Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.994 79.174 67.901 1.00 48.70 O
ATOM 2 P C A1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 3 OP1 C A1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 4 OP2 C A1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 5 O5' C A1234 4.424 80.653 65.955 1.00 47.39 O
ATOM 6 C5' C A1234 2.999 80.655 66.006 1.00 46.62 C
ATOM 7 C4' C A1234 2.462 82.031 65.717 1.00 48.81 C
ATOM 8 O4' C A1234 2.851 82.942 66.779 1.00 50.26 O
ATOM 9 C3' C A1234 2.987 82.719 64.470 1.00 49.01 C
ATOM 10 O3' C A1234 2.382 82.242 63.282 1.00 50.09 O
ATOM 11 C2' C A1234 2.625 84.167 64.756 1.00 49.97 C
ATOM 12 O2' C A1234 1.257 84.436 64.559 1.00 50.93 O
ATOM 13 C1' C A1234 2.939 84.260 66.252 1.00 50.67 C
ATOM 14 N1 C A1234 4.296 84.790 66.481 1.00 51.03 N
ATOM 15 C2 C A1234 4.491 86.175 66.408 1.00 52.29 C
ATOM 16 O2 C A1234 3.509 86.913 66.211 1.00 53.80 O
ATOM 17 N3 C A1234 5.737 86.675 66.558 1.00 52.23 N
ATOM 18 C4 C A1234 6.758 85.854 66.784 1.00 51.55 C
ATOM 19 N4 C A1234 7.967 86.391 66.915 1.00 53.96 N
ATOM 20 C5 C A1234 6.586 84.443 66.886 1.00 51.81 C
ATOM 21 C6 C A1234 5.351 83.959 66.734 1.00 50.54 C
ATOM 22 P U A1235 3.288 81.979 61.982 1.00 51.52 P
ATOM 23 OP1 U A1235 2.417 81.508 60.872 1.00 52.87 O
ATOM 24 OP2 U A1235 4.443 81.150 62.404 1.00 50.37 O
ATOM 25 O5' U A1235 3.813 83.428 61.588 1.00 52.66 O
TER
ATOM 1 O3' A B1239 8.025 97.907 66.020 1.00 90.21 O
ATOM 2 P C B1240 7.354 97.739 67.473 1.00 88.97 P
ATOM 3 OP1 C B1240 7.340 99.072 68.132 1.00 88.56 O
ATOM 4 OP2 C B1240 7.988 96.583 68.162 1.00 89.70 O
ATOM 5 O5' C B1240 5.844 97.349 67.160 1.00 86.37 O
ATOM 6 C5' C B1240 5.022 96.782 68.182 1.00 81.94 C
ATOM 7 C4' C B1240 3.655 96.461 67.641 1.00 78.13 C
ATOM 8 O4' C B1240 3.762 95.564 66.504 1.00 77.26 O
ATOM 9 C3' C B1240 2.800 95.699 68.628 1.00 76.42 C
ATOM 10 O3' C B1240 2.196 96.576 69.559 1.00 74.85 O
ATOM 11 C2' C B1240 1.808 94.987 67.724 1.00 75.97 C
ATOM 12 O2' C B1240 0.768 95.835 67.278 1.00 75.99 O
ATOM 13 C1' C B1240 2.711 94.607 66.547 1.00 75.25 C
ATOM 14 N1 C B1240 3.309 93.260 66.673 1.00 72.51 N
ATOM 15 C2 C B1240 2.470 92.131 66.627 1.00 71.54 C
ATOM 16 O2 C B1240 1.242 92.291 66.493 1.00 72.10 O
ATOM 17 N3 C B1240 3.019 90.897 66.730 1.00 69.84 N
ATOM 18 C4 C B1240 4.340 90.764 66.879 1.00 68.26 C
ATOM 19 N4 C B1240 4.839 89.533 66.980 1.00 66.75 N
ATOM 20 C5 C B1240 5.210 91.890 66.933 1.00 69.00 C
ATOM 21 C6 C B1240 4.659 93.105 66.828 1.00 70.24 C
ATOM 22 P U B1241 2.220 96.204 71.115 1.00 72.87 P
ATOM 23 OP1 U B1241 1.328 97.170 71.798 1.00 73.79 O
ATOM 24 OP2 U B1241 3.636 96.075 71.544 1.00 71.02 O
ATOM 25 O5' U B1241 1.523 94.775 71.163 1.00 72.24 O
TER
ATOM 2 P C A1234 5.235 79.337 66.324 1.00 50.09 P
ATOM 3 OP1 C A1234 4.559 78.182 65.663 1.00 52.05 O
ATOM 4 OP2 C A1234 6.677 79.575 66.082 1.00 50.21 O
ATOM 5 O5' C A1234 4.424 80.653 65.955 1.00 47.39 O
ATOM 6 C5' C A1234 2.999 80.655 66.006 1.00 46.62 C
ATOM 7 C4' C A1234 2.462 82.031 65.717 1.00 48.81 C
ATOM 8 O4' C A1234 2.851 82.942 66.779 1.00 50.26 O
ATOM 9 C3' C A1234 2.987 82.719 64.470 1.00 49.01 C
ATOM 10 O3' C A1234 2.382 82.242 63.282 1.00 50.09 O
ATOM 11 C2' C A1234 2.625 84.167 64.756 1.00 49.97 C
ATOM 12 O2' C A1234 1.257 84.436 64.559 1.00 50.93 O
ATOM 13 C1' C A1234 2.939 84.260 66.252 1.00 50.67 C
ATOM 14 N1 C A1234 4.296 84.790 66.481 1.00 51.03 N
ATOM 15 C2 C A1234 4.491 86.175 66.408 1.00 52.29 C
ATOM 16 O2 C A1234 3.509 86.913 66.211 1.00 53.80 O
ATOM 17 N3 C A1234 5.737 86.675 66.558 1.00 52.23 N
ATOM 18 C4 C A1234 6.758 85.854 66.784 1.00 51.55 C
ATOM 19 N4 C A1234 7.967 86.391 66.915 1.00 53.96 N
ATOM 20 C5 C A1234 6.586 84.443 66.886 1.00 51.81 C
ATOM 21 C6 C A1234 5.351 83.959 66.734 1.00 50.54 C
ATOM 22 P U A1235 3.288 81.979 61.982 1.00 51.52 P
ATOM 23 OP1 U A1235 2.417 81.508 60.872 1.00 52.87 O
ATOM 24 OP2 U A1235 4.443 81.150 62.404 1.00 50.37 O
ATOM 25 O5' U A1235 3.813 83.428 61.588 1.00 52.66 O
TER
ATOM 1 O3' A B1239 8.025 97.907 66.020 1.00 90.21 O
ATOM 2 P C B1240 7.354 97.739 67.473 1.00 88.97 P
ATOM 3 OP1 C B1240 7.340 99.072 68.132 1.00 88.56 O
ATOM 4 OP2 C B1240 7.988 96.583 68.162 1.00 89.70 O
ATOM 5 O5' C B1240 5.844 97.349 67.160 1.00 86.37 O
ATOM 6 C5' C B1240 5.022 96.782 68.182 1.00 81.94 C
ATOM 7 C4' C B1240 3.655 96.461 67.641 1.00 78.13 C
ATOM 8 O4' C B1240 3.762 95.564 66.504 1.00 77.26 O
ATOM 9 C3' C B1240 2.800 95.699 68.628 1.00 76.42 C
ATOM 10 O3' C B1240 2.196 96.576 69.559 1.00 74.85 O
ATOM 11 C2' C B1240 1.808 94.987 67.724 1.00 75.97 C
ATOM 12 O2' C B1240 0.768 95.835 67.278 1.00 75.99 O
ATOM 13 C1' C B1240 2.711 94.607 66.547 1.00 75.25 C
ATOM 14 N1 C B1240 3.309 93.260 66.673 1.00 72.51 N
ATOM 15 C2 C B1240 2.470 92.131 66.627 1.00 71.54 C
ATOM 16 O2 C B1240 1.242 92.291 66.493 1.00 72.10 O
ATOM 17 N3 C B1240 3.019 90.897 66.730 1.00 69.84 N
ATOM 18 C4 C B1240 4.340 90.764 66.879 1.00 68.26 C
ATOM 19 N4 C B1240 4.839 89.533 66.980 1.00 66.75 N
ATOM 20 C5 C B1240 5.210 91.890 66.933 1.00 69.00 C
ATOM 21 C6 C B1240 4.659 93.105 66.828 1.00 70.24 C
ATOM 22 P U B1241 2.220 96.204 71.115 1.00 72.87 P
ATOM 23 OP1 U B1241 1.328 97.170 71.798 1.00 73.79 O
ATOM 24 OP2 U B1241 3.636 96.075 71.544 1.00 71.02 O
ATOM 25 O5' U B1241 1.523 94.775 71.163 1.00 72.24 O
TER
Atoms:
C2: (4.491,86.175,66.408)
OP1: (4.559,78.182,65.663)
OP2: (6.677,79.575,66.082)
C4: (6.758,85.854,66.784)
O5': (4.424,80.653,65.955)
C3': (2.987,82.719,64.470)
C1': (2.939,84.260,66.252)
O4': (2.851,82.942,66.779)
C5': (2.999,80.655,66.006)
P: (5.235,79.337,66.324)
O2: (3.509,86.913,66.211)
C4': (2.462,82.031,65.717)
C2': (2.625,84.167,64.756)
O2': (1.257,84.436,64.559)
N1: (4.296,84.790,66.481)
N3: (5.737,86.675,66.558)
N4: (7.967,86.391,66.915)
C6: (5.351,83.959,66.734)
C5: (6.586,84.443,66.886)
O3': (2.382,82.242,63.282)
OP1: (4.559,78.182,65.663)
OP2: (6.677,79.575,66.082)
C4: (6.758,85.854,66.784)
O5': (4.424,80.653,65.955)
C3': (2.987,82.719,64.470)
C1': (2.939,84.260,66.252)
O4': (2.851,82.942,66.779)
C5': (2.999,80.655,66.006)
P: (5.235,79.337,66.324)
O2: (3.509,86.913,66.211)
C4': (2.462,82.031,65.717)
C2': (2.625,84.167,64.756)
O2': (1.257,84.436,64.559)
N1: (4.296,84.790,66.481)
N3: (5.737,86.675,66.558)
N4: (7.967,86.391,66.915)
C6: (5.351,83.959,66.734)
C5: (6.586,84.443,66.886)
O3': (2.382,82.242,63.282)
C2: (2.470,92.131,66.627)
OP1: (7.340,99.072,68.132)
OP2: (7.988,96.583,68.162)
C4: (4.340,90.764,66.879)
O5': (5.844,97.349,67.160)
C3': (2.800,95.699,68.628)
C1': (2.711,94.607,66.547)
O4': (3.762,95.564,66.504)
C5': (5.022,96.782,68.182)
P: (7.354,97.739,67.473)
O2: (1.242,92.291,66.493)
C4': (3.655,96.461,67.641)
C2': (1.808,94.987,67.724)
O2': (0.768,95.835,67.278)
N1: (3.309,93.260,66.673)
N3: (3.019,90.897,66.730)
N4: (4.839,89.533,66.980)
C6: (4.659,93.105,66.828)
C5: (5.210,91.890,66.933)
O3': (2.196,96.576,69.559)
OP1: (7.340,99.072,68.132)
OP2: (7.988,96.583,68.162)
C4: (4.340,90.764,66.879)
O5': (5.844,97.349,67.160)
C3': (2.800,95.699,68.628)
C1': (2.711,94.607,66.547)
O4': (3.762,95.564,66.504)
C5': (5.022,96.782,68.182)
P: (7.354,97.739,67.473)
O2: (1.242,92.291,66.493)
C4': (3.655,96.461,67.641)
C2': (1.808,94.987,67.724)
O2': (0.768,95.835,67.278)
N1: (3.309,93.260,66.673)
N3: (3.019,90.897,66.730)
N4: (4.839,89.533,66.980)
C6: (4.659,93.105,66.828)
C5: (5.210,91.890,66.933)
O3': (2.196,96.576,69.559)
Image (generated by PyMOL):