Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.276 98.191 121.950 1.00 59.67 O
ATOM 2 P C A 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 3 OP1 C A 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 4 OP2 C A 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 5 O5' C A 559 -6.343 97.530 123.225 1.00 62.19 O
ATOM 6 C5' C A 559 -6.949 98.816 123.458 1.00 63.79 C
ATOM 7 C4' C A 559 -8.445 98.715 123.280 1.00 66.27 C
ATOM 8 O4' C A 559 -8.726 98.305 121.914 1.00 66.28 O
ATOM 9 C3' C A 559 -9.118 97.645 124.127 1.00 67.96 C
ATOM 10 O3' C A 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 11 C2' C A 559 -10.376 97.342 123.326 1.00 67.73 C
ATOM 12 O2' C A 559 -11.381 98.324 123.504 1.00 68.89 O
ATOM 13 C1' C A 559 -9.838 97.420 121.896 1.00 66.02 C
ATOM 14 N1 C A 559 -9.393 96.118 121.353 1.00 65.33 N
ATOM 15 C2 C A 559 -10.329 95.297 120.689 1.00 65.48 C
ATOM 16 O2 C A 559 -11.508 95.681 120.590 1.00 67.80 O
ATOM 17 N3 C A 559 -9.923 94.108 120.175 1.00 64.12 N
ATOM 18 C4 C A 559 -8.649 93.723 120.307 1.00 63.13 C
ATOM 19 N4 C A 559 -8.291 92.543 119.783 1.00 60.95 N
ATOM 20 C5 C A 559 -7.683 94.531 120.982 1.00 63.77 C
ATOM 21 C6 C A 559 -8.093 95.708 121.484 1.00 64.06 C
ATOM 22 P G A 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 23 OP1 G A 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 24 OP2 G A 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 25 O5' G A 560 -10.378 95.913 126.270 1.00 71.92 O
TER
ATOM 1 O3' C B 573 -10.600 83.309 116.419 1.00 56.88 O
ATOM 2 P C B 574 -10.571 84.061 114.996 1.00 58.79 P
ATOM 3 OP1 C B 574 -11.522 83.392 114.066 1.00 56.94 O
ATOM 4 OP2 C B 574 -9.137 84.182 114.609 1.00 59.57 O
ATOM 5 O5' C B 574 -11.126 85.521 115.326 1.00 56.49 O
ATOM 6 C5' C B 574 -12.477 85.715 115.760 1.00 55.43 C
ATOM 7 C4' C B 574 -12.672 87.126 116.259 1.00 56.82 C
ATOM 8 O4' C B 574 -11.815 87.366 117.403 1.00 58.26 O
ATOM 9 C3' C B 574 -12.306 88.237 115.294 1.00 57.96 C
ATOM 10 O3' C B 574 -13.363 88.471 114.376 1.00 61.05 O
ATOM 11 C2' C B 574 -12.092 89.421 116.231 1.00 57.96 C
ATOM 12 O2' C B 574 -13.298 90.027 116.648 1.00 58.48 O
ATOM 13 C1' C B 574 -11.436 88.740 117.434 1.00 57.76 C
ATOM 14 N1 C B 574 -9.958 88.835 117.438 1.00 57.74 N
ATOM 15 C2 C B 574 -9.345 89.986 117.993 1.00 57.72 C
ATOM 16 O2 C B 574 -10.059 90.899 118.457 1.00 56.49 O
ATOM 17 N3 C B 574 -7.993 90.071 117.998 1.00 57.80 N
ATOM 18 C4 C B 574 -7.257 89.081 117.476 1.00 57.96 C
ATOM 19 N4 C B 574 -5.924 89.213 117.498 1.00 58.45 N
ATOM 20 C5 C B 574 -7.851 87.913 116.907 1.00 56.71 C
ATOM 21 C6 C B 574 -9.187 87.831 116.911 1.00 56.86 C
ATOM 22 P A B 575 -13.039 89.042 112.908 1.00 62.94 P
ATOM 23 OP1 A B 575 -12.476 90.419 113.063 1.00 63.14 O
ATOM 24 OP2 A B 575 -14.264 88.842 112.089 1.00 62.42 O
ATOM 25 O5' A B 575 -11.912 88.063 112.346 1.00 60.23 O
TER
ATOM 2 P C A 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 3 OP1 C A 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 4 OP2 C A 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 5 O5' C A 559 -6.343 97.530 123.225 1.00 62.19 O
ATOM 6 C5' C A 559 -6.949 98.816 123.458 1.00 63.79 C
ATOM 7 C4' C A 559 -8.445 98.715 123.280 1.00 66.27 C
ATOM 8 O4' C A 559 -8.726 98.305 121.914 1.00 66.28 O
ATOM 9 C3' C A 559 -9.118 97.645 124.127 1.00 67.96 C
ATOM 10 O3' C A 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 11 C2' C A 559 -10.376 97.342 123.326 1.00 67.73 C
ATOM 12 O2' C A 559 -11.381 98.324 123.504 1.00 68.89 O
ATOM 13 C1' C A 559 -9.838 97.420 121.896 1.00 66.02 C
ATOM 14 N1 C A 559 -9.393 96.118 121.353 1.00 65.33 N
ATOM 15 C2 C A 559 -10.329 95.297 120.689 1.00 65.48 C
ATOM 16 O2 C A 559 -11.508 95.681 120.590 1.00 67.80 O
ATOM 17 N3 C A 559 -9.923 94.108 120.175 1.00 64.12 N
ATOM 18 C4 C A 559 -8.649 93.723 120.307 1.00 63.13 C
ATOM 19 N4 C A 559 -8.291 92.543 119.783 1.00 60.95 N
ATOM 20 C5 C A 559 -7.683 94.531 120.982 1.00 63.77 C
ATOM 21 C6 C A 559 -8.093 95.708 121.484 1.00 64.06 C
ATOM 22 P G A 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 23 OP1 G A 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 24 OP2 G A 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 25 O5' G A 560 -10.378 95.913 126.270 1.00 71.92 O
TER
ATOM 1 O3' C B 573 -10.600 83.309 116.419 1.00 56.88 O
ATOM 2 P C B 574 -10.571 84.061 114.996 1.00 58.79 P
ATOM 3 OP1 C B 574 -11.522 83.392 114.066 1.00 56.94 O
ATOM 4 OP2 C B 574 -9.137 84.182 114.609 1.00 59.57 O
ATOM 5 O5' C B 574 -11.126 85.521 115.326 1.00 56.49 O
ATOM 6 C5' C B 574 -12.477 85.715 115.760 1.00 55.43 C
ATOM 7 C4' C B 574 -12.672 87.126 116.259 1.00 56.82 C
ATOM 8 O4' C B 574 -11.815 87.366 117.403 1.00 58.26 O
ATOM 9 C3' C B 574 -12.306 88.237 115.294 1.00 57.96 C
ATOM 10 O3' C B 574 -13.363 88.471 114.376 1.00 61.05 O
ATOM 11 C2' C B 574 -12.092 89.421 116.231 1.00 57.96 C
ATOM 12 O2' C B 574 -13.298 90.027 116.648 1.00 58.48 O
ATOM 13 C1' C B 574 -11.436 88.740 117.434 1.00 57.76 C
ATOM 14 N1 C B 574 -9.958 88.835 117.438 1.00 57.74 N
ATOM 15 C2 C B 574 -9.345 89.986 117.993 1.00 57.72 C
ATOM 16 O2 C B 574 -10.059 90.899 118.457 1.00 56.49 O
ATOM 17 N3 C B 574 -7.993 90.071 117.998 1.00 57.80 N
ATOM 18 C4 C B 574 -7.257 89.081 117.476 1.00 57.96 C
ATOM 19 N4 C B 574 -5.924 89.213 117.498 1.00 58.45 N
ATOM 20 C5 C B 574 -7.851 87.913 116.907 1.00 56.71 C
ATOM 21 C6 C B 574 -9.187 87.831 116.911 1.00 56.86 C
ATOM 22 P A B 575 -13.039 89.042 112.908 1.00 62.94 P
ATOM 23 OP1 A B 575 -12.476 90.419 113.063 1.00 63.14 O
ATOM 24 OP2 A B 575 -14.264 88.842 112.089 1.00 62.42 O
ATOM 25 O5' A B 575 -11.912 88.063 112.346 1.00 60.23 O
TER
Atoms:
C2: (-10.329,95.297,120.689)
OP1: (-4.225,98.043,124.441)
OP2: (-4.448,95.904,123.006)
C4: (-8.649,93.723,120.307)
O5': (-6.343,97.530,123.225)
C3': (-9.118,97.645,124.127)
C1': (-9.838,97.420,121.896)
O4': (-8.726,98.305,121.914)
C5': (-6.949,98.816,123.458)
P: (-4.760,97.351,123.234)
O2: (-11.508,95.681,120.590)
C4': (-8.445,98.715,123.280)
C2': (-10.376,97.342,123.326)
O2': (-11.381,98.324,123.504)
N1: (-9.393,96.118,121.353)
N3: (-9.923,94.108,120.175)
N4: (-8.291,92.543,119.783)
C6: (-8.093,95.708,121.484)
C5: (-7.683,94.531,120.982)
O3': (-9.389,98.083,125.456)
OP1: (-4.225,98.043,124.441)
OP2: (-4.448,95.904,123.006)
C4: (-8.649,93.723,120.307)
O5': (-6.343,97.530,123.225)
C3': (-9.118,97.645,124.127)
C1': (-9.838,97.420,121.896)
O4': (-8.726,98.305,121.914)
C5': (-6.949,98.816,123.458)
P: (-4.760,97.351,123.234)
O2: (-11.508,95.681,120.590)
C4': (-8.445,98.715,123.280)
C2': (-10.376,97.342,123.326)
O2': (-11.381,98.324,123.504)
N1: (-9.393,96.118,121.353)
N3: (-9.923,94.108,120.175)
N4: (-8.291,92.543,119.783)
C6: (-8.093,95.708,121.484)
C5: (-7.683,94.531,120.982)
O3': (-9.389,98.083,125.456)
C2: (-9.345,89.986,117.993)
OP1: (-11.522,83.392,114.066)
OP2: (-9.137,84.182,114.609)
C4: (-7.257,89.081,117.476)
O5': (-11.126,85.521,115.326)
C3': (-12.306,88.237,115.294)
C1': (-11.436,88.740,117.434)
O4': (-11.815,87.366,117.403)
C5': (-12.477,85.715,115.760)
P: (-10.571,84.061,114.996)
O2: (-10.059,90.899,118.457)
C4': (-12.672,87.126,116.259)
C2': (-12.092,89.421,116.231)
O2': (-13.298,90.027,116.648)
N1: (-9.958,88.835,117.438)
N3: (-7.993,90.071,117.998)
N4: (-5.924,89.213,117.498)
C6: (-9.187,87.831,116.911)
C5: (-7.851,87.913,116.907)
O3': (-13.363,88.471,114.376)
OP1: (-11.522,83.392,114.066)
OP2: (-9.137,84.182,114.609)
C4: (-7.257,89.081,117.476)
O5': (-11.126,85.521,115.326)
C3': (-12.306,88.237,115.294)
C1': (-11.436,88.740,117.434)
O4': (-11.815,87.366,117.403)
C5': (-12.477,85.715,115.760)
P: (-10.571,84.061,114.996)
O2: (-10.059,90.899,118.457)
C4': (-12.672,87.126,116.259)
C2': (-12.092,89.421,116.231)
O2': (-13.298,90.027,116.648)
N1: (-9.958,88.835,117.438)
N3: (-7.993,90.071,117.998)
N4: (-5.924,89.213,117.498)
C6: (-9.187,87.831,116.911)
C5: (-7.851,87.913,116.907)
O3': (-13.363,88.471,114.376)
Image (generated by PyMOL):