Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21172:21176
Extra
PDB:
ATOM 1 O3' A A1171 -61.873 -37.472 56.082 1.00 75.49 O
ATOM 2 P C A1172 -60.552 -36.993 56.858 1.00 74.93 P
ATOM 3 OP1 C A1172 -60.957 -35.907 57.784 1.00 74.86 O
ATOM 4 OP2 C A1172 -59.525 -36.711 55.829 1.00 74.65 O
ATOM 5 O5' C A1172 -60.138 -38.281 57.678 1.00 75.07 O
ATOM 6 C5' C A1172 -60.891 -38.691 58.796 1.00 75.34 C
ATOM 7 C4' C A1172 -60.023 -39.314 59.852 1.00 75.30 C
ATOM 8 O4' C A1172 -59.405 -40.503 59.317 1.00 75.38 O
ATOM 9 C3' C A1172 -58.887 -38.439 60.375 1.00 74.92 C
ATOM 10 O3' C A1172 -58.689 -38.713 61.748 1.00 75.01 O
ATOM 11 C2' C A1172 -57.682 -38.936 59.593 1.00 74.74 C
ATOM 12 O2' C A1172 -56.439 -38.740 60.236 1.00 74.50 O
ATOM 13 C1' C A1172 -58.000 -40.410 59.439 1.00 75.09 C
ATOM 14 N1 C A1172 -57.417 -41.007 58.245 1.00 75.04 N
ATOM 15 C2 C A1172 -56.404 -41.950 58.408 1.00 75.06 C
ATOM 16 O2 C A1172 -56.011 -42.238 59.565 1.00 75.11 O
ATOM 17 N3 C A1172 -55.899 -42.500 57.277 1.00 75.05 N
ATOM 18 C4 C A1172 -56.365 -42.140 56.065 1.00 75.02 C
ATOM 19 N4 C A1172 -55.830 -42.716 54.972 1.00 75.02 N
ATOM 20 C5 C A1172 -57.398 -41.172 55.910 1.00 75.01 C
ATOM 21 C6 C A1172 -57.893 -40.630 57.021 1.00 75.02 C
ATOM 22 P U A1173 -59.201 -37.672 62.851 1.00 85.23 P
ATOM 23 OP1 U A1173 -60.119 -36.700 62.163 1.00 85.20 O
ATOM 24 OP2 U A1173 -57.983 -37.151 63.548 1.00 84.93 O
ATOM 25 O5' U A1173 -60.033 -38.601 63.828 1.00 85.67 O
TER
ATOM 1 O3' A B1175 -67.381 -40.055 61.319 1.00 83.21 O
ATOM 2 P A B1176 -66.790 -40.768 60.012 1.00 87.29 P
ATOM 3 OP1 A B1176 -65.733 -39.878 59.461 1.00 86.80 O
ATOM 4 OP2 A B1176 -67.938 -41.110 59.158 1.00 87.64 O
ATOM 5 O5' A B1176 -66.144 -42.120 60.593 1.00 87.41 O
ATOM 6 C5' A B1176 -64.730 -42.317 60.672 1.00 87.08 C
ATOM 7 C4' A B1176 -64.092 -42.484 59.310 1.00 86.87 C
ATOM 8 O4' A B1176 -62.836 -41.754 59.277 1.00 86.41 O
ATOM 9 C3' A B1176 -63.696 -43.901 58.907 1.00 87.04 C
ATOM 10 O3' A B1176 -64.794 -44.676 58.409 1.00 87.45 O
ATOM 11 C2' A B1176 -62.601 -43.629 57.876 1.00 86.67 C
ATOM 12 O2' A B1176 -63.159 -43.134 56.670 1.00 86.65 O
ATOM 13 C1' A B1176 -61.862 -42.485 58.552 1.00 86.29 C
ATOM 14 N9 A B1176 -60.837 -42.989 59.502 1.00 86.21 N
ATOM 15 C8 A B1176 -60.816 -42.878 60.880 1.00 86.27 C
ATOM 16 N7 A B1176 -59.800 -43.470 61.471 1.00 86.23 N
ATOM 17 C5 A B1176 -59.102 -44.017 60.403 1.00 86.14 C
ATOM 18 C6 A B1176 -57.933 -44.783 60.361 1.00 86.09 C
ATOM 19 N6 A B1176 -57.277 -45.099 61.467 1.00 86.13 N
ATOM 20 N1 A B1176 -57.455 -45.193 59.169 1.00 86.01 N
ATOM 21 C2 A B1176 -58.157 -44.840 58.087 1.00 86.00 C
ATOM 22 N3 A B1176 -59.285 -44.132 57.989 1.00 86.06 N
ATOM 23 C4 A B1176 -59.715 -43.736 59.195 1.00 86.12 C
ATOM 24 P C B1177 -64.760 -46.297 58.408 1.00 77.49 P
ATOM 25 OP1 C B1177 -65.685 -46.736 57.355 1.00 77.76 O
ATOM 26 OP2 C B1177 -64.990 -46.757 59.792 1.00 77.75 O
ATOM 27 O5' C B1177 -63.279 -46.618 57.991 1.00 77.17 O
TER
ATOM 2 P C A1172 -60.552 -36.993 56.858 1.00 74.93 P
ATOM 3 OP1 C A1172 -60.957 -35.907 57.784 1.00 74.86 O
ATOM 4 OP2 C A1172 -59.525 -36.711 55.829 1.00 74.65 O
ATOM 5 O5' C A1172 -60.138 -38.281 57.678 1.00 75.07 O
ATOM 6 C5' C A1172 -60.891 -38.691 58.796 1.00 75.34 C
ATOM 7 C4' C A1172 -60.023 -39.314 59.852 1.00 75.30 C
ATOM 8 O4' C A1172 -59.405 -40.503 59.317 1.00 75.38 O
ATOM 9 C3' C A1172 -58.887 -38.439 60.375 1.00 74.92 C
ATOM 10 O3' C A1172 -58.689 -38.713 61.748 1.00 75.01 O
ATOM 11 C2' C A1172 -57.682 -38.936 59.593 1.00 74.74 C
ATOM 12 O2' C A1172 -56.439 -38.740 60.236 1.00 74.50 O
ATOM 13 C1' C A1172 -58.000 -40.410 59.439 1.00 75.09 C
ATOM 14 N1 C A1172 -57.417 -41.007 58.245 1.00 75.04 N
ATOM 15 C2 C A1172 -56.404 -41.950 58.408 1.00 75.06 C
ATOM 16 O2 C A1172 -56.011 -42.238 59.565 1.00 75.11 O
ATOM 17 N3 C A1172 -55.899 -42.500 57.277 1.00 75.05 N
ATOM 18 C4 C A1172 -56.365 -42.140 56.065 1.00 75.02 C
ATOM 19 N4 C A1172 -55.830 -42.716 54.972 1.00 75.02 N
ATOM 20 C5 C A1172 -57.398 -41.172 55.910 1.00 75.01 C
ATOM 21 C6 C A1172 -57.893 -40.630 57.021 1.00 75.02 C
ATOM 22 P U A1173 -59.201 -37.672 62.851 1.00 85.23 P
ATOM 23 OP1 U A1173 -60.119 -36.700 62.163 1.00 85.20 O
ATOM 24 OP2 U A1173 -57.983 -37.151 63.548 1.00 84.93 O
ATOM 25 O5' U A1173 -60.033 -38.601 63.828 1.00 85.67 O
TER
ATOM 1 O3' A B1175 -67.381 -40.055 61.319 1.00 83.21 O
ATOM 2 P A B1176 -66.790 -40.768 60.012 1.00 87.29 P
ATOM 3 OP1 A B1176 -65.733 -39.878 59.461 1.00 86.80 O
ATOM 4 OP2 A B1176 -67.938 -41.110 59.158 1.00 87.64 O
ATOM 5 O5' A B1176 -66.144 -42.120 60.593 1.00 87.41 O
ATOM 6 C5' A B1176 -64.730 -42.317 60.672 1.00 87.08 C
ATOM 7 C4' A B1176 -64.092 -42.484 59.310 1.00 86.87 C
ATOM 8 O4' A B1176 -62.836 -41.754 59.277 1.00 86.41 O
ATOM 9 C3' A B1176 -63.696 -43.901 58.907 1.00 87.04 C
ATOM 10 O3' A B1176 -64.794 -44.676 58.409 1.00 87.45 O
ATOM 11 C2' A B1176 -62.601 -43.629 57.876 1.00 86.67 C
ATOM 12 O2' A B1176 -63.159 -43.134 56.670 1.00 86.65 O
ATOM 13 C1' A B1176 -61.862 -42.485 58.552 1.00 86.29 C
ATOM 14 N9 A B1176 -60.837 -42.989 59.502 1.00 86.21 N
ATOM 15 C8 A B1176 -60.816 -42.878 60.880 1.00 86.27 C
ATOM 16 N7 A B1176 -59.800 -43.470 61.471 1.00 86.23 N
ATOM 17 C5 A B1176 -59.102 -44.017 60.403 1.00 86.14 C
ATOM 18 C6 A B1176 -57.933 -44.783 60.361 1.00 86.09 C
ATOM 19 N6 A B1176 -57.277 -45.099 61.467 1.00 86.13 N
ATOM 20 N1 A B1176 -57.455 -45.193 59.169 1.00 86.01 N
ATOM 21 C2 A B1176 -58.157 -44.840 58.087 1.00 86.00 C
ATOM 22 N3 A B1176 -59.285 -44.132 57.989 1.00 86.06 N
ATOM 23 C4 A B1176 -59.715 -43.736 59.195 1.00 86.12 C
ATOM 24 P C B1177 -64.760 -46.297 58.408 1.00 77.49 P
ATOM 25 OP1 C B1177 -65.685 -46.736 57.355 1.00 77.76 O
ATOM 26 OP2 C B1177 -64.990 -46.757 59.792 1.00 77.75 O
ATOM 27 O5' C B1177 -63.279 -46.618 57.991 1.00 77.17 O
TER
Atoms:
C2: (-56.404,-41.950,58.408)
OP1: (-60.957,-35.907,57.784)
OP2: (-59.525,-36.711,55.829)
C4: (-56.365,-42.140,56.065)
O5': (-60.138,-38.281,57.678)
C3': (-58.887,-38.439,60.375)
C1': (-58.000,-40.410,59.439)
O4': (-59.405,-40.503,59.317)
C5': (-60.891,-38.691,58.796)
P: (-60.552,-36.993,56.858)
O2: (-56.011,-42.238,59.565)
C4': (-60.023,-39.314,59.852)
C2': (-57.682,-38.936,59.593)
O2': (-56.439,-38.740,60.236)
N1: (-57.417,-41.007,58.245)
N3: (-55.899,-42.500,57.277)
N4: (-55.830,-42.716,54.972)
C6: (-57.893,-40.630,57.021)
C5: (-57.398,-41.172,55.910)
O3': (-58.689,-38.713,61.748)
OP1: (-60.957,-35.907,57.784)
OP2: (-59.525,-36.711,55.829)
C4: (-56.365,-42.140,56.065)
O5': (-60.138,-38.281,57.678)
C3': (-58.887,-38.439,60.375)
C1': (-58.000,-40.410,59.439)
O4': (-59.405,-40.503,59.317)
C5': (-60.891,-38.691,58.796)
P: (-60.552,-36.993,56.858)
O2: (-56.011,-42.238,59.565)
C4': (-60.023,-39.314,59.852)
C2': (-57.682,-38.936,59.593)
O2': (-56.439,-38.740,60.236)
N1: (-57.417,-41.007,58.245)
N3: (-55.899,-42.500,57.277)
N4: (-55.830,-42.716,54.972)
C6: (-57.893,-40.630,57.021)
C5: (-57.398,-41.172,55.910)
O3': (-58.689,-38.713,61.748)
OP1: (-65.733,-39.878,59.461)
OP2: (-67.938,-41.110,59.158)
C3': (-63.696,-43.901,58.907)
C1': (-61.862,-42.485,58.552)
C5': (-64.730,-42.317,60.672)
O4': (-62.836,-41.754,59.277)
C8: (-60.816,-42.878,60.880)
O2': (-63.159,-43.134,56.670)
C6: (-57.933,-44.783,60.361)
C5: (-59.102,-44.017,60.403)
C4: (-59.715,-43.736,59.195)
P: (-66.790,-40.768,60.012)
C4': (-64.092,-42.484,59.310)
C2': (-62.601,-43.629,57.876)
C2: (-58.157,-44.840,58.087)
N1: (-57.455,-45.193,59.169)
N3: (-59.285,-44.132,57.989)
N6: (-57.277,-45.099,61.467)
N7: (-59.800,-43.470,61.471)
N9: (-60.837,-42.989,59.502)
O5': (-66.144,-42.120,60.593)
O3': (-64.794,-44.676,58.409)
OP2: (-67.938,-41.110,59.158)
C3': (-63.696,-43.901,58.907)
C1': (-61.862,-42.485,58.552)
C5': (-64.730,-42.317,60.672)
O4': (-62.836,-41.754,59.277)
C8: (-60.816,-42.878,60.880)
O2': (-63.159,-43.134,56.670)
C6: (-57.933,-44.783,60.361)
C5: (-59.102,-44.017,60.403)
C4: (-59.715,-43.736,59.195)
P: (-66.790,-40.768,60.012)
C4': (-64.092,-42.484,59.310)
C2': (-62.601,-43.629,57.876)
C2: (-58.157,-44.840,58.087)
N1: (-57.455,-45.193,59.169)
N3: (-59.285,-44.132,57.989)
N6: (-57.277,-45.099,61.467)
N7: (-59.800,-43.470,61.471)
N9: (-60.837,-42.989,59.502)
O5': (-66.144,-42.120,60.593)
O3': (-64.794,-44.676,58.409)
Image (generated by PyMOL):