Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1384:A1385
Extra
PDB:
ATOM 1 O3' U A1383 3.885 -57.013 17.360 1.00 0.01 O
ATOM 2 P U A1384 3.016 -57.990 16.478 1.00 3.35 P
ATOM 3 OP1 U A1384 3.863 -59.148 16.105 1.00 3.35 O
ATOM 4 OP2 U A1384 2.410 -57.166 15.401 1.00 3.35 O
ATOM 5 O5' U A1384 1.919 -58.440 17.501 1.00 3.35 O
ATOM 6 C5' U A1384 2.291 -59.036 18.716 1.00 3.35 C
ATOM 7 C4' U A1384 1.109 -59.648 19.383 1.00 3.35 C
ATOM 8 O4' U A1384 0.333 -58.618 20.015 1.00 3.35 O
ATOM 9 C3' U A1384 0.138 -60.343 18.469 1.00 3.35 C
ATOM 10 O3' U A1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 11 C2' U A1384 -1.159 -60.244 19.238 1.00 3.35 C
ATOM 12 O2' U A1384 -1.185 -61.198 20.287 1.00 3.35 O
ATOM 13 C1' U A1384 -1.028 -58.887 19.873 1.00 3.35 C
ATOM 14 N1 U A1384 -1.596 -57.836 19.076 1.00 3.69 N
ATOM 15 C2 U A1384 -2.899 -57.560 19.271 1.00 3.69 C
ATOM 16 O2 U A1384 -3.604 -58.225 20.013 1.00 3.69 O
ATOM 17 N3 U A1384 -3.323 -56.498 18.543 1.00 3.69 N
ATOM 18 C4 U A1384 -2.571 -55.703 17.716 1.00 3.69 C
ATOM 19 O4 U A1384 -3.106 -54.771 17.108 1.00 3.69 O
ATOM 20 C5 U A1384 -1.203 -56.045 17.617 1.00 3.69 C
ATOM 21 C6 U A1384 -0.779 -57.080 18.310 1.00 3.69 C
ATOM 22 P A A1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 23 OP1 A A1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 24 OP2 A A1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 25 O5' A A1385 -1.030 -62.135 16.312 1.00 4.52 O
TER
ATOM 1 O3' U B1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 2 P A B1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 3 OP1 A B1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 4 OP2 A B1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 5 O5' A B1385 -1.030 -62.135 16.312 1.00 4.52 O
ATOM 6 C5' A B1385 -1.598 -62.959 15.295 1.00 4.52 C
ATOM 7 C4' A B1385 -3.072 -63.217 15.533 1.00 4.52 C
ATOM 8 O4' A B1385 -3.247 -64.451 16.242 1.00 4.52 O
ATOM 9 C3' A B1385 -3.807 -62.166 16.358 1.00 4.52 C
ATOM 10 O3' A B1385 -4.327 -61.157 15.533 1.00 4.52 O
ATOM 11 C2' A B1385 -4.892 -62.946 17.075 1.00 4.52 C
ATOM 12 O2' A B1385 -6.066 -62.991 16.291 1.00 4.52 O
ATOM 13 C1' A B1385 -4.310 -64.351 17.150 1.00 4.52 C
ATOM 14 N9 A B1385 -3.797 -64.689 18.474 1.00 4.50 N
ATOM 15 C8 A B1385 -2.553 -64.395 18.948 1.00 4.50 C
ATOM 16 N7 A B1385 -2.336 -64.854 20.154 1.00 4.50 N
ATOM 17 C5 A B1385 -3.501 -65.511 20.441 1.00 4.50 C
ATOM 18 C6 A B1385 -3.865 -66.205 21.563 1.00 4.50 C
ATOM 19 N6 A B1385 -3.027 -66.314 22.569 1.00 4.50 N
ATOM 20 N1 A B1385 -5.094 -66.758 21.613 1.00 4.50 N
ATOM 21 C2 A B1385 -5.884 -66.581 20.560 1.00 4.50 C
ATOM 22 N3 A B1385 -5.644 -65.943 19.423 1.00 4.50 N
ATOM 23 C4 A B1385 -4.413 -65.435 19.428 1.00 4.50 C
ATOM 24 P A B1386 -4.316 -59.637 15.983 1.00 0.01 P
ATOM 25 OP1 A B1386 -4.782 -58.845 14.803 1.00 0.01 O
ATOM 26 OP2 A B1386 -2.984 -59.353 16.581 1.00 0.01 O
ATOM 27 O5' A B1386 -5.421 -59.616 17.108 1.00 0.01 O
TER
ATOM 2 P U A1384 3.016 -57.990 16.478 1.00 3.35 P
ATOM 3 OP1 U A1384 3.863 -59.148 16.105 1.00 3.35 O
ATOM 4 OP2 U A1384 2.410 -57.166 15.401 1.00 3.35 O
ATOM 5 O5' U A1384 1.919 -58.440 17.501 1.00 3.35 O
ATOM 6 C5' U A1384 2.291 -59.036 18.716 1.00 3.35 C
ATOM 7 C4' U A1384 1.109 -59.648 19.383 1.00 3.35 C
ATOM 8 O4' U A1384 0.333 -58.618 20.015 1.00 3.35 O
ATOM 9 C3' U A1384 0.138 -60.343 18.469 1.00 3.35 C
ATOM 10 O3' U A1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 11 C2' U A1384 -1.159 -60.244 19.238 1.00 3.35 C
ATOM 12 O2' U A1384 -1.185 -61.198 20.287 1.00 3.35 O
ATOM 13 C1' U A1384 -1.028 -58.887 19.873 1.00 3.35 C
ATOM 14 N1 U A1384 -1.596 -57.836 19.076 1.00 3.69 N
ATOM 15 C2 U A1384 -2.899 -57.560 19.271 1.00 3.69 C
ATOM 16 O2 U A1384 -3.604 -58.225 20.013 1.00 3.69 O
ATOM 17 N3 U A1384 -3.323 -56.498 18.543 1.00 3.69 N
ATOM 18 C4 U A1384 -2.571 -55.703 17.716 1.00 3.69 C
ATOM 19 O4 U A1384 -3.106 -54.771 17.108 1.00 3.69 O
ATOM 20 C5 U A1384 -1.203 -56.045 17.617 1.00 3.69 C
ATOM 21 C6 U A1384 -0.779 -57.080 18.310 1.00 3.69 C
ATOM 22 P A A1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 23 OP1 A A1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 24 OP2 A A1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 25 O5' A A1385 -1.030 -62.135 16.312 1.00 4.52 O
TER
ATOM 1 O3' U B1384 0.528 -61.667 18.215 1.00 3.35 O
ATOM 2 P A B1385 0.516 -62.251 16.725 1.00 4.52 P
ATOM 3 OP1 A B1385 0.916 -63.681 16.843 1.00 4.52 O
ATOM 4 OP2 A B1385 1.345 -61.326 15.867 1.00 4.52 O
ATOM 5 O5' A B1385 -1.030 -62.135 16.312 1.00 4.52 O
ATOM 6 C5' A B1385 -1.598 -62.959 15.295 1.00 4.52 C
ATOM 7 C4' A B1385 -3.072 -63.217 15.533 1.00 4.52 C
ATOM 8 O4' A B1385 -3.247 -64.451 16.242 1.00 4.52 O
ATOM 9 C3' A B1385 -3.807 -62.166 16.358 1.00 4.52 C
ATOM 10 O3' A B1385 -4.327 -61.157 15.533 1.00 4.52 O
ATOM 11 C2' A B1385 -4.892 -62.946 17.075 1.00 4.52 C
ATOM 12 O2' A B1385 -6.066 -62.991 16.291 1.00 4.52 O
ATOM 13 C1' A B1385 -4.310 -64.351 17.150 1.00 4.52 C
ATOM 14 N9 A B1385 -3.797 -64.689 18.474 1.00 4.50 N
ATOM 15 C8 A B1385 -2.553 -64.395 18.948 1.00 4.50 C
ATOM 16 N7 A B1385 -2.336 -64.854 20.154 1.00 4.50 N
ATOM 17 C5 A B1385 -3.501 -65.511 20.441 1.00 4.50 C
ATOM 18 C6 A B1385 -3.865 -66.205 21.563 1.00 4.50 C
ATOM 19 N6 A B1385 -3.027 -66.314 22.569 1.00 4.50 N
ATOM 20 N1 A B1385 -5.094 -66.758 21.613 1.00 4.50 N
ATOM 21 C2 A B1385 -5.884 -66.581 20.560 1.00 4.50 C
ATOM 22 N3 A B1385 -5.644 -65.943 19.423 1.00 4.50 N
ATOM 23 C4 A B1385 -4.413 -65.435 19.428 1.00 4.50 C
ATOM 24 P A B1386 -4.316 -59.637 15.983 1.00 0.01 P
ATOM 25 OP1 A B1386 -4.782 -58.845 14.803 1.00 0.01 O
ATOM 26 OP2 A B1386 -2.984 -59.353 16.581 1.00 0.01 O
ATOM 27 O5' A B1386 -5.421 -59.616 17.108 1.00 0.01 O
TER
Atoms:
C4: (-2.571,-55.703,17.716)
N3: (-3.323,-56.498,18.543)
OP1: (3.863,-59.148,16.105)
OP2: (2.410,-57.166,15.401)
C2: (-2.899,-57.560,19.271)
C1': (-1.028,-58.887,19.873)
C3': (0.138,-60.343,18.469)
O5': (1.919,-58.440,17.501)
O4': (0.333,-58.618,20.015)
C5': (2.291,-59.036,18.716)
P: (3.016,-57.990,16.478)
C4': (1.109,-59.648,19.383)
C2': (-1.159,-60.244,19.238)
O2': (-1.185,-61.198,20.287)
N1: (-1.596,-57.836,19.076)
O4: (-3.106,-54.771,17.108)
O2: (-3.604,-58.225,20.013)
C6: (-0.779,-57.080,18.310)
C5: (-1.203,-56.045,17.617)
O3': (0.528,-61.667,18.215)
N3: (-3.323,-56.498,18.543)
OP1: (3.863,-59.148,16.105)
OP2: (2.410,-57.166,15.401)
C2: (-2.899,-57.560,19.271)
C1': (-1.028,-58.887,19.873)
C3': (0.138,-60.343,18.469)
O5': (1.919,-58.440,17.501)
O4': (0.333,-58.618,20.015)
C5': (2.291,-59.036,18.716)
P: (3.016,-57.990,16.478)
C4': (1.109,-59.648,19.383)
C2': (-1.159,-60.244,19.238)
O2': (-1.185,-61.198,20.287)
N1: (-1.596,-57.836,19.076)
O4: (-3.106,-54.771,17.108)
O2: (-3.604,-58.225,20.013)
C6: (-0.779,-57.080,18.310)
C5: (-1.203,-56.045,17.617)
O3': (0.528,-61.667,18.215)
OP1: (0.916,-63.681,16.843)
OP2: (1.345,-61.326,15.867)
C3': (-3.807,-62.166,16.358)
C1': (-4.310,-64.351,17.150)
C5': (-1.598,-62.959,15.295)
O4': (-3.247,-64.451,16.242)
C8: (-2.553,-64.395,18.948)
O2': (-6.066,-62.991,16.291)
C6: (-3.865,-66.205,21.563)
C5: (-3.501,-65.511,20.441)
C4: (-4.413,-65.435,19.428)
P: (0.516,-62.251,16.725)
C4': (-3.072,-63.217,15.533)
C2': (-4.892,-62.946,17.075)
C2: (-5.884,-66.581,20.560)
N1: (-5.094,-66.758,21.613)
N3: (-5.644,-65.943,19.423)
N6: (-3.027,-66.314,22.569)
N7: (-2.336,-64.854,20.154)
N9: (-3.797,-64.689,18.474)
O5': (-1.030,-62.135,16.312)
O3': (-4.327,-61.157,15.533)
OP2: (1.345,-61.326,15.867)
C3': (-3.807,-62.166,16.358)
C1': (-4.310,-64.351,17.150)
C5': (-1.598,-62.959,15.295)
O4': (-3.247,-64.451,16.242)
C8: (-2.553,-64.395,18.948)
O2': (-6.066,-62.991,16.291)
C6: (-3.865,-66.205,21.563)
C5: (-3.501,-65.511,20.441)
C4: (-4.413,-65.435,19.428)
P: (0.516,-62.251,16.725)
C4': (-3.072,-63.217,15.533)
C2': (-4.892,-62.946,17.075)
C2: (-5.884,-66.581,20.560)
N1: (-5.094,-66.758,21.613)
N3: (-5.644,-65.943,19.423)
N6: (-3.027,-66.314,22.569)
N7: (-2.336,-64.854,20.154)
N9: (-3.797,-64.689,18.474)
O5': (-1.030,-62.135,16.312)
O3': (-4.327,-61.157,15.533)
Image (generated by PyMOL):