ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1410:A1411

Extra

PDB:
ATOM 1 O3' U A1409 -3.976 -62.572 14.008 1.00 54.01 O
ATOM 2 P U A1410 -4.890 -63.567 13.166 1.00 71.14 P
ATOM 3 OP1 U A1410 -4.121 -64.803 12.899 1.00 81.75 O
ATOM 4 OP2 U A1410 -5.484 -62.797 12.052 1.00 64.74 O
ATOM 5 O5' U A1410 -6.012 -63.931 14.239 1.00 75.67 O
ATOM 6 C5' U A1410 -5.593 -64.514 15.462 1.00 70.29 C
ATOM 7 C4' U A1410 -6.790 -64.917 16.296 1.00 65.87 C
ATOM 8 O4' U A1410 -7.332 -63.759 16.972 1.00 78.91 O
ATOM 9 C3' U A1410 -7.953 -65.458 15.495 1.00 55.68 C
ATOM 10 O3' U A1410 -7.704 -66.816 15.225 1.00 64.58 O
ATOM 11 C2' U A1410 -9.061 -65.283 16.525 1.00 65.28 C
ATOM 12 O2' U A1410 -8.983 -66.240 17.564 1.00 84.27 O
ATOM 13 C1' U A1410 -8.726 -63.923 17.122 1.00 68.21 C
ATOM 14 N1 U A1410 -9.412 -62.774 16.477 1.00 65.43 N
ATOM 15 C2 U A1410 -10.729 -62.532 16.792 1.00 70.15 C
ATOM 16 O2 U A1410 -11.369 -63.218 17.572 1.00 75.81 O
ATOM 17 N3 U A1410 -11.278 -61.450 16.154 1.00 69.46 N
ATOM 18 C4 U A1410 -10.652 -60.607 15.259 1.00 68.08 C
ATOM 19 O4 U A1410 -11.286 -59.677 14.769 1.00 83.68 O
ATOM 20 C5 U A1410 -9.276 -60.926 14.986 1.00 73.90 C
ATOM 21 C6 U A1410 -8.721 -61.977 15.592 1.00 71.54 C
ATOM 22 P A A1411 -8.161 -67.480 13.841 1.00 68.83 P
ATOM 23 OP1 A A1411 -7.555 -68.831 13.818 1.00 65.30 O
ATOM 24 OP2 A A1411 -7.897 -66.520 12.747 1.00 65.25 O
ATOM 25 O5' A A1411 -9.749 -67.667 13.989 1.00 65.81 O
TER

ATOM 1 O3' U B1410 -7.704 -66.816 15.225 1.00 64.58 O
ATOM 2 P A B1411 -8.161 -67.480 13.841 1.00 68.83 P
ATOM 3 OP1 A B1411 -7.555 -68.831 13.818 1.00 65.30 O
ATOM 4 OP2 A B1411 -7.897 -66.520 12.747 1.00 65.25 O
ATOM 5 O5' A B1411 -9.749 -67.667 13.989 1.00 65.81 O
ATOM 6 C5' A B1411 -10.488 -68.289 12.941 1.00 69.58 C
ATOM 7 C4' A B1411 -11.994 -68.111 13.101 1.00 66.14 C
ATOM 8 O4' A B1411 -12.605 -69.301 13.659 1.00 57.87 O
ATOM 9 C3' A B1411 -12.419 -66.941 13.976 1.00 60.97 C
ATOM 10 O3' A B1411 -12.868 -65.902 13.113 1.00 55.27 O
ATOM 11 C2' A B1411 -13.582 -67.497 14.786 1.00 61.63 C
ATOM 12 O2' A B1411 -14.811 -67.327 14.105 1.00 68.39 O
ATOM 13 C1' A B1411 -13.265 -68.979 14.857 1.00 58.47 C
ATOM 14 N9 A B1411 -12.376 -69.366 15.934 1.00 59.96 N
ATOM 15 C8 A B1411 -11.063 -69.043 16.071 1.00 55.44 C
ATOM 16 N7 A B1411 -10.513 -69.556 17.146 1.00 66.84 N
ATOM 17 C5 A B1411 -11.538 -70.266 17.749 1.00 65.43 C
ATOM 18 C6 A B1411 -11.606 -71.038 18.926 1.00 62.26 C
ATOM 19 N6 A B1411 -10.562 -71.221 19.735 1.00 74.45 N
ATOM 20 N1 A B1411 -12.782 -71.610 19.246 1.00 61.79 N
ATOM 21 C2 A B1411 -13.816 -71.419 18.425 1.00 66.51 C
ATOM 22 N3 A B1411 -13.873 -70.716 17.296 1.00 65.89 N
ATOM 23 C4 A B1411 -12.692 -70.160 17.009 1.00 64.80 C
ATOM 24 P A B1412 -12.571 -64.364 13.445 1.00 51.39 P
ATOM 25 OP1 A B1412 -13.133 -63.590 12.309 1.00 53.72 O
ATOM 26 OP2 A B1412 -11.150 -64.215 13.852 1.00 69.05 O
ATOM 27 O5' A B1412 -13.473 -64.116 14.734 1.00 56.27 O
TER

Atoms:
C4: (-10.652,-60.607,15.259)
N3: (-11.278,-61.450,16.154)
OP1: (-4.121,-64.803,12.899)
OP2: (-5.484,-62.797,12.052)
C2: (-10.729,-62.532,16.792)
C1': (-8.726,-63.923,17.122)
C3': (-7.953,-65.458,15.495)
O5': (-6.012,-63.931,14.239)
O4': (-7.332,-63.759,16.972)
C5': (-5.593,-64.514,15.462)
P: (-4.890,-63.567,13.166)
C4': (-6.790,-64.917,16.296)
C2': (-9.061,-65.283,16.525)
O2': (-8.983,-66.240,17.564)
N1: (-9.412,-62.774,16.477)
O4: (-11.286,-59.677,14.769)
O2: (-11.369,-63.218,17.572)
C6: (-8.721,-61.977,15.592)
C5: (-9.276,-60.926,14.986)
O3': (-7.704,-66.816,15.225)
OP1: (-7.555,-68.831,13.818)
OP2: (-7.897,-66.520,12.747)
C3': (-12.419,-66.941,13.976)
C1': (-13.265,-68.979,14.857)
C5': (-10.488,-68.289,12.941)
O4': (-12.605,-69.301,13.659)
C8: (-11.063,-69.043,16.071)
O2': (-14.811,-67.327,14.105)
C6: (-11.606,-71.038,18.926)
C5: (-11.538,-70.266,17.749)
C4: (-12.692,-70.160,17.009)
P: (-8.161,-67.480,13.841)
C4': (-11.994,-68.111,13.101)
C2': (-13.582,-67.497,14.786)
C2: (-13.816,-71.419,18.425)
N1: (-12.782,-71.610,19.246)
N3: (-13.873,-70.716,17.296)
N6: (-10.562,-71.221,19.735)
N7: (-10.513,-69.556,17.146)
N9: (-12.376,-69.366,15.934)
O5': (-9.749,-67.667,13.989)
O3': (-12.868,-65.902,13.113)
Image (generated by PyMOL):
PyMOL image
show in jmol