169 66.623 1.00 71.92 O
ATOM 9 C3' A B1119 -63.033 5.200 64.839 1.00 72.38 C
ATOM 10 O3' A B1119 -64.117 4.673 65.616 1.00 72.63 O
ATOM 11 C2' A B1119 -63.164 6.717 64.769 1.00 72.56 C
ATOM 12 O2' A B1119 -64.396 7.202 64.286 1.00 73.09 O
ATOM 13 C1' A B1119 -62.937 7.037 66.235 1.00 72.37 C
ATOM 14 N9 A B1119 -62.501 8.394 66.531 1.00 72.32 N
ATOM 15 C8 A B1119 -61.490 9.113 65.959 1.00 72.11 C
ATOM 16 N7 A B1119 -61.280 10.266 66.543 1.00 72.11 N
ATOM 17 C5 A B1119 -62.168 10.283 67.606 1.00 72.30 C
ATOM 18 C6 A B1119 -62.406 11.230 68.611 1.00 72.39 C
ATOM 19 N6 A B1119 -61.767 12.389 68.721 1.00 72.29 N
ATOM 20 N1 A B1119 -63.362 10.920 69.506 1.00 72.61 N
ATOM 21 C2 A B1119 -64.009 9.733 69.404 1.00 72.73 C
ATOM 22 N3 A B1119 -63.869 8.760 68.508 1.00 72.66 N
ATOM 23 C4 A B1119 -62.922 9.117 67.622 1.00 72.44 C
ATOM 24 P A B1120 -64.840 3.295 65.206 1.00 62.51 P
ATOM 25 OP1 A B1120 -64.032 2.693 64.109 1.00 62.28 O
ATOM 26 OP2 A B1120 -66.238 3.623 64.965 1.00 63.05 O
ATOM 27 O5' A B1120 -64.730 2.400 66.495 1.00 62.31 O
TER
ATOM 2 P U A1118 -53.679 8.900 61.958 1.00 63.27 P
ATOM 3 OP1 U A1118 -53.426 7.937 60.850 1.00 63.27 O
ATOM 4 OP2 U A1118 -53.822 10.343 61.646 1.00 63.51 O
ATOM 5 O5' U A1118 -54.891 8.402 62.834 1.00 63.41 O
ATOM 6 C5' U A1118 -54.816 7.141 63.469 1.00 63.21 C
ATOM 7 C4' U A1118 -55.705 7.062 64.672 1.00 63.30 C
ATOM 8 O4' U A1118 -55.253 7.985 65.686 1.00 63.15 O
ATOM 9 C3' U A1118 -57.163 7.431 64.454 1.00 63.74 C
ATOM 10 O3' U A1118 -57.904 6.383 63.849 1.00 63.93 O
ATOM 11 C2' U A1118 -57.627 7.773 65.860 1.00 63.76 C
ATOM 12 O2' U A1118 -57.933 6.588 66.578 1.00 63.69 O
ATOM 13 C1' U A1118 -56.355 8.400 66.464 1.00 63.40 C
ATOM 14 N1 U A1118 -56.393 9.901 66.490 1.00 63.54 N
ATOM 15 C2 U A1118 -57.085 10.464 67.546 1.00 63.69 C
ATOM 16 O2 U A1118 -57.659 9.775 68.389 1.00 63.71 O
ATOM 17 N3 U A1118 -57.067 11.840 67.543 1.00 63.82 N
ATOM 18 C4 U A1118 -56.451 12.682 66.634 1.00 63.83 C
ATOM 19 O4 U A1118 -56.535 13.899 66.791 1.00 63.97 O
ATOM 20 C5 U A1118 -55.752 12.035 65.574 1.00 63.68 C
ATOM 21 C6 U A1118 -55.749 10.698 65.550 1.00 63.54 C
ATOM 22 P A A1119 -59.300 6.681 63.125 1.00 71.51 P
ATOM 23 OP1 A A1119 -59.493 5.629 62.096 1.00 71.59 O
ATOM 24 OP2 A A1119 -59.289 8.103 62.695 1.00 71.70 O
ATOM 25 O5' A A1119 -60.339 6.471 64.309 1.00 71.67 O
TER
ATOM 1 O3' U B1118 -57.904 6.383 63.849 1.00 63.93 O
ATOM 2 P A B1119 -59.300 6.681 63.125 1.00 71.51 P
ATOM 3 OP1 A B1119 -59.493 5.629 62.096 1.00 71.59 O
ATOM 4 OP2 A B1119 -59.289 8.103 62.695 1.00 71.70 O
ATOM 5 O5' A B1119 -60.339 6.471 64.309 1.00 71.67 O
ATOM 6 C5' A B1119 -60.489 5.193 64.924 1.00 71.55 C
ATOM 7 C4' A B1119 -61.787 5.077 65.678 1.00 71.88 C
ATOM 8 O4' A B1119 -61.879 6.169 66.623 1.00 71.92 O
ATOM 9 C3' A B1119 -63.033 5.200 64.839 1.00 72.38 C
ATOM 10 O3' A B1119 -64.117 4.673 65.616 1.00 72.63 O
ATOM 11 C2' A B1119 -63.164 6.717 64.769 1.00 72.56 C
ATOM 12 O2' A B1119 -64.396 7.202 64.286 1.00 73.09 O
ATOM 13 C1' A B1119 -62.937 7.037 66.235 1.00 72.37 C
ATOM 14 N9 A B1119 -62.501 8.394 66.531 1.00 72.32 N
ATOM 15 C8 A B1119 -61.490 9.113 65.959 1.00 72.11 C
ATOM 16 N7 A B1119 -61.280 10.266 66.543 1.00 72.11 N
ATOM 17 C5 A B1119 -62.168 10.283 67.606 1.00 72.30 C
ATOM 18 C6 A B1119 -62.406 11.230 68.611 1.00 72.39 C
ATOM 19 N6 A B1119 -61.767 12.389 68.721 1.00 72.29 N
ATOM 20 N1 A B1119 -63.362 10.920 69.506 1.00 72.61 N
ATOM 21 C2 A B1119 -64.009 9.733 69.404 1.00 72.73 C
ATOM 22 N3 A B1119 -63.869 8.760 68.508 1.00 72.66 N
ATOM 23 C4 A B1119 -62.922 9.117 67.622 1.00 72.44 C
ATOM 24 P A B1120 -64.840 3.295 65.206 1.00 62.51 P
ATOM 25 OP1 A B1120 -64.032 2.693 64.109 1.00 62.28 O
ATOM 26 OP2 A B1120 -66.238 3.623 64.965 1.00 63.05 O
ATOM 27 O5' A B1120 -64.730 2.400 66.495 1.00 62.31 O
TER
Atoms:
C4: (-56.451,12.682,66.634)
N3: (-57.067,11.840,67.543)
OP1: (-53.426,7.937,60.850)
OP2: (-53.822,10.343,61.646)
C2: (-57.085,10.464,67.546)
C1': (-56.355,8.400,66.464)
C3': (-57.163,7.431,64.454)
O5': (-54.891,8.402,62.834)
O4': (-55.253,7.985,65.686)
C5': (-54.816,7.141,63.469)
P: (-53.679,8.900,61.958)
C4': (-55.705,7.062,64.672)
C2': (-57.627,7.773,65.860)
O2': (-57.933,6.588,66.578)
N1: (-56.393,9.901,66.490)
O4: (-56.535,13.899,66.791)
O2: (-57.659,9.775,68.389)
C6: (-55.749,10.698,65.550)
C5: (-55.752,12.035,65.574)
O3': (-57.904,6.383,63.849)
N3: (-57.067,11.840,67.543)
OP1: (-53.426,7.937,60.850)
OP2: (-53.822,10.343,61.646)
C2: (-57.085,10.464,67.546)
C1': (-56.355,8.400,66.464)
C3': (-57.163,7.431,64.454)
O5': (-54.891,8.402,62.834)
O4': (-55.253,7.985,65.686)
C5': (-54.816,7.141,63.469)
P: (-53.679,8.900,61.958)
C4': (-55.705,7.062,64.672)
C2': (-57.627,7.773,65.860)
O2': (-57.933,6.588,66.578)
N1: (-56.393,9.901,66.490)
O4: (-56.535,13.899,66.791)
O2: (-57.659,9.775,68.389)
C6: (-55.749,10.698,65.550)
C5: (-55.752,12.035,65.574)
O3': (-57.904,6.383,63.849)
OP1: (-59.493,5.629,62.096)
OP2: (-59.289,8.103,62.695)
C3': (-63.033,5.200,64.839)
C1': (-62.937,7.037,66.235)
C5': (-60.489,5.193,64.924)
O4': (-61.879,6.169,66.623)
C8: (-61.490,9.113,65.959)
O2': (-64.396,7.202,64.286)
C6: (-62.406,11.230,68.611)
C5: (-62.168,10.283,67.606)
C4: (-62.922,9.117,67.622)
P: (-59.300,6.681,63.125)
C4': (-61.787,5.077,65.678)
C2': (-63.164,6.717,64.769)
C2: (-64.009,9.733,69.404)
N1: (-63.362,10.920,69.506)
N3: (-63.869,8.760,68.508)
N6: (-61.767,12.389,68.721)
N7: (-61.280,10.266,66.543)
N9: (-62.501,8.394,66.531)
O5': (-60.339,6.471,64.309)
O3': (-64.117,4.673,65.616)
OP2: (-59.289,8.103,62.695)
C3': (-63.033,5.200,64.839)
C1': (-62.937,7.037,66.235)
C5': (-60.489,5.193,64.924)
O4': (-61.879,6.169,66.623)
C8: (-61.490,9.113,65.959)
O2': (-64.396,7.202,64.286)
C6: (-62.406,11.230,68.611)
C5: (-62.168,10.283,67.606)
C4: (-62.922,9.117,67.622)
P: (-59.300,6.681,63.125)
C4': (-61.787,5.077,65.678)
C2': (-63.164,6.717,64.769)
C2: (-64.009,9.733,69.404)
N1: (-63.362,10.920,69.506)
N3: (-63.869,8.760,68.508)
N6: (-61.767,12.389,68.721)
N7: (-61.280,10.266,66.543)
N9: (-62.501,8.394,66.531)
O5': (-60.339,6.471,64.309)
O3': (-64.117,4.673,65.616)
Image (generated by PyMOL):