Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.715 79.914 67.771 1.00 65.19 O
ATOM 2 P C A1234 5.111 80.023 66.219 1.00 65.30 P
ATOM 3 OP1 C A1234 4.567 78.833 65.521 1.00 66.79 O
ATOM 4 OP2 C A1234 6.565 80.302 66.143 1.00 67.62 O
ATOM 5 O5' C A1234 4.312 81.311 65.733 1.00 64.25 O
ATOM 6 C5' C A1234 2.882 81.329 65.770 1.00 63.99 C
ATOM 7 C4' C A1234 2.359 82.698 65.425 1.00 65.53 C
ATOM 8 O4' C A1234 2.658 83.630 66.494 1.00 67.48 O
ATOM 9 C3' C A1234 2.960 83.360 64.201 1.00 66.16 C
ATOM 10 O3' C A1234 2.425 82.856 62.994 1.00 66.78 O
ATOM 11 C2' C A1234 2.614 84.821 64.442 1.00 67.16 C
ATOM 12 O2' C A1234 1.264 85.130 64.157 1.00 67.13 O
ATOM 13 C1' C A1234 2.848 84.930 65.950 1.00 67.66 C
ATOM 14 N1 C A1234 4.221 85.383 66.257 1.00 68.72 N
ATOM 15 C2 C A1234 4.469 86.762 66.368 1.00 69.37 C
ATOM 16 O2 C A1234 3.517 87.562 66.271 1.00 71.09 O
ATOM 17 N3 C A1234 5.734 87.187 66.583 1.00 68.78 N
ATOM 18 C4 C A1234 6.724 86.304 66.706 1.00 68.43 C
ATOM 19 N4 C A1234 7.955 86.775 66.902 1.00 69.11 N
ATOM 20 C5 C A1234 6.497 84.898 66.631 1.00 68.67 C
ATOM 21 C6 C A1234 5.245 84.486 66.409 1.00 68.69 C
ATOM 22 P U A1235 3.391 82.666 61.732 1.00 69.34 P
ATOM 23 OP1 U A1235 2.593 82.167 60.592 1.00 71.42 O
ATOM 24 OP2 U A1235 4.570 81.889 62.184 1.00 69.82 O
ATOM 25 O5' U A1235 3.843 84.156 61.409 1.00 69.55 O
TER
ATOM 1 O3' A B1239 7.977 98.488 65.985 1.00104.23 O
ATOM 2 P C B1240 7.341 98.276 67.447 1.00104.30 P
ATOM 3 OP1 C B1240 7.379 99.578 68.162 1.00104.08 O
ATOM 4 OP2 C B1240 7.962 97.077 68.068 1.00104.39 O
ATOM 5 O5' C B1240 5.813 97.941 67.160 1.00102.08 O
ATOM 6 C5' C B1240 5.001 97.345 68.173 1.00 98.08 C
ATOM 7 C4' C B1240 3.671 96.933 67.603 1.00 95.62 C
ATOM 8 O4' C B1240 3.856 95.997 66.511 1.00 94.68 O
ATOM 9 C3' C B1240 2.816 96.172 68.590 1.00 94.87 C
ATOM 10 O3' C B1240 2.148 97.064 69.454 1.00 93.58 O
ATOM 11 C2' C B1240 1.880 95.383 67.689 1.00 94.61 C
ATOM 12 O2' C B1240 0.802 96.156 67.199 1.00 94.17 O
ATOM 13 C1' C B1240 2.825 95.017 66.541 1.00 94.32 C
ATOM 14 N1 C B1240 3.445 93.680 66.667 1.00 93.49 N
ATOM 15 C2 C B1240 2.627 92.533 66.601 1.00 93.59 C
ATOM 16 O2 C B1240 1.393 92.668 66.493 1.00 94.18 O
ATOM 17 N3 C B1240 3.204 91.310 66.662 1.00 92.62 N
ATOM 18 C4 C B1240 4.528 91.201 66.799 1.00 91.26 C
ATOM 19 N4 C B1240 5.052 89.978 66.840 1.00 90.73 N
ATOM 20 C5 C B1240 5.373 92.342 66.896 1.00 91.39 C
ATOM 21 C6 C B1240 4.798 93.548 66.827 1.00 92.38 C
ATOM 22 P U B1241 2.173 96.789 71.026 1.00 93.12 P
ATOM 23 OP1 U B1241 1.290 97.802 71.655 1.00 93.93 O
ATOM 24 OP2 U B1241 3.589 96.670 71.459 1.00 92.58 O
ATOM 25 O5' U B1241 1.472 95.367 71.152 1.00 91.90 O
TER
ATOM 2 P C A1234 5.111 80.023 66.219 1.00 65.30 P
ATOM 3 OP1 C A1234 4.567 78.833 65.521 1.00 66.79 O
ATOM 4 OP2 C A1234 6.565 80.302 66.143 1.00 67.62 O
ATOM 5 O5' C A1234 4.312 81.311 65.733 1.00 64.25 O
ATOM 6 C5' C A1234 2.882 81.329 65.770 1.00 63.99 C
ATOM 7 C4' C A1234 2.359 82.698 65.425 1.00 65.53 C
ATOM 8 O4' C A1234 2.658 83.630 66.494 1.00 67.48 O
ATOM 9 C3' C A1234 2.960 83.360 64.201 1.00 66.16 C
ATOM 10 O3' C A1234 2.425 82.856 62.994 1.00 66.78 O
ATOM 11 C2' C A1234 2.614 84.821 64.442 1.00 67.16 C
ATOM 12 O2' C A1234 1.264 85.130 64.157 1.00 67.13 O
ATOM 13 C1' C A1234 2.848 84.930 65.950 1.00 67.66 C
ATOM 14 N1 C A1234 4.221 85.383 66.257 1.00 68.72 N
ATOM 15 C2 C A1234 4.469 86.762 66.368 1.00 69.37 C
ATOM 16 O2 C A1234 3.517 87.562 66.271 1.00 71.09 O
ATOM 17 N3 C A1234 5.734 87.187 66.583 1.00 68.78 N
ATOM 18 C4 C A1234 6.724 86.304 66.706 1.00 68.43 C
ATOM 19 N4 C A1234 7.955 86.775 66.902 1.00 69.11 N
ATOM 20 C5 C A1234 6.497 84.898 66.631 1.00 68.67 C
ATOM 21 C6 C A1234 5.245 84.486 66.409 1.00 68.69 C
ATOM 22 P U A1235 3.391 82.666 61.732 1.00 69.34 P
ATOM 23 OP1 U A1235 2.593 82.167 60.592 1.00 71.42 O
ATOM 24 OP2 U A1235 4.570 81.889 62.184 1.00 69.82 O
ATOM 25 O5' U A1235 3.843 84.156 61.409 1.00 69.55 O
TER
ATOM 1 O3' A B1239 7.977 98.488 65.985 1.00104.23 O
ATOM 2 P C B1240 7.341 98.276 67.447 1.00104.30 P
ATOM 3 OP1 C B1240 7.379 99.578 68.162 1.00104.08 O
ATOM 4 OP2 C B1240 7.962 97.077 68.068 1.00104.39 O
ATOM 5 O5' C B1240 5.813 97.941 67.160 1.00102.08 O
ATOM 6 C5' C B1240 5.001 97.345 68.173 1.00 98.08 C
ATOM 7 C4' C B1240 3.671 96.933 67.603 1.00 95.62 C
ATOM 8 O4' C B1240 3.856 95.997 66.511 1.00 94.68 O
ATOM 9 C3' C B1240 2.816 96.172 68.590 1.00 94.87 C
ATOM 10 O3' C B1240 2.148 97.064 69.454 1.00 93.58 O
ATOM 11 C2' C B1240 1.880 95.383 67.689 1.00 94.61 C
ATOM 12 O2' C B1240 0.802 96.156 67.199 1.00 94.17 O
ATOM 13 C1' C B1240 2.825 95.017 66.541 1.00 94.32 C
ATOM 14 N1 C B1240 3.445 93.680 66.667 1.00 93.49 N
ATOM 15 C2 C B1240 2.627 92.533 66.601 1.00 93.59 C
ATOM 16 O2 C B1240 1.393 92.668 66.493 1.00 94.18 O
ATOM 17 N3 C B1240 3.204 91.310 66.662 1.00 92.62 N
ATOM 18 C4 C B1240 4.528 91.201 66.799 1.00 91.26 C
ATOM 19 N4 C B1240 5.052 89.978 66.840 1.00 90.73 N
ATOM 20 C5 C B1240 5.373 92.342 66.896 1.00 91.39 C
ATOM 21 C6 C B1240 4.798 93.548 66.827 1.00 92.38 C
ATOM 22 P U B1241 2.173 96.789 71.026 1.00 93.12 P
ATOM 23 OP1 U B1241 1.290 97.802 71.655 1.00 93.93 O
ATOM 24 OP2 U B1241 3.589 96.670 71.459 1.00 92.58 O
ATOM 25 O5' U B1241 1.472 95.367 71.152 1.00 91.90 O
TER
Atoms:
C2: (4.469,86.762,66.368)
OP1: (4.567,78.833,65.521)
OP2: (6.565,80.302,66.143)
C4: (6.724,86.304,66.706)
O5': (4.312,81.311,65.733)
C3': (2.960,83.360,64.201)
C1': (2.848,84.930,65.950)
O4': (2.658,83.630,66.494)
C5': (2.882,81.329,65.770)
P: (5.111,80.023,66.219)
O2: (3.517,87.562,66.271)
C4': (2.359,82.698,65.425)
C2': (2.614,84.821,64.442)
O2': (1.264,85.130,64.157)
N1: (4.221,85.383,66.257)
N3: (5.734,87.187,66.583)
N4: (7.955,86.775,66.902)
C6: (5.245,84.486,66.409)
C5: (6.497,84.898,66.631)
O3': (2.425,82.856,62.994)
OP1: (4.567,78.833,65.521)
OP2: (6.565,80.302,66.143)
C4: (6.724,86.304,66.706)
O5': (4.312,81.311,65.733)
C3': (2.960,83.360,64.201)
C1': (2.848,84.930,65.950)
O4': (2.658,83.630,66.494)
C5': (2.882,81.329,65.770)
P: (5.111,80.023,66.219)
O2: (3.517,87.562,66.271)
C4': (2.359,82.698,65.425)
C2': (2.614,84.821,64.442)
O2': (1.264,85.130,64.157)
N1: (4.221,85.383,66.257)
N3: (5.734,87.187,66.583)
N4: (7.955,86.775,66.902)
C6: (5.245,84.486,66.409)
C5: (6.497,84.898,66.631)
O3': (2.425,82.856,62.994)
C2: (2.627,92.533,66.601)
OP1: (7.379,99.578,68.162)
OP2: (7.962,97.077,68.068)
C4: (4.528,91.201,66.799)
O5': (5.813,97.941,67.160)
C3': (2.816,96.172,68.590)
C1': (2.825,95.017,66.541)
O4': (3.856,95.997,66.511)
C5': (5.001,97.345,68.173)
P: (7.341,98.276,67.447)
O2: (1.393,92.668,66.493)
C4': (3.671,96.933,67.603)
C2': (1.880,95.383,67.689)
O2': (0.802,96.156,67.199)
N1: (3.445,93.680,66.667)
N3: (3.204,91.310,66.662)
N4: (5.052,89.978,66.840)
C6: (4.798,93.548,66.827)
C5: (5.373,92.342,66.896)
O3': (2.148,97.064,69.454)
OP1: (7.379,99.578,68.162)
OP2: (7.962,97.077,68.068)
C4: (4.528,91.201,66.799)
O5': (5.813,97.941,67.160)
C3': (2.816,96.172,68.590)
C1': (2.825,95.017,66.541)
O4': (3.856,95.997,66.511)
C5': (5.001,97.345,68.173)
P: (7.341,98.276,67.447)
O2: (1.393,92.668,66.493)
C4': (3.671,96.933,67.603)
C2': (1.880,95.383,67.689)
O2': (0.802,96.156,67.199)
N1: (3.445,93.680,66.667)
N3: (3.204,91.310,66.662)
N4: (5.052,89.978,66.840)
C6: (4.798,93.548,66.827)
C5: (5.373,92.342,66.896)
O3': (2.148,97.064,69.454)
Image (generated by PyMOL):