Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02078:02107
Extra
PDB:
ATOM 1 O3' G A2077 107.068 104.851 33.251 1.00 41.42 O
ATOM 2 P C A2078 108.468 105.271 32.570 1.00 42.21 P
ATOM 3 OP1 C A2078 108.274 105.123 31.100 1.00 41.74 O
ATOM 4 OP2 C A2078 109.575 104.545 33.244 1.00 39.71 O
ATOM 5 O5' C A2078 108.621 106.820 32.896 1.00 40.51 O
ATOM 6 C5' C A2078 107.666 107.770 32.402 1.00 40.70 C
ATOM 7 C4' C A2078 107.858 109.107 33.076 1.00 41.90 C
ATOM 8 O4' C A2078 107.585 109.000 34.498 1.00 40.42 O
ATOM 9 C3' C A2078 109.261 109.685 33.015 1.00 42.74 C
ATOM 10 O3' C A2078 109.472 110.298 31.750 1.00 46.50 O
ATOM 11 C2' C A2078 109.237 110.680 34.170 1.00 41.96 C
ATOM 12 O2' C A2078 108.540 111.867 33.844 1.00 42.49 O
ATOM 13 C1' C A2078 108.415 109.909 35.208 1.00 40.02 C
ATOM 14 N1 C A2078 109.228 109.147 36.177 1.00 37.94 N
ATOM 15 C2 C A2078 109.691 109.793 37.334 1.00 38.09 C
ATOM 16 O2 C A2078 109.430 110.995 37.501 1.00 41.23 O
ATOM 17 N3 C A2078 110.417 109.092 38.236 1.00 36.97 N
ATOM 18 C4 C A2078 110.697 107.805 38.012 1.00 36.16 C
ATOM 19 N4 C A2078 111.419 107.151 38.927 1.00 35.57 N
ATOM 20 C5 C A2078 110.252 107.129 36.840 1.00 34.92 C
ATOM 21 C6 C A2078 109.526 107.829 35.960 1.00 36.98 C
ATOM 22 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 23 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 24 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 25 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
TER
ATOM 1 O3' A B2106 112.891 113.168 47.445 1.00 46.07 O
ATOM 2 P C B2107 111.328 112.813 47.553 1.00 46.45 P
ATOM 3 OP1 C B2107 110.933 113.039 48.972 1.00 48.14 O
ATOM 4 OP2 C B2107 111.104 111.482 46.929 1.00 44.42 O
ATOM 5 O5' C B2107 110.618 113.927 46.666 1.00 43.38 O
ATOM 6 C5' C B2107 110.674 115.307 47.054 1.00 41.56 C
ATOM 7 C4' C B2107 110.119 116.184 45.960 1.00 39.85 C
ATOM 8 O4' C B2107 110.909 116.010 44.757 1.00 39.00 O
ATOM 9 C3' C B2107 108.705 115.859 45.518 1.00 39.28 C
ATOM 10 O3' C B2107 107.742 116.433 46.397 1.00 38.05 O
ATOM 11 C2' C B2107 108.666 116.469 44.125 1.00 38.71 C
ATOM 12 O2' C B2107 108.495 117.872 44.161 1.00 38.61 O
ATOM 13 C1' C B2107 110.074 116.139 43.618 1.00 38.40 C
ATOM 14 N1 C B2107 110.148 114.889 42.832 1.00 37.58 N
ATOM 15 C2 C B2107 109.709 114.904 41.505 1.00 38.92 C
ATOM 16 O2 C B2107 109.299 115.970 41.021 1.00 42.13 O
ATOM 17 N3 C B2107 109.744 113.760 40.781 1.00 38.44 N
ATOM 18 C4 C B2107 110.202 112.636 41.333 1.00 37.15 C
ATOM 19 N4 C B2107 110.205 111.528 40.586 1.00 37.04 N
ATOM 20 C5 C B2107 110.673 112.595 42.676 1.00 36.64 C
ATOM 21 C6 C B2107 110.626 113.732 43.384 1.00 37.04 C
ATOM 22 P C B2108 106.490 115.554 46.890 1.00 38.01 P
ATOM 23 OP1 C B2108 105.685 116.436 47.765 1.00 39.04 O
ATOM 24 OP2 C B2108 106.976 114.246 47.415 1.00 35.64 O
ATOM 25 O5' C B2108 105.656 115.296 45.558 1.00 34.06 O
TER
ATOM 2 P C A2078 108.468 105.271 32.570 1.00 42.21 P
ATOM 3 OP1 C A2078 108.274 105.123 31.100 1.00 41.74 O
ATOM 4 OP2 C A2078 109.575 104.545 33.244 1.00 39.71 O
ATOM 5 O5' C A2078 108.621 106.820 32.896 1.00 40.51 O
ATOM 6 C5' C A2078 107.666 107.770 32.402 1.00 40.70 C
ATOM 7 C4' C A2078 107.858 109.107 33.076 1.00 41.90 C
ATOM 8 O4' C A2078 107.585 109.000 34.498 1.00 40.42 O
ATOM 9 C3' C A2078 109.261 109.685 33.015 1.00 42.74 C
ATOM 10 O3' C A2078 109.472 110.298 31.750 1.00 46.50 O
ATOM 11 C2' C A2078 109.237 110.680 34.170 1.00 41.96 C
ATOM 12 O2' C A2078 108.540 111.867 33.844 1.00 42.49 O
ATOM 13 C1' C A2078 108.415 109.909 35.208 1.00 40.02 C
ATOM 14 N1 C A2078 109.228 109.147 36.177 1.00 37.94 N
ATOM 15 C2 C A2078 109.691 109.793 37.334 1.00 38.09 C
ATOM 16 O2 C A2078 109.430 110.995 37.501 1.00 41.23 O
ATOM 17 N3 C A2078 110.417 109.092 38.236 1.00 36.97 N
ATOM 18 C4 C A2078 110.697 107.805 38.012 1.00 36.16 C
ATOM 19 N4 C A2078 111.419 107.151 38.927 1.00 35.57 N
ATOM 20 C5 C A2078 110.252 107.129 36.840 1.00 34.92 C
ATOM 21 C6 C A2078 109.526 107.829 35.960 1.00 36.98 C
ATOM 22 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 23 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 24 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 25 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
TER
ATOM 1 O3' A B2106 112.891 113.168 47.445 1.00 46.07 O
ATOM 2 P C B2107 111.328 112.813 47.553 1.00 46.45 P
ATOM 3 OP1 C B2107 110.933 113.039 48.972 1.00 48.14 O
ATOM 4 OP2 C B2107 111.104 111.482 46.929 1.00 44.42 O
ATOM 5 O5' C B2107 110.618 113.927 46.666 1.00 43.38 O
ATOM 6 C5' C B2107 110.674 115.307 47.054 1.00 41.56 C
ATOM 7 C4' C B2107 110.119 116.184 45.960 1.00 39.85 C
ATOM 8 O4' C B2107 110.909 116.010 44.757 1.00 39.00 O
ATOM 9 C3' C B2107 108.705 115.859 45.518 1.00 39.28 C
ATOM 10 O3' C B2107 107.742 116.433 46.397 1.00 38.05 O
ATOM 11 C2' C B2107 108.666 116.469 44.125 1.00 38.71 C
ATOM 12 O2' C B2107 108.495 117.872 44.161 1.00 38.61 O
ATOM 13 C1' C B2107 110.074 116.139 43.618 1.00 38.40 C
ATOM 14 N1 C B2107 110.148 114.889 42.832 1.00 37.58 N
ATOM 15 C2 C B2107 109.709 114.904 41.505 1.00 38.92 C
ATOM 16 O2 C B2107 109.299 115.970 41.021 1.00 42.13 O
ATOM 17 N3 C B2107 109.744 113.760 40.781 1.00 38.44 N
ATOM 18 C4 C B2107 110.202 112.636 41.333 1.00 37.15 C
ATOM 19 N4 C B2107 110.205 111.528 40.586 1.00 37.04 N
ATOM 20 C5 C B2107 110.673 112.595 42.676 1.00 36.64 C
ATOM 21 C6 C B2107 110.626 113.732 43.384 1.00 37.04 C
ATOM 22 P C B2108 106.490 115.554 46.890 1.00 38.01 P
ATOM 23 OP1 C B2108 105.685 116.436 47.765 1.00 39.04 O
ATOM 24 OP2 C B2108 106.976 114.246 47.415 1.00 35.64 O
ATOM 25 O5' C B2108 105.656 115.296 45.558 1.00 34.06 O
TER
Atoms:
C2: (109.691,109.793,37.334)
OP1: (108.274,105.123,31.100)
OP2: (109.575,104.545,33.244)
C4: (110.697,107.805,38.012)
O5': (108.621,106.820,32.896)
C3': (109.261,109.685,33.015)
C1': (108.415,109.909,35.208)
O4': (107.585,109.000,34.498)
C5': (107.666,107.770,32.402)
P: (108.468,105.271,32.570)
O2: (109.430,110.995,37.501)
C4': (107.858,109.107,33.076)
C2': (109.237,110.680,34.170)
O2': (108.540,111.867,33.844)
N1: (109.228,109.147,36.177)
N3: (110.417,109.092,38.236)
N4: (111.419,107.151,38.927)
C6: (109.526,107.829,35.960)
C5: (110.252,107.129,36.840)
O3': (109.472,110.298,31.750)
OP1: (108.274,105.123,31.100)
OP2: (109.575,104.545,33.244)
C4: (110.697,107.805,38.012)
O5': (108.621,106.820,32.896)
C3': (109.261,109.685,33.015)
C1': (108.415,109.909,35.208)
O4': (107.585,109.000,34.498)
C5': (107.666,107.770,32.402)
P: (108.468,105.271,32.570)
O2: (109.430,110.995,37.501)
C4': (107.858,109.107,33.076)
C2': (109.237,110.680,34.170)
O2': (108.540,111.867,33.844)
N1: (109.228,109.147,36.177)
N3: (110.417,109.092,38.236)
N4: (111.419,107.151,38.927)
C6: (109.526,107.829,35.960)
C5: (110.252,107.129,36.840)
O3': (109.472,110.298,31.750)
C2: (109.709,114.904,41.505)
OP1: (110.933,113.039,48.972)
OP2: (111.104,111.482,46.929)
C4: (110.202,112.636,41.333)
O5': (110.618,113.927,46.666)
C3': (108.705,115.859,45.518)
C1': (110.074,116.139,43.618)
O4': (110.909,116.010,44.757)
C5': (110.674,115.307,47.054)
P: (111.328,112.813,47.553)
O2: (109.299,115.970,41.021)
C4': (110.119,116.184,45.960)
C2': (108.666,116.469,44.125)
O2': (108.495,117.872,44.161)
N1: (110.148,114.889,42.832)
N3: (109.744,113.760,40.781)
N4: (110.205,111.528,40.586)
C6: (110.626,113.732,43.384)
C5: (110.673,112.595,42.676)
O3': (107.742,116.433,46.397)
OP1: (110.933,113.039,48.972)
OP2: (111.104,111.482,46.929)
C4: (110.202,112.636,41.333)
O5': (110.618,113.927,46.666)
C3': (108.705,115.859,45.518)
C1': (110.074,116.139,43.618)
O4': (110.909,116.010,44.757)
C5': (110.674,115.307,47.054)
P: (111.328,112.813,47.553)
O2: (109.299,115.970,41.021)
C4': (110.119,116.184,45.960)
C2': (108.666,116.469,44.125)
O2': (108.495,117.872,44.161)
N1: (110.148,114.889,42.832)
N3: (109.744,113.760,40.781)
N4: (110.205,111.528,40.586)
C6: (110.626,113.732,43.384)
C5: (110.673,112.595,42.676)
O3': (107.742,116.433,46.397)
Image (generated by PyMOL):