Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1346:A1347
Extra
PDB:
ATOM 1 O3' U A1345 2.279 -62.015 -17.304 1.00 55.22 O
ATOM 2 P U A1346 3.184 -63.030 -16.489 1.00 65.64 P
ATOM 3 OP1 U A1346 2.367 -64.227 -16.156 1.00 64.18 O
ATOM 4 OP2 U A1346 3.864 -62.274 -15.405 1.00 60.14 O
ATOM 5 O5' U A1346 4.258 -63.426 -17.583 1.00 59.69 O
ATOM 6 C5' U A1346 3.846 -64.121 -18.746 1.00 52.78 C
ATOM 7 C4' U A1346 5.045 -64.490 -19.546 1.00 55.90 C
ATOM 8 O4' U A1346 5.588 -63.299 -20.158 1.00 54.51 O
ATOM 9 C3' U A1346 6.173 -65.023 -18.684 1.00 54.70 C
ATOM 10 O3' U A1346 6.022 -66.404 -18.426 1.00 51.01 O
ATOM 11 C2' U A1346 7.397 -64.719 -19.521 1.00 57.96 C
ATOM 12 O2' U A1346 7.565 -65.700 -20.524 1.00 60.48 O
ATOM 13 C1' U A1346 7.002 -63.385 -20.167 1.00 58.54 C
ATOM 14 N1 U A1346 7.549 -62.206 -19.485 1.00 55.18 N
ATOM 15 C2 U A1346 8.871 -61.867 -19.725 1.00 56.12 C
ATOM 16 O2 U A1346 9.622 -62.531 -20.430 1.00 54.13 O
ATOM 17 N3 U A1346 9.286 -60.721 -19.107 1.00 54.69 N
ATOM 18 C4 U A1346 8.539 -59.897 -18.289 1.00 57.65 C
ATOM 19 O4 U A1346 8.988 -58.785 -17.982 1.00 57.94 O
ATOM 20 C5 U A1346 7.204 -60.349 -18.057 1.00 57.11 C
ATOM 21 C6 U A1346 6.769 -61.456 -18.649 1.00 53.12 C
ATOM 22 P A A1347 6.435 -66.984 -16.990 1.00 58.88 P
ATOM 23 OP1 A A1347 6.218 -68.464 -16.975 1.00 44.01 O
ATOM 24 OP2 A A1347 5.785 -66.120 -15.959 1.00 50.74 O
ATOM 25 O5' A A1347 8.008 -66.754 -16.926 1.00 56.80 O
TER
ATOM 1 O3' U B1346 6.022 -66.404 -18.426 1.00 51.01 O
ATOM 2 P A B1347 6.435 -66.984 -16.990 1.00 58.88 P
ATOM 3 OP1 A B1347 6.218 -68.464 -16.975 1.00 44.01 O
ATOM 4 OP2 A B1347 5.785 -66.120 -15.959 1.00 50.74 O
ATOM 5 O5' A B1347 8.008 -66.754 -16.926 1.00 56.80 O
ATOM 6 C5' A B1347 8.720 -66.959 -15.709 1.00 53.26 C
ATOM 7 C4' A B1347 10.192 -67.077 -15.990 1.00 48.70 C
ATOM 8 O4' A B1347 10.455 -68.335 -16.651 1.00 55.29 O
ATOM 9 C3' A B1347 10.754 -65.999 -16.892 1.00 53.05 C
ATOM 10 O3' A B1347 11.137 -64.887 -16.074 1.00 51.33 O
ATOM 11 C2' A B1347 11.940 -66.709 -17.542 1.00 56.10 C
ATOM 12 O2' A B1347 13.066 -66.720 -16.689 1.00 60.08 O
ATOM 13 C1' A B1347 11.450 -68.158 -17.632 1.00 56.94 C
ATOM 14 N9 A B1347 10.883 -68.589 -18.916 1.00 60.88 N
ATOM 15 C8 A B1347 9.563 -68.521 -19.286 1.00 58.87 C
ATOM 16 N7 A B1347 9.309 -69.068 -20.452 1.00 60.33 N
ATOM 17 C5 A B1347 10.548 -69.507 -20.890 1.00 58.10 C
ATOM 18 C6 A B1347 10.948 -70.188 -22.052 1.00 50.73 C
ATOM 19 N6 A B1347 10.111 -70.586 -23.005 1.00 52.07 N
ATOM 20 N1 A B1347 12.258 -70.464 -22.197 1.00 44.96 N
ATOM 21 C2 A B1347 13.095 -70.088 -21.233 1.00 57.06 C
ATOM 22 N3 A B1347 12.841 -69.458 -20.088 1.00 62.55 N
ATOM 23 C4 A B1347 11.532 -69.193 -19.972 1.00 62.59 C
ATOM 24 P A B1348 10.914 -63.368 -16.574 1.00 52.36 P
ATOM 25 OP1 A B1348 11.362 -62.455 -15.484 1.00 33.48 O
ATOM 26 OP2 A B1348 9.543 -63.230 -17.142 1.00 58.01 O
ATOM 27 O5' A B1348 11.949 -63.230 -17.768 1.00 48.33 O
TER
ATOM 2 P U A1346 3.184 -63.030 -16.489 1.00 65.64 P
ATOM 3 OP1 U A1346 2.367 -64.227 -16.156 1.00 64.18 O
ATOM 4 OP2 U A1346 3.864 -62.274 -15.405 1.00 60.14 O
ATOM 5 O5' U A1346 4.258 -63.426 -17.583 1.00 59.69 O
ATOM 6 C5' U A1346 3.846 -64.121 -18.746 1.00 52.78 C
ATOM 7 C4' U A1346 5.045 -64.490 -19.546 1.00 55.90 C
ATOM 8 O4' U A1346 5.588 -63.299 -20.158 1.00 54.51 O
ATOM 9 C3' U A1346 6.173 -65.023 -18.684 1.00 54.70 C
ATOM 10 O3' U A1346 6.022 -66.404 -18.426 1.00 51.01 O
ATOM 11 C2' U A1346 7.397 -64.719 -19.521 1.00 57.96 C
ATOM 12 O2' U A1346 7.565 -65.700 -20.524 1.00 60.48 O
ATOM 13 C1' U A1346 7.002 -63.385 -20.167 1.00 58.54 C
ATOM 14 N1 U A1346 7.549 -62.206 -19.485 1.00 55.18 N
ATOM 15 C2 U A1346 8.871 -61.867 -19.725 1.00 56.12 C
ATOM 16 O2 U A1346 9.622 -62.531 -20.430 1.00 54.13 O
ATOM 17 N3 U A1346 9.286 -60.721 -19.107 1.00 54.69 N
ATOM 18 C4 U A1346 8.539 -59.897 -18.289 1.00 57.65 C
ATOM 19 O4 U A1346 8.988 -58.785 -17.982 1.00 57.94 O
ATOM 20 C5 U A1346 7.204 -60.349 -18.057 1.00 57.11 C
ATOM 21 C6 U A1346 6.769 -61.456 -18.649 1.00 53.12 C
ATOM 22 P A A1347 6.435 -66.984 -16.990 1.00 58.88 P
ATOM 23 OP1 A A1347 6.218 -68.464 -16.975 1.00 44.01 O
ATOM 24 OP2 A A1347 5.785 -66.120 -15.959 1.00 50.74 O
ATOM 25 O5' A A1347 8.008 -66.754 -16.926 1.00 56.80 O
TER
ATOM 1 O3' U B1346 6.022 -66.404 -18.426 1.00 51.01 O
ATOM 2 P A B1347 6.435 -66.984 -16.990 1.00 58.88 P
ATOM 3 OP1 A B1347 6.218 -68.464 -16.975 1.00 44.01 O
ATOM 4 OP2 A B1347 5.785 -66.120 -15.959 1.00 50.74 O
ATOM 5 O5' A B1347 8.008 -66.754 -16.926 1.00 56.80 O
ATOM 6 C5' A B1347 8.720 -66.959 -15.709 1.00 53.26 C
ATOM 7 C4' A B1347 10.192 -67.077 -15.990 1.00 48.70 C
ATOM 8 O4' A B1347 10.455 -68.335 -16.651 1.00 55.29 O
ATOM 9 C3' A B1347 10.754 -65.999 -16.892 1.00 53.05 C
ATOM 10 O3' A B1347 11.137 -64.887 -16.074 1.00 51.33 O
ATOM 11 C2' A B1347 11.940 -66.709 -17.542 1.00 56.10 C
ATOM 12 O2' A B1347 13.066 -66.720 -16.689 1.00 60.08 O
ATOM 13 C1' A B1347 11.450 -68.158 -17.632 1.00 56.94 C
ATOM 14 N9 A B1347 10.883 -68.589 -18.916 1.00 60.88 N
ATOM 15 C8 A B1347 9.563 -68.521 -19.286 1.00 58.87 C
ATOM 16 N7 A B1347 9.309 -69.068 -20.452 1.00 60.33 N
ATOM 17 C5 A B1347 10.548 -69.507 -20.890 1.00 58.10 C
ATOM 18 C6 A B1347 10.948 -70.188 -22.052 1.00 50.73 C
ATOM 19 N6 A B1347 10.111 -70.586 -23.005 1.00 52.07 N
ATOM 20 N1 A B1347 12.258 -70.464 -22.197 1.00 44.96 N
ATOM 21 C2 A B1347 13.095 -70.088 -21.233 1.00 57.06 C
ATOM 22 N3 A B1347 12.841 -69.458 -20.088 1.00 62.55 N
ATOM 23 C4 A B1347 11.532 -69.193 -19.972 1.00 62.59 C
ATOM 24 P A B1348 10.914 -63.368 -16.574 1.00 52.36 P
ATOM 25 OP1 A B1348 11.362 -62.455 -15.484 1.00 33.48 O
ATOM 26 OP2 A B1348 9.543 -63.230 -17.142 1.00 58.01 O
ATOM 27 O5' A B1348 11.949 -63.230 -17.768 1.00 48.33 O
TER
Atoms:
C4: (8.539,-59.897,-18.289)
N3: (9.286,-60.721,-19.107)
OP1: (2.367,-64.227,-16.156)
OP2: (3.864,-62.274,-15.405)
C2: (8.871,-61.867,-19.725)
C1': (7.002,-63.385,-20.167)
C3': (6.173,-65.023,-18.684)
O5': (4.258,-63.426,-17.583)
O4': (5.588,-63.299,-20.158)
C5': (3.846,-64.121,-18.746)
P: (3.184,-63.030,-16.489)
C4': (5.045,-64.490,-19.546)
C2': (7.397,-64.719,-19.521)
O2': (7.565,-65.700,-20.524)
N1: (7.549,-62.206,-19.485)
O4: (8.988,-58.785,-17.982)
O2: (9.622,-62.531,-20.430)
C6: (6.769,-61.456,-18.649)
C5: (7.204,-60.349,-18.057)
O3': (6.022,-66.404,-18.426)
N3: (9.286,-60.721,-19.107)
OP1: (2.367,-64.227,-16.156)
OP2: (3.864,-62.274,-15.405)
C2: (8.871,-61.867,-19.725)
C1': (7.002,-63.385,-20.167)
C3': (6.173,-65.023,-18.684)
O5': (4.258,-63.426,-17.583)
O4': (5.588,-63.299,-20.158)
C5': (3.846,-64.121,-18.746)
P: (3.184,-63.030,-16.489)
C4': (5.045,-64.490,-19.546)
C2': (7.397,-64.719,-19.521)
O2': (7.565,-65.700,-20.524)
N1: (7.549,-62.206,-19.485)
O4: (8.988,-58.785,-17.982)
O2: (9.622,-62.531,-20.430)
C6: (6.769,-61.456,-18.649)
C5: (7.204,-60.349,-18.057)
O3': (6.022,-66.404,-18.426)
OP1: (6.218,-68.464,-16.975)
OP2: (5.785,-66.120,-15.959)
C3': (10.754,-65.999,-16.892)
C1': (11.450,-68.158,-17.632)
C5': (8.720,-66.959,-15.709)
O4': (10.455,-68.335,-16.651)
C8: (9.563,-68.521,-19.286)
O2': (13.066,-66.720,-16.689)
C6: (10.948,-70.188,-22.052)
C5: (10.548,-69.507,-20.890)
C4: (11.532,-69.193,-19.972)
P: (6.435,-66.984,-16.990)
C4': (10.192,-67.077,-15.990)
C2': (11.940,-66.709,-17.542)
C2: (13.095,-70.088,-21.233)
N1: (12.258,-70.464,-22.197)
N3: (12.841,-69.458,-20.088)
N6: (10.111,-70.586,-23.005)
N7: (9.309,-69.068,-20.452)
N9: (10.883,-68.589,-18.916)
O5': (8.008,-66.754,-16.926)
O3': (11.137,-64.887,-16.074)
OP2: (5.785,-66.120,-15.959)
C3': (10.754,-65.999,-16.892)
C1': (11.450,-68.158,-17.632)
C5': (8.720,-66.959,-15.709)
O4': (10.455,-68.335,-16.651)
C8: (9.563,-68.521,-19.286)
O2': (13.066,-66.720,-16.689)
C6: (10.948,-70.188,-22.052)
C5: (10.548,-69.507,-20.890)
C4: (11.532,-69.193,-19.972)
P: (6.435,-66.984,-16.990)
C4': (10.192,-67.077,-15.990)
C2': (11.940,-66.709,-17.542)
C2: (13.095,-70.088,-21.233)
N1: (12.258,-70.464,-22.197)
N3: (12.841,-69.458,-20.088)
N6: (10.111,-70.586,-23.005)
N7: (9.309,-69.068,-20.452)
N9: (10.883,-68.589,-18.916)
O5': (8.008,-66.754,-16.926)
O3': (11.137,-64.887,-16.074)
Image (generated by PyMOL):