Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12101:12102
Extra
PDB:
ATOM 1 O3' C A2100 -14.416 26.553 62.499 1.00 54.06 O
ATOM 2 P U A2101 -14.351 27.239 61.060 1.00 50.20 P
ATOM 3 OP1 U A2101 -14.400 28.720 61.273 1.00 50.57 O
ATOM 4 OP2 U A2101 -15.386 26.600 60.212 1.00 50.39 O
ATOM 5 O5' U A2101 -12.907 26.821 60.552 1.00 49.74 O
ATOM 6 C5' U A2101 -11.844 27.762 60.537 1.00 49.68 C
ATOM 7 C4' U A2101 -10.698 27.297 59.691 1.00 49.32 C
ATOM 8 O4' U A2101 -10.443 25.891 59.913 1.00 48.91 O
ATOM 9 C3' U A2101 -10.890 27.378 58.196 1.00 49.49 C
ATOM 10 O3' U A2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 11 C2' U A2101 -9.782 26.451 57.715 1.00 49.02 C
ATOM 12 O2' U A2101 -8.509 27.060 57.891 1.00 48.83 O
ATOM 13 C1' U A2101 -9.899 25.330 58.737 1.00 48.71 C
ATOM 14 N1 U A2101 -10.783 24.249 58.271 1.00 48.73 N
ATOM 15 C2 U A2101 -10.179 23.355 57.433 1.00 48.44 C
ATOM 16 O2 U A2101 -9.037 23.467 57.125 1.00 48.20 O
ATOM 17 N3 U A2101 -10.923 22.317 56.967 1.00 48.45 N
ATOM 18 C4 U A2101 -12.250 22.092 57.248 1.00 48.73 C
ATOM 19 O4 U A2101 -12.796 21.098 56.739 1.00 48.71 O
ATOM 20 C5 U A2101 -12.830 23.073 58.127 1.00 49.02 C
ATOM 21 C6 U A2101 -12.107 24.094 58.596 1.00 49.02 C
ATOM 22 P A A2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 23 OP1 A A2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 24 OP2 A A2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 25 O5' A A2102 -11.204 28.710 55.218 1.00 49.72 O
TER
ATOM 1 O3' U B2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 2 P A B2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 3 OP1 A B2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 4 OP2 A B2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 5 O5' A B2102 -11.204 28.710 55.218 1.00 49.72 O
ATOM 6 C5' A B2102 -12.015 28.585 54.054 1.00 50.01 C
ATOM 7 C4' A B2102 -11.284 27.887 52.930 1.00 49.76 C
ATOM 8 O4' A B2102 -10.244 28.745 52.416 1.00 49.75 O
ATOM 9 C3' A B2102 -10.597 26.596 53.291 1.00 49.23 C
ATOM 10 O3' A B2102 -11.439 25.485 53.085 1.00 49.22 O
ATOM 11 C2' A B2102 -9.370 26.567 52.386 1.00 49.00 C
ATOM 12 O2' A B2102 -9.702 26.015 51.126 1.00 49.10 O
ATOM 13 C1' A B2102 -9.066 28.033 52.189 1.00 49.29 C
ATOM 14 N9 A B2102 -8.031 28.551 53.114 1.00 49.05 N
ATOM 15 C8 A B2102 -8.249 29.000 54.395 1.00 49.10 C
ATOM 16 N7 A B2102 -7.202 29.506 54.990 1.00 48.90 N
ATOM 17 C5 A B2102 -6.207 29.381 54.025 1.00 48.72 C
ATOM 18 C6 A B2102 -4.861 29.740 54.044 1.00 48.48 C
ATOM 19 N6 A B2102 -4.296 30.284 55.109 1.00 48.39 N
ATOM 20 N1 A B2102 -4.117 29.544 52.954 1.00 48.36 N
ATOM 21 C2 A B2102 -4.707 28.979 51.904 1.00 48.47 C
ATOM 22 N3 A B2102 -5.965 28.606 51.744 1.00 48.70 N
ATOM 23 C4 A B2102 -6.690 28.823 52.861 1.00 48.81 C
ATOM 24 P A B2103 -11.754 24.448 54.270 1.00 46.69 P
ATOM 25 OP1 A B2103 -13.098 23.869 53.973 1.00 46.96 O
ATOM 26 OP2 A B2103 -11.536 25.165 55.550 1.00 46.67 O
ATOM 27 O5' A B2103 -10.638 23.347 54.100 1.00 46.17 O
TER
ATOM 2 P U A2101 -14.351 27.239 61.060 1.00 50.20 P
ATOM 3 OP1 U A2101 -14.400 28.720 61.273 1.00 50.57 O
ATOM 4 OP2 U A2101 -15.386 26.600 60.212 1.00 50.39 O
ATOM 5 O5' U A2101 -12.907 26.821 60.552 1.00 49.74 O
ATOM 6 C5' U A2101 -11.844 27.762 60.537 1.00 49.68 C
ATOM 7 C4' U A2101 -10.698 27.297 59.691 1.00 49.32 C
ATOM 8 O4' U A2101 -10.443 25.891 59.913 1.00 48.91 O
ATOM 9 C3' U A2101 -10.890 27.378 58.196 1.00 49.49 C
ATOM 10 O3' U A2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 11 C2' U A2101 -9.782 26.451 57.715 1.00 49.02 C
ATOM 12 O2' U A2101 -8.509 27.060 57.891 1.00 48.83 O
ATOM 13 C1' U A2101 -9.899 25.330 58.737 1.00 48.71 C
ATOM 14 N1 U A2101 -10.783 24.249 58.271 1.00 48.73 N
ATOM 15 C2 U A2101 -10.179 23.355 57.433 1.00 48.44 C
ATOM 16 O2 U A2101 -9.037 23.467 57.125 1.00 48.20 O
ATOM 17 N3 U A2101 -10.923 22.317 56.967 1.00 48.45 N
ATOM 18 C4 U A2101 -12.250 22.092 57.248 1.00 48.73 C
ATOM 19 O4 U A2101 -12.796 21.098 56.739 1.00 48.71 O
ATOM 20 C5 U A2101 -12.830 23.073 58.127 1.00 49.02 C
ATOM 21 C6 U A2101 -12.107 24.094 58.596 1.00 49.02 C
ATOM 22 P A A2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 23 OP1 A A2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 24 OP2 A A2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 25 O5' A A2102 -11.204 28.710 55.218 1.00 49.72 O
TER
ATOM 1 O3' U B2101 -10.785 28.698 57.705 1.00 49.83 O
ATOM 2 P A B2102 -11.814 29.248 56.606 1.00 49.89 P
ATOM 3 OP1 A B2102 -11.726 30.730 56.638 1.00 50.25 O
ATOM 4 OP2 A B2102 -13.113 28.586 56.878 1.00 50.06 O
ATOM 5 O5' A B2102 -11.204 28.710 55.218 1.00 49.72 O
ATOM 6 C5' A B2102 -12.015 28.585 54.054 1.00 50.01 C
ATOM 7 C4' A B2102 -11.284 27.887 52.930 1.00 49.76 C
ATOM 8 O4' A B2102 -10.244 28.745 52.416 1.00 49.75 O
ATOM 9 C3' A B2102 -10.597 26.596 53.291 1.00 49.23 C
ATOM 10 O3' A B2102 -11.439 25.485 53.085 1.00 49.22 O
ATOM 11 C2' A B2102 -9.370 26.567 52.386 1.00 49.00 C
ATOM 12 O2' A B2102 -9.702 26.015 51.126 1.00 49.10 O
ATOM 13 C1' A B2102 -9.066 28.033 52.189 1.00 49.29 C
ATOM 14 N9 A B2102 -8.031 28.551 53.114 1.00 49.05 N
ATOM 15 C8 A B2102 -8.249 29.000 54.395 1.00 49.10 C
ATOM 16 N7 A B2102 -7.202 29.506 54.990 1.00 48.90 N
ATOM 17 C5 A B2102 -6.207 29.381 54.025 1.00 48.72 C
ATOM 18 C6 A B2102 -4.861 29.740 54.044 1.00 48.48 C
ATOM 19 N6 A B2102 -4.296 30.284 55.109 1.00 48.39 N
ATOM 20 N1 A B2102 -4.117 29.544 52.954 1.00 48.36 N
ATOM 21 C2 A B2102 -4.707 28.979 51.904 1.00 48.47 C
ATOM 22 N3 A B2102 -5.965 28.606 51.744 1.00 48.70 N
ATOM 23 C4 A B2102 -6.690 28.823 52.861 1.00 48.81 C
ATOM 24 P A B2103 -11.754 24.448 54.270 1.00 46.69 P
ATOM 25 OP1 A B2103 -13.098 23.869 53.973 1.00 46.96 O
ATOM 26 OP2 A B2103 -11.536 25.165 55.550 1.00 46.67 O
ATOM 27 O5' A B2103 -10.638 23.347 54.100 1.00 46.17 O
TER
Atoms:
C4: (-12.250,22.092,57.248)
N3: (-10.923,22.317,56.967)
OP1: (-14.400,28.720,61.273)
OP2: (-15.386,26.600,60.212)
C2: (-10.179,23.355,57.433)
C1': (-9.899,25.330,58.737)
C3': (-10.890,27.378,58.196)
O5': (-12.907,26.821,60.552)
O4': (-10.443,25.891,59.913)
C5': (-11.844,27.762,60.537)
P: (-14.351,27.239,61.060)
C4': (-10.698,27.297,59.691)
C2': (-9.782,26.451,57.715)
O2': (-8.509,27.060,57.891)
N1: (-10.783,24.249,58.271)
O4: (-12.796,21.098,56.739)
O2: (-9.037,23.467,57.125)
C6: (-12.107,24.094,58.596)
C5: (-12.830,23.073,58.127)
O3': (-10.785,28.698,57.705)
N3: (-10.923,22.317,56.967)
OP1: (-14.400,28.720,61.273)
OP2: (-15.386,26.600,60.212)
C2: (-10.179,23.355,57.433)
C1': (-9.899,25.330,58.737)
C3': (-10.890,27.378,58.196)
O5': (-12.907,26.821,60.552)
O4': (-10.443,25.891,59.913)
C5': (-11.844,27.762,60.537)
P: (-14.351,27.239,61.060)
C4': (-10.698,27.297,59.691)
C2': (-9.782,26.451,57.715)
O2': (-8.509,27.060,57.891)
N1: (-10.783,24.249,58.271)
O4: (-12.796,21.098,56.739)
O2: (-9.037,23.467,57.125)
C6: (-12.107,24.094,58.596)
C5: (-12.830,23.073,58.127)
O3': (-10.785,28.698,57.705)
OP1: (-11.726,30.730,56.638)
OP2: (-13.113,28.586,56.878)
C3': (-10.597,26.596,53.291)
C1': (-9.066,28.033,52.189)
C5': (-12.015,28.585,54.054)
O4': (-10.244,28.745,52.416)
C8: (-8.249,29.000,54.395)
O2': (-9.702,26.015,51.126)
C6: (-4.861,29.740,54.044)
C5: (-6.207,29.381,54.025)
C4: (-6.690,28.823,52.861)
P: (-11.814,29.248,56.606)
C4': (-11.284,27.887,52.930)
C2': (-9.370,26.567,52.386)
C2: (-4.707,28.979,51.904)
N1: (-4.117,29.544,52.954)
N3: (-5.965,28.606,51.744)
N6: (-4.296,30.284,55.109)
N7: (-7.202,29.506,54.990)
N9: (-8.031,28.551,53.114)
O5': (-11.204,28.710,55.218)
O3': (-11.439,25.485,53.085)
OP2: (-13.113,28.586,56.878)
C3': (-10.597,26.596,53.291)
C1': (-9.066,28.033,52.189)
C5': (-12.015,28.585,54.054)
O4': (-10.244,28.745,52.416)
C8: (-8.249,29.000,54.395)
O2': (-9.702,26.015,51.126)
C6: (-4.861,29.740,54.044)
C5: (-6.207,29.381,54.025)
C4: (-6.690,28.823,52.861)
P: (-11.814,29.248,56.606)
C4': (-11.284,27.887,52.930)
C2': (-9.370,26.567,52.386)
C2: (-4.707,28.979,51.904)
N1: (-4.117,29.544,52.954)
N3: (-5.965,28.606,51.744)
N6: (-4.296,30.284,55.109)
N7: (-7.202,29.506,54.990)
N9: (-8.031,28.551,53.114)
O5': (-11.204,28.710,55.218)
O3': (-11.439,25.485,53.085)
Image (generated by PyMOL):