ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:12673:12674

Extra

PDB:
ATOM 1 O3' U A2672 -1.148 18.020 62.309 1.00 42.72 O
ATOM 2 P U A2673 0.215 18.084 63.123 1.00 42.16 P
ATOM 3 OP1 U A2673 -0.140 17.781 64.499 1.00 42.13 O
ATOM 4 OP2 U A2673 0.878 19.383 62.813 1.00 42.27 O
ATOM 5 O5' U A2673 1.048 16.901 62.503 1.00 41.80 O
ATOM 6 C5' U A2673 0.721 15.548 62.788 1.00 41.62 C
ATOM 7 C4' U A2673 1.561 14.597 61.980 1.00 41.33 C
ATOM 8 O4' U A2673 1.363 14.849 60.564 1.00 41.48 O
ATOM 9 C3' U A2673 3.042 14.719 62.193 1.00 41.06 C
ATOM 10 O3' U A2673 3.460 13.974 63.313 1.00 40.82 O
ATOM 11 C2' U A2673 3.637 14.236 60.865 1.00 40.93 C
ATOM 12 O2' U A2673 3.767 12.815 60.838 1.00 40.69 O
ATOM 13 C1' U A2673 2.560 14.663 59.860 1.00 41.26 C
ATOM 14 N1 U A2673 2.877 15.931 59.205 1.00 41.44 N
ATOM 15 C2 U A2673 3.501 15.949 57.973 1.00 41.40 C
ATOM 16 O2 U A2673 3.827 14.957 57.386 1.00 41.22 O
ATOM 17 N3 U A2673 3.745 17.164 57.433 1.00 41.60 N
ATOM 18 C4 U A2673 3.362 18.336 58.024 1.00 41.84 C
ATOM 19 O4 U A2673 3.615 19.364 57.436 1.00 42.02 O
ATOM 20 C5 U A2673 2.686 18.282 59.274 1.00 41.88 C
ATOM 21 C6 U A2673 2.458 17.089 59.807 1.00 41.68 C
ATOM 22 P G A2674 4.223 14.675 64.535 1.00 50.44 P
ATOM 23 OP1 G A2674 4.256 13.679 65.619 1.00 50.25 O
ATOM 24 OP2 G A2674 3.575 15.982 64.789 1.00 50.77 O
ATOM 25 O5' G A2674 5.688 14.894 63.949 1.00 50.22 O
TER

ATOM 1 O3' U B2673 3.460 13.974 63.313 1.00 40.82 O
ATOM 2 P G B2674 4.223 14.675 64.535 1.00 50.44 P
ATOM 3 OP1 G B2674 4.256 13.679 65.619 1.00 50.25 O
ATOM 4 OP2 G B2674 3.575 15.982 64.789 1.00 50.77 O
ATOM 5 O5' G B2674 5.688 14.894 63.949 1.00 50.22 O
ATOM 6 C5' G B2674 6.376 16.130 64.091 1.00 50.30 C
ATOM 7 C4' G B2674 7.801 16.013 63.609 1.00 50.05 C
ATOM 8 O4' G B2674 8.430 14.886 64.266 1.00 49.74 O
ATOM 9 C3' G B2674 7.989 15.721 62.129 1.00 50.02 C
ATOM 10 O3' G B2674 7.885 16.861 61.290 1.00 50.26 O
ATOM 11 C2' G B2674 9.353 15.039 62.093 1.00 49.68 C
ATOM 12 O2' G B2674 10.426 15.976 62.175 1.00 49.66 O
ATOM 13 C1' G B2674 9.287 14.219 63.379 1.00 49.52 C
ATOM 14 N9 G B2674 8.704 12.902 63.108 1.00 49.43 N
ATOM 15 C8 G B2674 7.401 12.461 63.286 1.00 49.57 C
ATOM 16 N7 G B2674 7.215 11.225 62.863 1.00 49.45 N
ATOM 17 C5 G B2674 8.464 10.837 62.363 1.00 49.20 C
ATOM 18 C6 G B2674 8.916 9.623 61.759 1.00 49.00 C
ATOM 19 O6 G B2674 8.267 8.599 61.525 1.00 48.99 O
ATOM 20 N1 G B2674 10.262 9.681 61.391 1.00 48.80 N
ATOM 21 C2 G B2674 11.057 10.794 61.595 1.00 48.81 C
ATOM 22 N2 G B2674 12.342 10.708 61.213 1.00 48.62 N
ATOM 23 N3 G B2674 10.651 11.930 62.141 1.00 49.01 N
ATOM 24 C4 G B2674 9.366 11.876 62.492 1.00 49.19 C
ATOM 25 P U B2675 6.483 17.259 60.609 1.00 56.55 P
ATOM 26 OP1 U B2675 6.416 18.713 60.590 1.00 56.82 O
ATOM 27 OP2 U B2675 5.435 16.527 61.320 1.00 56.58 O
ATOM 28 O5' U B2675 6.600 16.741 59.116 1.00 56.52 O
TER

Atoms:
C4: (3.362,18.336,58.024)
N3: (3.745,17.164,57.433)
OP1: (-0.140,17.781,64.499)
OP2: (0.878,19.383,62.813)
C2: (3.501,15.949,57.973)
C1': (2.560,14.663,59.860)
C3': (3.042,14.719,62.193)
O5': (1.048,16.901,62.503)
O4': (1.363,14.849,60.564)
C5': (0.721,15.548,62.788)
P: (0.215,18.084,63.123)
C4': (1.561,14.597,61.980)
C2': (3.637,14.236,60.865)
O2': (3.767,12.815,60.838)
N1: (2.877,15.931,59.205)
O4: (3.615,19.364,57.436)
O2: (3.827,14.957,57.386)
C6: (2.458,17.089,59.807)
C5: (2.686,18.282,59.274)
O3': (3.460,13.974,63.313)
OP1: (4.256,13.679,65.619)
OP2: (3.575,15.982,64.789)
C3': (7.989,15.721,62.129)
C1': (9.287,14.219,63.379)
C5': (6.376,16.130,64.091)
O6: (8.267,8.599,61.525)
O4': (8.430,14.886,64.266)
C8: (7.401,12.461,63.286)
C2: (11.057,10.794,61.595)
C6: (8.916,9.623,61.759)
C5: (8.464,10.837,62.363)
C4: (9.366,11.876,62.492)
P: (4.223,14.675,64.535)
C4': (7.801,16.013,63.609)
C2': (9.353,15.039,62.093)
O2': (10.426,15.976,62.175)
N1: (10.262,9.681,61.391)
N2: (12.342,10.708,61.213)
N3: (10.651,11.930,62.141)
N7: (7.215,11.225,62.863)
N9: (8.704,12.902,63.108)
O5': (5.688,14.894,63.949)
O3': (7.885,16.861,61.290)
Image (generated by PyMOL):
PyMOL image
show in jmol