Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2078:A2107
Extra
PDB:
ATOM 1 O3' G A2077 107.044 105.448 33.817 1.00 64.43 O
ATOM 2 P C A2078 108.439 105.877 33.152 1.00 66.62 P
ATOM 3 OP1 C A2078 108.296 105.744 31.678 1.00 67.85 O
ATOM 4 OP2 C A2078 109.475 105.063 33.875 1.00 65.54 O
ATOM 5 O5' C A2078 108.587 107.432 33.517 1.00 66.01 O
ATOM 6 C5' C A2078 107.660 108.406 32.977 1.00 66.55 C
ATOM 7 C4' C A2078 107.814 109.755 33.655 1.00 66.69 C
ATOM 8 O4' C A2078 107.483 109.690 35.069 1.00 67.01 O
ATOM 9 C3' C A2078 109.198 110.360 33.591 1.00 66.77 C
ATOM 10 O3' C A2078 109.355 110.998 32.338 1.00 66.78 O
ATOM 11 C2' C A2078 109.206 111.322 34.778 1.00 66.81 C
ATOM 12 O2' C A2078 108.712 112.620 34.485 1.00 66.68 O
ATOM 13 C1' C A2078 108.303 110.595 35.790 1.00 66.80 C
ATOM 14 N1 C A2078 109.043 109.824 36.818 1.00 66.90 N
ATOM 15 C2 C A2078 109.574 110.498 37.958 1.00 68.09 C
ATOM 16 O2 C A2078 109.356 111.715 38.106 1.00 69.80 O
ATOM 17 N3 C A2078 110.299 109.785 38.866 1.00 66.81 N
ATOM 18 C4 C A2078 110.499 108.479 38.675 1.00 66.07 C
ATOM 19 N4 C A2078 111.260 107.832 39.553 1.00 66.42 N
ATOM 20 C5 C A2078 109.940 107.778 37.561 1.00 65.01 C
ATOM 21 C6 C A2078 109.229 108.478 36.673 1.00 65.41 C
ATOM 22 P U A2079 110.792 111.023 31.630 1.00 68.37 P
ATOM 23 OP1 U A2079 111.537 112.132 32.253 1.00 68.26 O
ATOM 24 OP2 U A2079 110.600 111.003 30.149 1.00 68.55 O
ATOM 25 O5' U A2079 111.498 109.656 32.052 1.00 67.19 O
TER
ATOM 1 O3' A B2106 112.887 113.934 47.994 1.00 61.35 O
ATOM 2 P C B2107 111.326 113.586 48.073 1.00 61.72 P
ATOM 3 OP1 C B2107 110.905 113.805 49.477 1.00 61.10 O
ATOM 4 OP2 C B2107 111.085 112.270 47.425 1.00 61.28 O
ATOM 5 O5' C B2107 110.651 114.687 47.148 1.00 59.69 O
ATOM 6 C5' C B2107 110.726 116.083 47.483 1.00 58.63 C
ATOM 7 C4' C B2107 110.124 116.906 46.373 1.00 57.01 C
ATOM 8 O4' C B2107 110.872 116.666 45.157 1.00 56.88 O
ATOM 9 C3' C B2107 108.701 116.530 45.992 1.00 56.18 C
ATOM 10 O3' C B2107 107.721 117.112 46.840 1.00 54.97 O
ATOM 11 C2' C B2107 108.595 117.019 44.559 1.00 55.59 C
ATOM 12 O2' C B2107 108.364 118.401 44.456 1.00 57.50 O
ATOM 13 C1' C B2107 109.996 116.723 44.043 1.00 54.89 C
ATOM 14 N1 C B2107 110.048 115.450 43.333 1.00 52.59 N
ATOM 15 C2 C B2107 109.565 115.399 42.027 1.00 51.70 C
ATOM 16 O2 C B2107 109.063 116.421 41.533 1.00 50.14 O
ATOM 17 N3 C B2107 109.651 114.245 41.337 1.00 51.96 N
ATOM 18 C4 C B2107 110.186 113.165 41.917 1.00 52.88 C
ATOM 19 N4 C B2107 110.293 112.035 41.201 1.00 53.80 N
ATOM 20 C5 C B2107 110.650 113.186 43.261 1.00 52.53 C
ATOM 21 C6 C B2107 110.565 114.337 43.925 1.00 52.05 C
ATOM 22 P C B2108 106.534 116.196 47.399 1.00 53.47 P
ATOM 23 OP1 C B2108 105.642 117.028 48.239 1.00 53.52 O
ATOM 24 OP2 C B2108 107.157 114.978 47.970 1.00 53.21 O
ATOM 25 O5' C B2108 105.701 115.855 46.090 1.00 53.45 O
TER
ATOM 2 P C A2078 108.439 105.877 33.152 1.00 66.62 P
ATOM 3 OP1 C A2078 108.296 105.744 31.678 1.00 67.85 O
ATOM 4 OP2 C A2078 109.475 105.063 33.875 1.00 65.54 O
ATOM 5 O5' C A2078 108.587 107.432 33.517 1.00 66.01 O
ATOM 6 C5' C A2078 107.660 108.406 32.977 1.00 66.55 C
ATOM 7 C4' C A2078 107.814 109.755 33.655 1.00 66.69 C
ATOM 8 O4' C A2078 107.483 109.690 35.069 1.00 67.01 O
ATOM 9 C3' C A2078 109.198 110.360 33.591 1.00 66.77 C
ATOM 10 O3' C A2078 109.355 110.998 32.338 1.00 66.78 O
ATOM 11 C2' C A2078 109.206 111.322 34.778 1.00 66.81 C
ATOM 12 O2' C A2078 108.712 112.620 34.485 1.00 66.68 O
ATOM 13 C1' C A2078 108.303 110.595 35.790 1.00 66.80 C
ATOM 14 N1 C A2078 109.043 109.824 36.818 1.00 66.90 N
ATOM 15 C2 C A2078 109.574 110.498 37.958 1.00 68.09 C
ATOM 16 O2 C A2078 109.356 111.715 38.106 1.00 69.80 O
ATOM 17 N3 C A2078 110.299 109.785 38.866 1.00 66.81 N
ATOM 18 C4 C A2078 110.499 108.479 38.675 1.00 66.07 C
ATOM 19 N4 C A2078 111.260 107.832 39.553 1.00 66.42 N
ATOM 20 C5 C A2078 109.940 107.778 37.561 1.00 65.01 C
ATOM 21 C6 C A2078 109.229 108.478 36.673 1.00 65.41 C
ATOM 22 P U A2079 110.792 111.023 31.630 1.00 68.37 P
ATOM 23 OP1 U A2079 111.537 112.132 32.253 1.00 68.26 O
ATOM 24 OP2 U A2079 110.600 111.003 30.149 1.00 68.55 O
ATOM 25 O5' U A2079 111.498 109.656 32.052 1.00 67.19 O
TER
ATOM 1 O3' A B2106 112.887 113.934 47.994 1.00 61.35 O
ATOM 2 P C B2107 111.326 113.586 48.073 1.00 61.72 P
ATOM 3 OP1 C B2107 110.905 113.805 49.477 1.00 61.10 O
ATOM 4 OP2 C B2107 111.085 112.270 47.425 1.00 61.28 O
ATOM 5 O5' C B2107 110.651 114.687 47.148 1.00 59.69 O
ATOM 6 C5' C B2107 110.726 116.083 47.483 1.00 58.63 C
ATOM 7 C4' C B2107 110.124 116.906 46.373 1.00 57.01 C
ATOM 8 O4' C B2107 110.872 116.666 45.157 1.00 56.88 O
ATOM 9 C3' C B2107 108.701 116.530 45.992 1.00 56.18 C
ATOM 10 O3' C B2107 107.721 117.112 46.840 1.00 54.97 O
ATOM 11 C2' C B2107 108.595 117.019 44.559 1.00 55.59 C
ATOM 12 O2' C B2107 108.364 118.401 44.456 1.00 57.50 O
ATOM 13 C1' C B2107 109.996 116.723 44.043 1.00 54.89 C
ATOM 14 N1 C B2107 110.048 115.450 43.333 1.00 52.59 N
ATOM 15 C2 C B2107 109.565 115.399 42.027 1.00 51.70 C
ATOM 16 O2 C B2107 109.063 116.421 41.533 1.00 50.14 O
ATOM 17 N3 C B2107 109.651 114.245 41.337 1.00 51.96 N
ATOM 18 C4 C B2107 110.186 113.165 41.917 1.00 52.88 C
ATOM 19 N4 C B2107 110.293 112.035 41.201 1.00 53.80 N
ATOM 20 C5 C B2107 110.650 113.186 43.261 1.00 52.53 C
ATOM 21 C6 C B2107 110.565 114.337 43.925 1.00 52.05 C
ATOM 22 P C B2108 106.534 116.196 47.399 1.00 53.47 P
ATOM 23 OP1 C B2108 105.642 117.028 48.239 1.00 53.52 O
ATOM 24 OP2 C B2108 107.157 114.978 47.970 1.00 53.21 O
ATOM 25 O5' C B2108 105.701 115.855 46.090 1.00 53.45 O
TER
Atoms:
C2: (109.574,110.498,37.958)
OP1: (108.296,105.744,31.678)
OP2: (109.475,105.063,33.875)
C4: (110.499,108.479,38.675)
O5': (108.587,107.432,33.517)
C3': (109.198,110.360,33.591)
C1': (108.303,110.595,35.790)
O4': (107.483,109.690,35.069)
C5': (107.660,108.406,32.977)
P: (108.439,105.877,33.152)
O2: (109.356,111.715,38.106)
C4': (107.814,109.755,33.655)
C2': (109.206,111.322,34.778)
O2': (108.712,112.620,34.485)
N1: (109.043,109.824,36.818)
N3: (110.299,109.785,38.866)
N4: (111.260,107.832,39.553)
C6: (109.229,108.478,36.673)
C5: (109.940,107.778,37.561)
O3': (109.355,110.998,32.338)
OP1: (108.296,105.744,31.678)
OP2: (109.475,105.063,33.875)
C4: (110.499,108.479,38.675)
O5': (108.587,107.432,33.517)
C3': (109.198,110.360,33.591)
C1': (108.303,110.595,35.790)
O4': (107.483,109.690,35.069)
C5': (107.660,108.406,32.977)
P: (108.439,105.877,33.152)
O2: (109.356,111.715,38.106)
C4': (107.814,109.755,33.655)
C2': (109.206,111.322,34.778)
O2': (108.712,112.620,34.485)
N1: (109.043,109.824,36.818)
N3: (110.299,109.785,38.866)
N4: (111.260,107.832,39.553)
C6: (109.229,108.478,36.673)
C5: (109.940,107.778,37.561)
O3': (109.355,110.998,32.338)
C2: (109.565,115.399,42.027)
OP1: (110.905,113.805,49.477)
OP2: (111.085,112.270,47.425)
C4: (110.186,113.165,41.917)
O5': (110.651,114.687,47.148)
C3': (108.701,116.530,45.992)
C1': (109.996,116.723,44.043)
O4': (110.872,116.666,45.157)
C5': (110.726,116.083,47.483)
P: (111.326,113.586,48.073)
O2: (109.063,116.421,41.533)
C4': (110.124,116.906,46.373)
C2': (108.595,117.019,44.559)
O2': (108.364,118.401,44.456)
N1: (110.048,115.450,43.333)
N3: (109.651,114.245,41.337)
N4: (110.293,112.035,41.201)
C6: (110.565,114.337,43.925)
C5: (110.650,113.186,43.261)
O3': (107.721,117.112,46.840)
OP1: (110.905,113.805,49.477)
OP2: (111.085,112.270,47.425)
C4: (110.186,113.165,41.917)
O5': (110.651,114.687,47.148)
C3': (108.701,116.530,45.992)
C1': (109.996,116.723,44.043)
O4': (110.872,116.666,45.157)
C5': (110.726,116.083,47.483)
P: (111.326,113.586,48.073)
O2: (109.063,116.421,41.533)
C4': (110.124,116.906,46.373)
C2': (108.595,117.019,44.559)
O2': (108.364,118.401,44.456)
N1: (110.048,115.450,43.333)
N3: (109.651,114.245,41.337)
N4: (110.293,112.035,41.201)
C6: (110.565,114.337,43.925)
C5: (110.650,113.186,43.261)
O3': (107.721,117.112,46.840)
Image (generated by PyMOL):