Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01814:01816
Extra
PDB:
ATOM 1 O3' G A1813 122.851 123.987 56.130 1.00 50.95 O
ATOM 2 P C A1814 121.839 123.770 54.909 1.00 53.31 P
ATOM 3 OP1 C A1814 121.125 122.478 55.129 1.00 52.78 O
ATOM 4 OP2 C A1814 122.573 123.998 53.639 1.00 53.12 O
ATOM 5 O5' C A1814 120.793 124.954 55.092 1.00 51.05 O
ATOM 6 C5' C A1814 119.497 124.854 54.504 1.00 50.58 C
ATOM 7 C4' C A1814 118.852 126.208 54.395 1.00 48.79 C
ATOM 8 O4' C A1814 118.423 126.662 55.703 1.00 46.95 O
ATOM 9 C3' C A1814 119.706 127.317 53.803 1.00 47.58 C
ATOM 10 O3' C A1814 119.008 127.930 52.736 1.00 47.92 O
ATOM 11 C2' C A1814 119.903 128.277 54.973 1.00 46.65 C
ATOM 12 O2' C A1814 119.932 129.615 54.543 1.00 47.89 O
ATOM 13 C1' C A1814 118.646 128.044 55.805 1.00 46.19 C
ATOM 14 N1 C A1814 118.828 128.376 57.233 1.00 45.75 N
ATOM 15 C2 C A1814 118.001 129.357 57.830 1.00 45.35 C
ATOM 16 O2 C A1814 117.114 129.904 57.153 1.00 44.54 O
ATOM 17 N3 C A1814 118.199 129.680 59.131 1.00 44.66 N
ATOM 18 C4 C A1814 119.165 129.073 59.830 1.00 46.58 C
ATOM 19 N4 C A1814 119.346 129.437 61.096 1.00 46.44 N
ATOM 20 C5 C A1814 119.997 128.065 59.259 1.00 46.63 C
ATOM 21 C6 C A1814 119.794 127.749 57.972 1.00 46.62 C
ATOM 22 P A A1815 119.428 127.582 51.225 1.00 48.94 P
ATOM 23 OP1 A A1815 120.744 126.908 51.236 1.00 46.43 O
ATOM 24 OP2 A A1815 119.248 128.825 50.436 1.00 49.05 O
ATOM 25 O5' A A1815 118.362 126.492 50.757 1.00 51.67 O
TER
ATOM 1 O3' A B1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 2 P A B1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 3 OP1 A B1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 4 OP2 A B1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 5 O5' A B1816 115.365 123.869 54.401 1.00 52.73 O
ATOM 6 C5' A B1816 116.082 122.642 54.631 1.00 47.72 C
ATOM 7 C4' A B1816 116.553 122.564 56.066 1.00 44.47 C
ATOM 8 O4' A B1816 117.210 123.808 56.420 1.00 44.67 O
ATOM 9 C3' A B1816 115.482 122.436 57.127 1.00 45.33 C
ATOM 10 O3' A B1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 11 C2' A B1816 116.211 122.925 58.374 1.00 45.18 C
ATOM 12 O2' A B1816 117.110 121.977 58.912 1.00 44.97 O
ATOM 13 C1' A B1816 117.030 124.076 57.802 1.00 44.39 C
ATOM 14 N9 A B1816 116.379 125.379 57.945 1.00 45.19 N
ATOM 15 C8 A B1816 115.823 126.157 56.958 1.00 46.37 C
ATOM 16 N7 A B1816 115.311 127.282 57.396 1.00 46.82 N
ATOM 17 C5 A B1816 115.541 127.244 58.764 1.00 45.73 C
ATOM 18 C6 A B1816 115.224 128.141 59.803 1.00 47.05 C
ATOM 19 N6 A B1816 114.598 129.308 59.611 1.00 47.10 N
ATOM 20 N1 A B1816 115.579 127.795 61.063 1.00 47.60 N
ATOM 21 C2 A B1816 116.218 126.630 61.250 1.00 47.05 C
ATOM 22 N3 A B1816 116.575 125.708 60.354 1.00 46.12 N
ATOM 23 C4 A B1816 116.200 126.078 59.117 1.00 45.33 C
ATOM 24 P A B1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 25 OP1 A B1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 26 OP2 A B1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 27 O5' A B1817 113.442 121.163 59.227 1.00 41.06 O
TER
ATOM 2 P C A1814 121.839 123.770 54.909 1.00 53.31 P
ATOM 3 OP1 C A1814 121.125 122.478 55.129 1.00 52.78 O
ATOM 4 OP2 C A1814 122.573 123.998 53.639 1.00 53.12 O
ATOM 5 O5' C A1814 120.793 124.954 55.092 1.00 51.05 O
ATOM 6 C5' C A1814 119.497 124.854 54.504 1.00 50.58 C
ATOM 7 C4' C A1814 118.852 126.208 54.395 1.00 48.79 C
ATOM 8 O4' C A1814 118.423 126.662 55.703 1.00 46.95 O
ATOM 9 C3' C A1814 119.706 127.317 53.803 1.00 47.58 C
ATOM 10 O3' C A1814 119.008 127.930 52.736 1.00 47.92 O
ATOM 11 C2' C A1814 119.903 128.277 54.973 1.00 46.65 C
ATOM 12 O2' C A1814 119.932 129.615 54.543 1.00 47.89 O
ATOM 13 C1' C A1814 118.646 128.044 55.805 1.00 46.19 C
ATOM 14 N1 C A1814 118.828 128.376 57.233 1.00 45.75 N
ATOM 15 C2 C A1814 118.001 129.357 57.830 1.00 45.35 C
ATOM 16 O2 C A1814 117.114 129.904 57.153 1.00 44.54 O
ATOM 17 N3 C A1814 118.199 129.680 59.131 1.00 44.66 N
ATOM 18 C4 C A1814 119.165 129.073 59.830 1.00 46.58 C
ATOM 19 N4 C A1814 119.346 129.437 61.096 1.00 46.44 N
ATOM 20 C5 C A1814 119.997 128.065 59.259 1.00 46.63 C
ATOM 21 C6 C A1814 119.794 127.749 57.972 1.00 46.62 C
ATOM 22 P A A1815 119.428 127.582 51.225 1.00 48.94 P
ATOM 23 OP1 A A1815 120.744 126.908 51.236 1.00 46.43 O
ATOM 24 OP2 A A1815 119.248 128.825 50.436 1.00 49.05 O
ATOM 25 O5' A A1815 118.362 126.492 50.757 1.00 51.67 O
TER
ATOM 1 O3' A B1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 2 P A B1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 3 OP1 A B1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 4 OP2 A B1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 5 O5' A B1816 115.365 123.869 54.401 1.00 52.73 O
ATOM 6 C5' A B1816 116.082 122.642 54.631 1.00 47.72 C
ATOM 7 C4' A B1816 116.553 122.564 56.066 1.00 44.47 C
ATOM 8 O4' A B1816 117.210 123.808 56.420 1.00 44.67 O
ATOM 9 C3' A B1816 115.482 122.436 57.127 1.00 45.33 C
ATOM 10 O3' A B1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 11 C2' A B1816 116.211 122.925 58.374 1.00 45.18 C
ATOM 12 O2' A B1816 117.110 121.977 58.912 1.00 44.97 O
ATOM 13 C1' A B1816 117.030 124.076 57.802 1.00 44.39 C
ATOM 14 N9 A B1816 116.379 125.379 57.945 1.00 45.19 N
ATOM 15 C8 A B1816 115.823 126.157 56.958 1.00 46.37 C
ATOM 16 N7 A B1816 115.311 127.282 57.396 1.00 46.82 N
ATOM 17 C5 A B1816 115.541 127.244 58.764 1.00 45.73 C
ATOM 18 C6 A B1816 115.224 128.141 59.803 1.00 47.05 C
ATOM 19 N6 A B1816 114.598 129.308 59.611 1.00 47.10 N
ATOM 20 N1 A B1816 115.579 127.795 61.063 1.00 47.60 N
ATOM 21 C2 A B1816 116.218 126.630 61.250 1.00 47.05 C
ATOM 22 N3 A B1816 116.575 125.708 60.354 1.00 46.12 N
ATOM 23 C4 A B1816 116.200 126.078 59.117 1.00 45.33 C
ATOM 24 P A B1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 25 OP1 A B1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 26 OP2 A B1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 27 O5' A B1817 113.442 121.163 59.227 1.00 41.06 O
TER
Atoms:
C2: (118.001,129.357,57.830)
OP1: (121.125,122.478,55.129)
OP2: (122.573,123.998,53.639)
C4: (119.165,129.073,59.830)
O5': (120.793,124.954,55.092)
C3': (119.706,127.317,53.803)
C1': (118.646,128.044,55.805)
O4': (118.423,126.662,55.703)
C5': (119.497,124.854,54.504)
P: (121.839,123.770,54.909)
O2: (117.114,129.904,57.153)
C4': (118.852,126.208,54.395)
C2': (119.903,128.277,54.973)
O2': (119.932,129.615,54.543)
N1: (118.828,128.376,57.233)
N3: (118.199,129.680,59.131)
N4: (119.346,129.437,61.096)
C6: (119.794,127.749,57.972)
C5: (119.997,128.065,59.259)
O3': (119.008,127.930,52.736)
OP1: (121.125,122.478,55.129)
OP2: (122.573,123.998,53.639)
C4: (119.165,129.073,59.830)
O5': (120.793,124.954,55.092)
C3': (119.706,127.317,53.803)
C1': (118.646,128.044,55.805)
O4': (118.423,126.662,55.703)
C5': (119.497,124.854,54.504)
P: (121.839,123.770,54.909)
O2: (117.114,129.904,57.153)
C4': (118.852,126.208,54.395)
C2': (119.903,128.277,54.973)
O2': (119.932,129.615,54.543)
N1: (118.828,128.376,57.233)
N3: (118.199,129.680,59.131)
N4: (119.346,129.437,61.096)
C6: (119.794,127.749,57.972)
C5: (119.997,128.065,59.259)
O3': (119.008,127.930,52.736)
OP1: (113.329,123.008,53.238)
OP2: (114.014,125.476,53.037)
C3': (115.482,122.436,57.127)
C1': (117.030,124.076,57.802)
C5': (116.082,122.642,54.631)
O4': (117.210,123.808,56.420)
C8: (115.823,126.157,56.958)
O2': (117.110,121.977,58.912)
C6: (115.224,128.141,59.803)
C5: (115.541,127.244,58.764)
C4: (116.200,126.078,59.117)
P: (114.394,124.041,53.146)
C4': (116.553,122.564,56.066)
C2': (116.211,122.925,58.374)
C2: (116.218,126.630,61.250)
N1: (115.579,127.795,61.063)
N3: (116.575,125.708,60.354)
N6: (114.598,129.308,59.611)
N7: (115.311,127.282,57.396)
N9: (116.379,125.379,57.945)
O5': (115.365,123.869,54.401)
O3': (115.030,121.094,57.253)
OP2: (114.014,125.476,53.037)
C3': (115.482,122.436,57.127)
C1': (117.030,124.076,57.802)
C5': (116.082,122.642,54.631)
O4': (117.210,123.808,56.420)
C8: (115.823,126.157,56.958)
O2': (117.110,121.977,58.912)
C6: (115.224,128.141,59.803)
C5: (115.541,127.244,58.764)
C4: (116.200,126.078,59.117)
P: (114.394,124.041,53.146)
C4': (116.553,122.564,56.066)
C2': (116.211,122.925,58.374)
C2: (116.218,126.630,61.250)
N1: (115.579,127.795,61.063)
N3: (116.575,125.708,60.354)
N6: (114.598,129.308,59.611)
N7: (115.311,127.282,57.396)
N9: (116.379,125.379,57.945)
O5': (115.365,123.869,54.401)
O3': (115.030,121.094,57.253)
Image (generated by PyMOL):