Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A279:A349
Extra
PDB:
ATOM 1 O3' C A 278 61.511 128.558 -1.968 1.00 68.72 O
ATOM 2 P C A 279 60.489 129.071 -0.834 1.00 66.89 P
ATOM 3 OP1 C A 279 60.320 130.535 -0.997 1.00 66.51 O
ATOM 4 OP2 C A 279 60.970 128.531 0.464 1.00 67.36 O
ATOM 5 O5' C A 279 59.099 128.393 -1.219 1.00 66.13 O
ATOM 6 C5' C A 279 58.485 128.663 -2.495 1.00 66.18 C
ATOM 7 C4' C A 279 57.305 127.742 -2.730 1.00 66.57 C
ATOM 8 O4' C A 279 57.744 126.356 -2.717 1.00 66.92 O
ATOM 9 C3' C A 279 56.194 127.791 -1.693 1.00 65.59 C
ATOM 10 O3' C A 279 55.299 128.872 -1.943 1.00 65.57 O
ATOM 11 C2' C A 279 55.510 126.444 -1.895 1.00 65.76 C
ATOM 12 O2' C A 279 54.640 126.456 -3.011 1.00 64.35 O
ATOM 13 C1' C A 279 56.709 125.533 -2.190 1.00 66.07 C
ATOM 14 N1 C A 279 57.238 124.792 -1.018 1.00 65.61 N
ATOM 15 C2 C A 279 56.541 123.657 -0.559 1.00 65.11 C
ATOM 16 O2 C A 279 55.486 123.324 -1.125 1.00 64.64 O
ATOM 17 N3 C A 279 57.036 122.958 0.491 1.00 65.13 N
ATOM 18 C4 C A 279 58.166 123.353 1.085 1.00 65.50 C
ATOM 19 N4 C A 279 58.622 122.626 2.114 1.00 66.88 N
ATOM 20 C5 C A 279 58.883 124.507 0.653 1.00 64.75 C
ATOM 21 C6 C A 279 58.390 125.189 -0.392 1.00 64.70 C
ATOM 22 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 23 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 24 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 25 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
TER
ATOM 1 O3' A B 348 53.834 113.925 4.715 1.00 71.61 O
ATOM 2 P C B 349 54.457 113.581 3.277 1.00 75.20 P
ATOM 3 OP1 C B 349 54.296 112.118 3.101 1.00 76.09 O
ATOM 4 OP2 C B 349 55.810 114.188 3.167 1.00 75.16 O
ATOM 5 O5' C B 349 53.481 114.316 2.255 1.00 75.50 O
ATOM 6 C5' C B 349 52.133 113.857 2.075 1.00 76.88 C
ATOM 7 C4' C B 349 51.392 114.769 1.134 1.00 78.81 C
ATOM 8 O4' C B 349 51.306 116.097 1.714 1.00 78.68 O
ATOM 9 C3' C B 349 52.042 115.009 -0.217 1.00 80.15 C
ATOM 10 O3' C B 349 51.804 113.939 -1.129 1.00 81.40 O
ATOM 11 C2' C B 349 51.383 116.312 -0.654 1.00 79.50 C
ATOM 12 O2' C B 349 50.073 116.122 -1.150 1.00 79.76 O
ATOM 13 C1' C B 349 51.305 117.069 0.676 1.00 78.32 C
ATOM 14 N1 C B 349 52.429 118.006 0.887 1.00 76.52 N
ATOM 15 C2 C B 349 52.335 119.312 0.363 1.00 75.67 C
ATOM 16 O2 C B 349 51.295 119.655 -0.229 1.00 74.82 O
ATOM 17 N3 C B 349 53.377 120.164 0.521 1.00 74.91 N
ATOM 18 C4 C B 349 54.471 119.767 1.178 1.00 74.81 C
ATOM 19 N4 C B 349 55.479 120.636 1.301 1.00 73.87 N
ATOM 20 C5 C B 349 54.584 118.459 1.735 1.00 75.00 C
ATOM 21 C6 C B 349 53.552 117.619 1.567 1.00 75.45 C
ATOM 22 P G B 350 52.914 113.578 -2.235 1.00 82.37 P
ATOM 23 OP1 G B 350 52.346 112.499 -3.086 1.00 82.92 O
ATOM 24 OP2 G B 350 54.216 113.356 -1.541 1.00 81.24 O
ATOM 25 O5' G B 350 53.005 114.907 -3.120 1.00 83.09 O
TER
ATOM 2 P C A 279 60.489 129.071 -0.834 1.00 66.89 P
ATOM 3 OP1 C A 279 60.320 130.535 -0.997 1.00 66.51 O
ATOM 4 OP2 C A 279 60.970 128.531 0.464 1.00 67.36 O
ATOM 5 O5' C A 279 59.099 128.393 -1.219 1.00 66.13 O
ATOM 6 C5' C A 279 58.485 128.663 -2.495 1.00 66.18 C
ATOM 7 C4' C A 279 57.305 127.742 -2.730 1.00 66.57 C
ATOM 8 O4' C A 279 57.744 126.356 -2.717 1.00 66.92 O
ATOM 9 C3' C A 279 56.194 127.791 -1.693 1.00 65.59 C
ATOM 10 O3' C A 279 55.299 128.872 -1.943 1.00 65.57 O
ATOM 11 C2' C A 279 55.510 126.444 -1.895 1.00 65.76 C
ATOM 12 O2' C A 279 54.640 126.456 -3.011 1.00 64.35 O
ATOM 13 C1' C A 279 56.709 125.533 -2.190 1.00 66.07 C
ATOM 14 N1 C A 279 57.238 124.792 -1.018 1.00 65.61 N
ATOM 15 C2 C A 279 56.541 123.657 -0.559 1.00 65.11 C
ATOM 16 O2 C A 279 55.486 123.324 -1.125 1.00 64.64 O
ATOM 17 N3 C A 279 57.036 122.958 0.491 1.00 65.13 N
ATOM 18 C4 C A 279 58.166 123.353 1.085 1.00 65.50 C
ATOM 19 N4 C A 279 58.622 122.626 2.114 1.00 66.88 N
ATOM 20 C5 C A 279 58.883 124.507 0.653 1.00 64.75 C
ATOM 21 C6 C A 279 58.390 125.189 -0.392 1.00 64.70 C
ATOM 22 P G A 280 54.665 129.683 -0.710 1.00 66.20 P
ATOM 23 OP1 G A 280 53.642 130.631 -1.228 1.00 66.30 O
ATOM 24 OP2 G A 280 55.797 130.203 0.095 1.00 67.89 O
ATOM 25 O5' G A 280 53.911 128.559 0.127 1.00 65.97 O
TER
ATOM 1 O3' A B 348 53.834 113.925 4.715 1.00 71.61 O
ATOM 2 P C B 349 54.457 113.581 3.277 1.00 75.20 P
ATOM 3 OP1 C B 349 54.296 112.118 3.101 1.00 76.09 O
ATOM 4 OP2 C B 349 55.810 114.188 3.167 1.00 75.16 O
ATOM 5 O5' C B 349 53.481 114.316 2.255 1.00 75.50 O
ATOM 6 C5' C B 349 52.133 113.857 2.075 1.00 76.88 C
ATOM 7 C4' C B 349 51.392 114.769 1.134 1.00 78.81 C
ATOM 8 O4' C B 349 51.306 116.097 1.714 1.00 78.68 O
ATOM 9 C3' C B 349 52.042 115.009 -0.217 1.00 80.15 C
ATOM 10 O3' C B 349 51.804 113.939 -1.129 1.00 81.40 O
ATOM 11 C2' C B 349 51.383 116.312 -0.654 1.00 79.50 C
ATOM 12 O2' C B 349 50.073 116.122 -1.150 1.00 79.76 O
ATOM 13 C1' C B 349 51.305 117.069 0.676 1.00 78.32 C
ATOM 14 N1 C B 349 52.429 118.006 0.887 1.00 76.52 N
ATOM 15 C2 C B 349 52.335 119.312 0.363 1.00 75.67 C
ATOM 16 O2 C B 349 51.295 119.655 -0.229 1.00 74.82 O
ATOM 17 N3 C B 349 53.377 120.164 0.521 1.00 74.91 N
ATOM 18 C4 C B 349 54.471 119.767 1.178 1.00 74.81 C
ATOM 19 N4 C B 349 55.479 120.636 1.301 1.00 73.87 N
ATOM 20 C5 C B 349 54.584 118.459 1.735 1.00 75.00 C
ATOM 21 C6 C B 349 53.552 117.619 1.567 1.00 75.45 C
ATOM 22 P G B 350 52.914 113.578 -2.235 1.00 82.37 P
ATOM 23 OP1 G B 350 52.346 112.499 -3.086 1.00 82.92 O
ATOM 24 OP2 G B 350 54.216 113.356 -1.541 1.00 81.24 O
ATOM 25 O5' G B 350 53.005 114.907 -3.120 1.00 83.09 O
TER
Atoms:
C2: (56.541,123.657,-0.559)
OP1: (60.320,130.535,-0.997)
OP2: (60.970,128.531,0.464)
C4: (58.166,123.353,1.085)
O5': (59.099,128.393,-1.219)
C3': (56.194,127.791,-1.693)
C1': (56.709,125.533,-2.190)
O4': (57.744,126.356,-2.717)
C5': (58.485,128.663,-2.495)
P: (60.489,129.071,-0.834)
O2: (55.486,123.324,-1.125)
C4': (57.305,127.742,-2.730)
C2': (55.510,126.444,-1.895)
O2': (54.640,126.456,-3.011)
N1: (57.238,124.792,-1.018)
N3: (57.036,122.958,0.491)
N4: (58.622,122.626,2.114)
C6: (58.390,125.189,-0.392)
C5: (58.883,124.507,0.653)
O3': (55.299,128.872,-1.943)
OP1: (60.320,130.535,-0.997)
OP2: (60.970,128.531,0.464)
C4: (58.166,123.353,1.085)
O5': (59.099,128.393,-1.219)
C3': (56.194,127.791,-1.693)
C1': (56.709,125.533,-2.190)
O4': (57.744,126.356,-2.717)
C5': (58.485,128.663,-2.495)
P: (60.489,129.071,-0.834)
O2: (55.486,123.324,-1.125)
C4': (57.305,127.742,-2.730)
C2': (55.510,126.444,-1.895)
O2': (54.640,126.456,-3.011)
N1: (57.238,124.792,-1.018)
N3: (57.036,122.958,0.491)
N4: (58.622,122.626,2.114)
C6: (58.390,125.189,-0.392)
C5: (58.883,124.507,0.653)
O3': (55.299,128.872,-1.943)
C2: (52.335,119.312,0.363)
OP1: (54.296,112.118,3.101)
OP2: (55.810,114.188,3.167)
C4: (54.471,119.767,1.178)
O5': (53.481,114.316,2.255)
C3': (52.042,115.009,-0.217)
C1': (51.305,117.069,0.676)
O4': (51.306,116.097,1.714)
C5': (52.133,113.857,2.075)
P: (54.457,113.581,3.277)
O2: (51.295,119.655,-0.229)
C4': (51.392,114.769,1.134)
C2': (51.383,116.312,-0.654)
O2': (50.073,116.122,-1.150)
N1: (52.429,118.006,0.887)
N3: (53.377,120.164,0.521)
N4: (55.479,120.636,1.301)
C6: (53.552,117.619,1.567)
C5: (54.584,118.459,1.735)
O3': (51.804,113.939,-1.129)
OP1: (54.296,112.118,3.101)
OP2: (55.810,114.188,3.167)
C4: (54.471,119.767,1.178)
O5': (53.481,114.316,2.255)
C3': (52.042,115.009,-0.217)
C1': (51.305,117.069,0.676)
O4': (51.306,116.097,1.714)
C5': (52.133,113.857,2.075)
P: (54.457,113.581,3.277)
O2: (51.295,119.655,-0.229)
C4': (51.392,114.769,1.134)
C2': (51.383,116.312,-0.654)
O2': (50.073,116.122,-1.150)
N1: (52.429,118.006,0.887)
N3: (53.377,120.164,0.521)
N4: (55.479,120.636,1.301)
C6: (53.552,117.619,1.567)
C5: (54.584,118.459,1.735)
O3': (51.804,113.939,-1.129)
Image (generated by PyMOL):