Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12684:12685
Extra
PDB:
ATOM 1 O3' C A2683 -1.881 34.144 41.674 1.00 53.52 O
ATOM 2 P U A2684 -2.010 34.101 40.095 1.00 55.25 P
ATOM 3 OP1 U A2684 -2.116 35.506 39.637 1.00 55.75 O
ATOM 4 OP2 U A2684 -3.092 33.134 39.753 1.00 55.31 O
ATOM 5 O5' U A2684 -0.627 33.489 39.676 1.00 54.83 O
ATOM 6 C5' U A2684 0.592 34.157 39.949 1.00 54.69 C
ATOM 7 C4' U A2684 1.750 33.313 39.521 1.00 54.28 C
ATOM 8 O4' U A2684 1.641 32.012 40.141 1.00 53.84 O
ATOM 9 C3' U A2684 1.823 33.029 38.035 1.00 54.46 C
ATOM 10 O3' U A2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 11 C2' U A2684 2.563 31.711 37.974 1.00 53.96 C
ATOM 12 O2' U A2684 3.953 31.930 37.983 1.00 53.72 O
ATOM 13 C1' U A2684 2.168 31.035 39.296 1.00 53.63 C
ATOM 14 N1 U A2684 1.162 30.005 39.082 1.00 53.63 N
ATOM 15 C2 U A2684 1.652 28.838 38.559 1.00 53.33 C
ATOM 16 O2 U A2684 2.807 28.608 38.357 1.00 53.06 O
ATOM 17 N3 U A2684 0.736 27.886 38.266 1.00 53.36 N
ATOM 18 C4 U A2684 -0.619 27.955 38.433 1.00 53.66 C
ATOM 19 O4 U A2684 -1.244 26.955 38.110 1.00 53.63 O
ATOM 20 C5 U A2684 -1.076 29.204 38.972 1.00 53.96 C
ATOM 21 C6 U A2684 -0.191 30.172 39.268 1.00 53.94 C
ATOM 22 P A A2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 23 OP1 A A2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 24 OP2 A A2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 25 O5' A A2685 2.746 33.306 34.983 1.00 52.23 O
TER
ATOM 1 O3' U B2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 2 P A B2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 3 OP1 A B2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 4 OP2 A B2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 5 O5' A B2685 2.746 33.306 34.983 1.00 52.23 O
ATOM 6 C5' A B2685 2.236 32.964 33.720 1.00 52.52 C
ATOM 7 C4' A B2685 3.134 32.006 33.065 1.00 52.21 C
ATOM 8 O4' A B2685 4.448 32.572 33.032 1.00 52.08 O
ATOM 9 C3' A B2685 3.297 30.712 33.802 1.00 51.68 C
ATOM 10 O3' A B2685 2.266 29.798 33.481 1.00 51.75 O
ATOM 11 C2' A B2685 4.697 30.253 33.396 1.00 51.36 C
ATOM 12 O2' A B2685 4.669 29.637 32.114 1.00 51.50 O
ATOM 13 C1' A B2685 5.410 31.581 33.233 1.00 51.58 C
ATOM 14 N9 A B2685 6.262 31.995 34.367 1.00 51.27 N
ATOM 15 C8 A B2685 5.969 32.867 35.405 1.00 51.34 C
ATOM 16 N7 A B2685 6.985 33.177 36.177 1.00 51.06 N
ATOM 17 C5 A B2685 8.011 32.509 35.546 1.00 50.81 C
ATOM 18 C6 A B2685 9.353 32.435 35.824 1.00 50.48 C
ATOM 19 N6 A B2685 9.849 33.069 36.855 1.00 50.35 N
ATOM 20 N1 A B2685 10.157 31.706 35.032 1.00 50.30 N
ATOM 21 C2 A B2685 9.627 31.077 33.985 1.00 50.45 C
ATOM 22 N3 A B2685 8.369 31.078 33.602 1.00 50.78 N
ATOM 23 C4 A B2685 7.612 31.814 34.431 1.00 50.94 C
ATOM 24 P A B2686 1.493 28.999 34.640 1.00 45.74 P
ATOM 25 OP1 A B2686 0.371 28.270 33.991 1.00 45.96 O
ATOM 26 OP2 A B2686 1.190 29.978 35.725 1.00 45.82 O
ATOM 27 O5' A B2686 2.601 27.943 35.118 1.00 45.14 O
TER
ATOM 2 P U A2684 -2.010 34.101 40.095 1.00 55.25 P
ATOM 3 OP1 U A2684 -2.116 35.506 39.637 1.00 55.75 O
ATOM 4 OP2 U A2684 -3.092 33.134 39.753 1.00 55.31 O
ATOM 5 O5' U A2684 -0.627 33.489 39.676 1.00 54.83 O
ATOM 6 C5' U A2684 0.592 34.157 39.949 1.00 54.69 C
ATOM 7 C4' U A2684 1.750 33.313 39.521 1.00 54.28 C
ATOM 8 O4' U A2684 1.641 32.012 40.141 1.00 53.84 O
ATOM 9 C3' U A2684 1.823 33.029 38.035 1.00 54.46 C
ATOM 10 O3' U A2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 11 C2' U A2684 2.563 31.711 37.974 1.00 53.96 C
ATOM 12 O2' U A2684 3.953 31.930 37.983 1.00 53.72 O
ATOM 13 C1' U A2684 2.168 31.035 39.296 1.00 53.63 C
ATOM 14 N1 U A2684 1.162 30.005 39.082 1.00 53.63 N
ATOM 15 C2 U A2684 1.652 28.838 38.559 1.00 53.33 C
ATOM 16 O2 U A2684 2.807 28.608 38.357 1.00 53.06 O
ATOM 17 N3 U A2684 0.736 27.886 38.266 1.00 53.36 N
ATOM 18 C4 U A2684 -0.619 27.955 38.433 1.00 53.66 C
ATOM 19 O4 U A2684 -1.244 26.955 38.110 1.00 53.63 O
ATOM 20 C5 U A2684 -1.076 29.204 38.972 1.00 53.96 C
ATOM 21 C6 U A2684 -0.191 30.172 39.268 1.00 53.94 C
ATOM 22 P A A2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 23 OP1 A A2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 24 OP2 A A2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 25 O5' A A2685 2.746 33.306 34.983 1.00 52.23 O
TER
ATOM 1 O3' U B2684 2.479 34.077 37.335 1.00 54.73 O
ATOM 2 P A B2685 2.071 34.464 35.819 1.00 52.52 P
ATOM 3 OP1 A B2685 2.740 35.757 35.496 1.00 52.80 O
ATOM 4 OP2 A B2685 0.587 34.362 35.705 1.00 52.85 O
ATOM 5 O5' A B2685 2.746 33.306 34.983 1.00 52.23 O
ATOM 6 C5' A B2685 2.236 32.964 33.720 1.00 52.52 C
ATOM 7 C4' A B2685 3.134 32.006 33.065 1.00 52.21 C
ATOM 8 O4' A B2685 4.448 32.572 33.032 1.00 52.08 O
ATOM 9 C3' A B2685 3.297 30.712 33.802 1.00 51.68 C
ATOM 10 O3' A B2685 2.266 29.798 33.481 1.00 51.75 O
ATOM 11 C2' A B2685 4.697 30.253 33.396 1.00 51.36 C
ATOM 12 O2' A B2685 4.669 29.637 32.114 1.00 51.50 O
ATOM 13 C1' A B2685 5.410 31.581 33.233 1.00 51.58 C
ATOM 14 N9 A B2685 6.262 31.995 34.367 1.00 51.27 N
ATOM 15 C8 A B2685 5.969 32.867 35.405 1.00 51.34 C
ATOM 16 N7 A B2685 6.985 33.177 36.177 1.00 51.06 N
ATOM 17 C5 A B2685 8.011 32.509 35.546 1.00 50.81 C
ATOM 18 C6 A B2685 9.353 32.435 35.824 1.00 50.48 C
ATOM 19 N6 A B2685 9.849 33.069 36.855 1.00 50.35 N
ATOM 20 N1 A B2685 10.157 31.706 35.032 1.00 50.30 N
ATOM 21 C2 A B2685 9.627 31.077 33.985 1.00 50.45 C
ATOM 22 N3 A B2685 8.369 31.078 33.602 1.00 50.78 N
ATOM 23 C4 A B2685 7.612 31.814 34.431 1.00 50.94 C
ATOM 24 P A B2686 1.493 28.999 34.640 1.00 45.74 P
ATOM 25 OP1 A B2686 0.371 28.270 33.991 1.00 45.96 O
ATOM 26 OP2 A B2686 1.190 29.978 35.725 1.00 45.82 O
ATOM 27 O5' A B2686 2.601 27.943 35.118 1.00 45.14 O
TER
Atoms:
C4: (-0.619,27.955,38.433)
N3: (0.736,27.886,38.266)
OP1: (-2.116,35.506,39.637)
OP2: (-3.092,33.134,39.753)
C2: (1.652,28.838,38.559)
C1': (2.168,31.035,39.296)
C3': (1.823,33.029,38.035)
O5': (-0.627,33.489,39.676)
O4': (1.641,32.012,40.141)
C5': (0.592,34.157,39.949)
P: (-2.010,34.101,40.095)
C4': (1.750,33.313,39.521)
C2': (2.563,31.711,37.974)
O2': (3.953,31.930,37.983)
N1: (1.162,30.005,39.082)
O4: (-1.244,26.955,38.110)
O2: (2.807,28.608,38.357)
C6: (-0.191,30.172,39.268)
C5: (-1.076,29.204,38.972)
O3': (2.479,34.077,37.335)
N3: (0.736,27.886,38.266)
OP1: (-2.116,35.506,39.637)
OP2: (-3.092,33.134,39.753)
C2: (1.652,28.838,38.559)
C1': (2.168,31.035,39.296)
C3': (1.823,33.029,38.035)
O5': (-0.627,33.489,39.676)
O4': (1.641,32.012,40.141)
C5': (0.592,34.157,39.949)
P: (-2.010,34.101,40.095)
C4': (1.750,33.313,39.521)
C2': (2.563,31.711,37.974)
O2': (3.953,31.930,37.983)
N1: (1.162,30.005,39.082)
O4: (-1.244,26.955,38.110)
O2: (2.807,28.608,38.357)
C6: (-0.191,30.172,39.268)
C5: (-1.076,29.204,38.972)
O3': (2.479,34.077,37.335)
OP1: (2.740,35.757,35.496)
OP2: (0.587,34.362,35.705)
C3': (3.297,30.712,33.802)
C1': (5.410,31.581,33.233)
C5': (2.236,32.964,33.720)
O4': (4.448,32.572,33.032)
C8: (5.969,32.867,35.405)
O2': (4.669,29.637,32.114)
C6: (9.353,32.435,35.824)
C5: (8.011,32.509,35.546)
C4: (7.612,31.814,34.431)
P: (2.071,34.464,35.819)
C4': (3.134,32.006,33.065)
C2': (4.697,30.253,33.396)
C2: (9.627,31.077,33.985)
N1: (10.157,31.706,35.032)
N3: (8.369,31.078,33.602)
N6: (9.849,33.069,36.855)
N7: (6.985,33.177,36.177)
N9: (6.262,31.995,34.367)
O5': (2.746,33.306,34.983)
O3': (2.266,29.798,33.481)
OP2: (0.587,34.362,35.705)
C3': (3.297,30.712,33.802)
C1': (5.410,31.581,33.233)
C5': (2.236,32.964,33.720)
O4': (4.448,32.572,33.032)
C8: (5.969,32.867,35.405)
O2': (4.669,29.637,32.114)
C6: (9.353,32.435,35.824)
C5: (8.011,32.509,35.546)
C4: (7.612,31.814,34.431)
P: (2.071,34.464,35.819)
C4': (3.134,32.006,33.065)
C2': (4.697,30.253,33.396)
C2: (9.627,31.077,33.985)
N1: (10.157,31.706,35.032)
N3: (8.369,31.078,33.602)
N6: (9.849,33.069,36.855)
N7: (6.985,33.177,36.177)
N9: (6.262,31.995,34.367)
O5': (2.746,33.306,34.983)
O3': (2.266,29.798,33.481)
Image (generated by PyMOL):