Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CXC:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -3.809 99.850 122.195 1.00 92.51 O
ATOM 2 P C A 559 -4.215 98.922 123.443 1.00 94.65 P
ATOM 3 OP1 C A 559 -3.534 99.492 124.636 1.00 94.34 O
ATOM 4 OP2 C A 559 -4.008 97.493 123.087 1.00 94.06 O
ATOM 5 O5' C A 559 -5.779 99.164 123.616 1.00 95.27 O
ATOM 6 C5' C A 559 -6.292 100.477 123.944 1.00 96.34 C
ATOM 7 C4' C A 559 -7.800 100.505 123.818 1.00 95.14 C
ATOM 8 O4' C A 559 -8.158 100.209 122.445 1.00 94.36 O
ATOM 9 C3' C A 559 -8.537 99.460 124.641 1.00 94.66 C
ATOM 10 O3' C A 559 -8.789 99.894 125.966 1.00 94.40 O
ATOM 11 C2' C A 559 -9.819 99.253 123.852 1.00 94.10 C
ATOM 12 O2' C A 559 -10.782 100.254 124.113 1.00 93.56 O
ATOM 13 C1' C A 559 -9.315 99.394 122.416 1.00 93.08 C
ATOM 14 N1 C A 559 -8.940 98.091 121.842 1.00 90.96 N
ATOM 15 C2 C A 559 -9.952 97.236 121.394 1.00 90.04 C
ATOM 16 O2 C A 559 -11.136 97.609 121.470 1.00 89.48 O
ATOM 17 N3 C A 559 -9.618 96.027 120.890 1.00 89.81 N
ATOM 18 C4 C A 559 -8.335 95.663 120.821 1.00 88.27 C
ATOM 19 N4 C A 559 -8.054 94.460 120.323 1.00 87.84 N
ATOM 20 C5 C A 559 -7.283 96.519 121.261 1.00 88.97 C
ATOM 21 C6 C A 559 -7.626 97.711 121.758 1.00 89.39 C
ATOM 22 P G A 560 -8.651 98.848 127.174 1.00 94.84 P
ATOM 23 OP1 G A 560 -9.060 99.558 128.405 1.00 94.60 O
ATOM 24 OP2 G A 560 -7.307 98.218 127.097 1.00 94.83 O
ATOM 25 O5' G A 560 -9.730 97.726 126.841 1.00 96.51 O
TER
ATOM 1 O3' C B 573 -10.616 85.085 116.833 1.00 84.85 O
ATOM 2 P C B 574 -10.701 85.886 115.444 1.00 84.02 P
ATOM 3 OP1 C B 574 -11.803 85.282 114.668 1.00 83.19 O
ATOM 4 OP2 C B 574 -9.352 85.958 114.847 1.00 85.12 O
ATOM 5 O5' C B 574 -11.165 87.346 115.866 1.00 82.46 O
ATOM 6 C5' C B 574 -12.495 87.565 116.323 1.00 83.07 C
ATOM 7 C4' C B 574 -12.639 88.957 116.852 1.00 84.91 C
ATOM 8 O4' C B 574 -11.761 89.141 117.991 1.00 86.14 O
ATOM 9 C3' C B 574 -12.252 90.060 115.886 1.00 86.16 C
ATOM 10 O3' C B 574 -13.331 90.363 115.011 1.00 87.13 O
ATOM 11 C2' C B 574 -11.913 91.216 116.824 1.00 86.56 C
ATOM 12 O2' C B 574 -13.065 91.917 117.244 1.00 84.59 O
ATOM 13 C1' C B 574 -11.291 90.483 118.020 1.00 87.38 C
ATOM 14 N1 C B 574 -9.808 90.473 118.015 1.00 89.48 N
ATOM 15 C2 C B 574 -9.112 91.548 118.605 1.00 89.67 C
ATOM 16 O2 C B 574 -9.750 92.479 119.118 1.00 89.55 O
ATOM 17 N3 C B 574 -7.759 91.539 118.598 1.00 90.36 N
ATOM 18 C4 C B 574 -7.099 90.522 118.036 1.00 91.67 C
ATOM 19 N4 C B 574 -5.762 90.554 118.057 1.00 92.27 N
ATOM 20 C5 C B 574 -7.777 89.422 117.428 1.00 90.96 C
ATOM 21 C6 C B 574 -9.115 89.438 117.441 1.00 90.72 C
ATOM 22 P A B 575 -13.034 90.893 113.523 1.00 87.26 P
ATOM 23 OP1 A B 575 -12.420 92.241 113.649 1.00 86.25 O
ATOM 24 OP2 A B 575 -14.282 90.736 112.744 1.00 88.82 O
ATOM 25 O5' A B 575 -11.966 89.869 112.932 1.00 85.81 O
TER
ATOM 2 P C A 559 -4.215 98.922 123.443 1.00 94.65 P
ATOM 3 OP1 C A 559 -3.534 99.492 124.636 1.00 94.34 O
ATOM 4 OP2 C A 559 -4.008 97.493 123.087 1.00 94.06 O
ATOM 5 O5' C A 559 -5.779 99.164 123.616 1.00 95.27 O
ATOM 6 C5' C A 559 -6.292 100.477 123.944 1.00 96.34 C
ATOM 7 C4' C A 559 -7.800 100.505 123.818 1.00 95.14 C
ATOM 8 O4' C A 559 -8.158 100.209 122.445 1.00 94.36 O
ATOM 9 C3' C A 559 -8.537 99.460 124.641 1.00 94.66 C
ATOM 10 O3' C A 559 -8.789 99.894 125.966 1.00 94.40 O
ATOM 11 C2' C A 559 -9.819 99.253 123.852 1.00 94.10 C
ATOM 12 O2' C A 559 -10.782 100.254 124.113 1.00 93.56 O
ATOM 13 C1' C A 559 -9.315 99.394 122.416 1.00 93.08 C
ATOM 14 N1 C A 559 -8.940 98.091 121.842 1.00 90.96 N
ATOM 15 C2 C A 559 -9.952 97.236 121.394 1.00 90.04 C
ATOM 16 O2 C A 559 -11.136 97.609 121.470 1.00 89.48 O
ATOM 17 N3 C A 559 -9.618 96.027 120.890 1.00 89.81 N
ATOM 18 C4 C A 559 -8.335 95.663 120.821 1.00 88.27 C
ATOM 19 N4 C A 559 -8.054 94.460 120.323 1.00 87.84 N
ATOM 20 C5 C A 559 -7.283 96.519 121.261 1.00 88.97 C
ATOM 21 C6 C A 559 -7.626 97.711 121.758 1.00 89.39 C
ATOM 22 P G A 560 -8.651 98.848 127.174 1.00 94.84 P
ATOM 23 OP1 G A 560 -9.060 99.558 128.405 1.00 94.60 O
ATOM 24 OP2 G A 560 -7.307 98.218 127.097 1.00 94.83 O
ATOM 25 O5' G A 560 -9.730 97.726 126.841 1.00 96.51 O
TER
ATOM 1 O3' C B 573 -10.616 85.085 116.833 1.00 84.85 O
ATOM 2 P C B 574 -10.701 85.886 115.444 1.00 84.02 P
ATOM 3 OP1 C B 574 -11.803 85.282 114.668 1.00 83.19 O
ATOM 4 OP2 C B 574 -9.352 85.958 114.847 1.00 85.12 O
ATOM 5 O5' C B 574 -11.165 87.346 115.866 1.00 82.46 O
ATOM 6 C5' C B 574 -12.495 87.565 116.323 1.00 83.07 C
ATOM 7 C4' C B 574 -12.639 88.957 116.852 1.00 84.91 C
ATOM 8 O4' C B 574 -11.761 89.141 117.991 1.00 86.14 O
ATOM 9 C3' C B 574 -12.252 90.060 115.886 1.00 86.16 C
ATOM 10 O3' C B 574 -13.331 90.363 115.011 1.00 87.13 O
ATOM 11 C2' C B 574 -11.913 91.216 116.824 1.00 86.56 C
ATOM 12 O2' C B 574 -13.065 91.917 117.244 1.00 84.59 O
ATOM 13 C1' C B 574 -11.291 90.483 118.020 1.00 87.38 C
ATOM 14 N1 C B 574 -9.808 90.473 118.015 1.00 89.48 N
ATOM 15 C2 C B 574 -9.112 91.548 118.605 1.00 89.67 C
ATOM 16 O2 C B 574 -9.750 92.479 119.118 1.00 89.55 O
ATOM 17 N3 C B 574 -7.759 91.539 118.598 1.00 90.36 N
ATOM 18 C4 C B 574 -7.099 90.522 118.036 1.00 91.67 C
ATOM 19 N4 C B 574 -5.762 90.554 118.057 1.00 92.27 N
ATOM 20 C5 C B 574 -7.777 89.422 117.428 1.00 90.96 C
ATOM 21 C6 C B 574 -9.115 89.438 117.441 1.00 90.72 C
ATOM 22 P A B 575 -13.034 90.893 113.523 1.00 87.26 P
ATOM 23 OP1 A B 575 -12.420 92.241 113.649 1.00 86.25 O
ATOM 24 OP2 A B 575 -14.282 90.736 112.744 1.00 88.82 O
ATOM 25 O5' A B 575 -11.966 89.869 112.932 1.00 85.81 O
TER
Atoms:
C2: (-9.952,97.236,121.394)
OP1: (-3.534,99.492,124.636)
OP2: (-4.008,97.493,123.087)
C4: (-8.335,95.663,120.821)
O5': (-5.779,99.164,123.616)
C3': (-8.537,99.460,124.641)
C1': (-9.315,99.394,122.416)
O4': (-8.158,100.209,122.445)
C5': (-6.292,100.477,123.944)
P: (-4.215,98.922,123.443)
O2: (-11.136,97.609,121.470)
C4': (-7.800,100.505,123.818)
C2': (-9.819,99.253,123.852)
O2': (-10.782,100.254,124.113)
N1: (-8.940,98.091,121.842)
N3: (-9.618,96.027,120.890)
N4: (-8.054,94.460,120.323)
C6: (-7.626,97.711,121.758)
C5: (-7.283,96.519,121.261)
O3': (-8.789,99.894,125.966)
OP1: (-3.534,99.492,124.636)
OP2: (-4.008,97.493,123.087)
C4: (-8.335,95.663,120.821)
O5': (-5.779,99.164,123.616)
C3': (-8.537,99.460,124.641)
C1': (-9.315,99.394,122.416)
O4': (-8.158,100.209,122.445)
C5': (-6.292,100.477,123.944)
P: (-4.215,98.922,123.443)
O2: (-11.136,97.609,121.470)
C4': (-7.800,100.505,123.818)
C2': (-9.819,99.253,123.852)
O2': (-10.782,100.254,124.113)
N1: (-8.940,98.091,121.842)
N3: (-9.618,96.027,120.890)
N4: (-8.054,94.460,120.323)
C6: (-7.626,97.711,121.758)
C5: (-7.283,96.519,121.261)
O3': (-8.789,99.894,125.966)
C2: (-9.112,91.548,118.605)
OP1: (-11.803,85.282,114.668)
OP2: (-9.352,85.958,114.847)
C4: (-7.099,90.522,118.036)
O5': (-11.165,87.346,115.866)
C3': (-12.252,90.060,115.886)
C1': (-11.291,90.483,118.020)
O4': (-11.761,89.141,117.991)
C5': (-12.495,87.565,116.323)
P: (-10.701,85.886,115.444)
O2: (-9.750,92.479,119.118)
C4': (-12.639,88.957,116.852)
C2': (-11.913,91.216,116.824)
O2': (-13.065,91.917,117.244)
N1: (-9.808,90.473,118.015)
N3: (-7.759,91.539,118.598)
N4: (-5.762,90.554,118.057)
C6: (-9.115,89.438,117.441)
C5: (-7.777,89.422,117.428)
O3': (-13.331,90.363,115.011)
OP1: (-11.803,85.282,114.668)
OP2: (-9.352,85.958,114.847)
C4: (-7.099,90.522,118.036)
O5': (-11.165,87.346,115.866)
C3': (-12.252,90.060,115.886)
C1': (-11.291,90.483,118.020)
O4': (-11.761,89.141,117.991)
C5': (-12.495,87.565,116.323)
P: (-10.701,85.886,115.444)
O2: (-9.750,92.479,119.118)
C4': (-12.639,88.957,116.852)
C2': (-11.913,91.216,116.824)
O2': (-13.065,91.917,117.244)
N1: (-9.808,90.473,118.015)
N3: (-7.759,91.539,118.598)
N4: (-5.762,90.554,118.057)
C6: (-9.115,89.438,117.441)
C5: (-7.777,89.422,117.428)
O3': (-13.331,90.363,115.011)
Image (generated by PyMOL):