ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01061:01206

Extra

PDB:
ATOM 1 O3' U A1060 18.565 105.592 124.251 1.00 49.42 O
ATOM 2 P C A1061 19.129 105.347 125.731 1.00 49.41 P
ATOM 3 OP1 C A1061 20.573 105.033 125.642 1.00 49.94 O
ATOM 4 OP2 C A1061 18.213 104.380 126.378 1.00 48.61 O
ATOM 5 O5' C A1061 19.027 106.772 126.431 1.00 45.03 O
ATOM 6 C5' C A1061 17.779 107.280 126.896 1.00 43.61 C
ATOM 7 C4' C A1061 17.927 108.729 127.254 1.00 42.03 C
ATOM 8 O4' C A1061 19.034 108.838 128.173 1.00 43.55 O
ATOM 9 C3' C A1061 18.318 109.641 126.106 1.00 43.29 C
ATOM 10 O3' C A1061 17.178 110.042 125.368 1.00 46.18 O
ATOM 11 C2' C A1061 19.009 110.792 126.821 1.00 43.23 C
ATOM 12 O2' C A1061 18.122 111.706 127.428 1.00 43.39 O
ATOM 13 C1' C A1061 19.750 110.040 127.926 1.00 43.16 C
ATOM 14 N1 C A1061 21.151 109.700 127.599 1.00 41.16 N
ATOM 15 C2 C A1061 22.097 110.717 127.595 1.00 41.06 C
ATOM 16 O2 C A1061 21.733 111.866 127.855 1.00 42.69 O
ATOM 17 N3 C A1061 23.385 110.426 127.317 1.00 40.98 N
ATOM 18 C4 C A1061 23.743 109.169 127.076 1.00 39.45 C
ATOM 19 N4 C A1061 25.025 108.924 126.858 1.00 38.28 N
ATOM 20 C5 C A1061 22.799 108.108 127.061 1.00 39.51 C
ATOM 21 C6 C A1061 21.524 108.415 127.317 1.00 40.09 C
ATOM 22 P C A1062 17.335 110.479 123.837 1.00 47.65 P
ATOM 23 OP1 C A1062 15.985 110.754 123.300 1.00 50.06 O
ATOM 24 OP2 C A1062 18.202 109.494 123.152 1.00 47.56 O
ATOM 25 O5' C A1062 18.076 111.877 123.951 1.00 47.45 O
TER

ATOM 1 O3' A B1205 22.458 104.593 133.793 1.00 51.21 O
ATOM 2 P A B1206 21.046 104.708 133.039 1.00 51.03 P
ATOM 3 OP1 A B1206 20.346 105.851 133.703 1.00 50.38 O
ATOM 4 OP2 A B1206 20.380 103.371 132.982 1.00 46.92 O
ATOM 5 O5' A B1206 21.466 105.153 131.560 1.00 47.47 O
ATOM 6 C5' A B1206 21.961 104.194 130.593 1.00 44.21 C
ATOM 7 C4' A B1206 23.284 104.651 130.017 1.00 42.35 C
ATOM 8 O4' A B1206 23.151 106.026 129.557 1.00 42.35 O
ATOM 9 C3' A B1206 24.466 104.647 130.980 1.00 42.34 C
ATOM 10 O3' A B1206 25.676 104.460 130.245 1.00 44.26 O
ATOM 11 C2' A B1206 24.455 106.077 131.501 1.00 42.63 C
ATOM 12 O2' A B1206 25.705 106.502 132.007 1.00 41.45 O
ATOM 13 C1' A B1206 24.078 106.848 130.234 1.00 42.31 C
ATOM 14 N9 A B1206 23.448 108.141 130.501 1.00 43.29 N
ATOM 15 C8 A B1206 22.175 108.382 130.952 1.00 44.39 C
ATOM 16 N7 A B1206 21.915 109.650 131.148 1.00 45.03 N
ATOM 17 C5 A B1206 23.091 110.291 130.791 1.00 46.10 C
ATOM 18 C6 A B1206 23.468 111.651 130.777 1.00 47.08 C
ATOM 19 N6 A B1206 22.678 112.650 131.186 1.00 47.51 N
ATOM 20 N1 A B1206 24.706 111.952 130.335 1.00 46.29 N
ATOM 21 C2 A B1206 25.511 110.957 129.961 1.00 47.13 C
ATOM 22 N3 A B1206 25.282 109.646 129.949 1.00 48.74 N
ATOM 23 C4 A B1206 24.038 109.375 130.376 1.00 45.47 C
ATOM 24 P A B1207 26.073 103.008 129.685 1.00 45.50 P
ATOM 25 OP1 A B1207 26.435 103.214 128.260 1.00 45.29 O
ATOM 26 OP2 A B1207 25.017 102.028 130.037 1.00 46.37 O
ATOM 27 O5' A B1207 27.399 102.630 130.481 1.00 45.93 O
TER

Atoms:
C2: (22.097,110.717,127.595)
OP1: (20.573,105.033,125.642)
OP2: (18.213,104.380,126.378)
C4: (23.743,109.169,127.076)
O5': (19.027,106.772,126.431)
C3': (18.318,109.641,126.106)
C1': (19.750,110.040,127.926)
O4': (19.034,108.838,128.173)
C5': (17.779,107.280,126.896)
P: (19.129,105.347,125.731)
O2: (21.733,111.866,127.855)
C4': (17.927,108.729,127.254)
C2': (19.009,110.792,126.821)
O2': (18.122,111.706,127.428)
N1: (21.151,109.700,127.599)
N3: (23.385,110.426,127.317)
N4: (25.025,108.924,126.858)
C6: (21.524,108.415,127.317)
C5: (22.799,108.108,127.061)
O3': (17.178,110.042,125.368)
OP1: (20.346,105.851,133.703)
OP2: (20.380,103.371,132.982)
C3': (24.466,104.647,130.980)
C1': (24.078,106.848,130.234)
C5': (21.961,104.194,130.593)
O4': (23.151,106.026,129.557)
C8: (22.175,108.382,130.952)
O2': (25.705,106.502,132.007)
C6: (23.468,111.651,130.777)
C5: (23.091,110.291,130.791)
C4: (24.038,109.375,130.376)
P: (21.046,104.708,133.039)
C4': (23.284,104.651,130.017)
C2': (24.455,106.077,131.501)
C2: (25.511,110.957,129.961)
N1: (24.706,111.952,130.335)
N3: (25.282,109.646,129.949)
N6: (22.678,112.650,131.186)
N7: (21.915,109.650,131.148)
N9: (23.448,108.141,130.501)
O5': (21.466,105.153,131.560)
O3': (25.676,104.460,130.245)
Image (generated by PyMOL):
PyMOL image
show in jmol