Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 60.600 127.592 -1.872 1.00 77.52 O
ATOM 2 P C A 279 59.536 128.072 -0.762 1.00 77.80 P
ATOM 3 OP1 C A 279 59.377 129.543 -0.907 1.00 76.88 O
ATOM 4 OP2 C A 279 59.952 127.507 0.549 1.00 78.43 O
ATOM 5 O5' C A 279 58.172 127.367 -1.199 1.00 76.18 O
ATOM 6 C5' C A 279 57.576 127.635 -2.486 1.00 73.70 C
ATOM 7 C4' C A 279 56.384 126.732 -2.717 1.00 72.30 C
ATOM 8 O4' C A 279 56.812 125.345 -2.735 1.00 71.90 O
ATOM 9 C3' C A 279 55.297 126.775 -1.653 1.00 71.70 C
ATOM 10 O3' C A 279 54.405 127.865 -1.879 1.00 71.90 O
ATOM 11 C2' C A 279 54.598 125.434 -1.847 1.00 70.94 C
ATOM 12 O2' C A 279 53.661 125.452 -2.906 1.00 69.37 O
ATOM 13 C1' C A 279 55.775 124.524 -2.218 1.00 70.99 C
ATOM 14 N1 C A 279 56.313 123.715 -1.105 1.00 70.85 N
ATOM 15 C2 C A 279 55.606 122.566 -0.694 1.00 70.87 C
ATOM 16 O2 C A 279 54.526 122.286 -1.246 1.00 70.81 O
ATOM 17 N3 C A 279 56.115 121.796 0.298 1.00 70.59 N
ATOM 18 C4 C A 279 57.267 122.137 0.884 1.00 70.69 C
ATOM 19 N4 C A 279 57.735 121.341 1.854 1.00 70.71 N
ATOM 20 C5 C A 279 57.993 123.307 0.503 1.00 70.74 C
ATOM 21 C6 C A 279 57.485 124.059 -0.486 1.00 70.79 C
ATOM 22 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 23 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 24 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 25 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
TER
ATOM 1 O3' A B 348 53.364 112.933 4.558 1.00 82.96 O
ATOM 2 P C B 349 54.171 112.650 3.198 1.00 85.66 P
ATOM 3 OP1 C B 349 54.317 111.175 3.080 1.00 86.10 O
ATOM 4 OP2 C B 349 55.385 113.513 3.197 1.00 85.76 O
ATOM 5 O5' C B 349 53.182 113.156 2.053 1.00 84.04 O
ATOM 6 C5' C B 349 51.863 112.592 1.918 1.00 83.93 C
ATOM 7 C4' C B 349 51.001 113.471 1.043 1.00 84.26 C
ATOM 8 O4' C B 349 50.876 114.785 1.655 1.00 84.11 O
ATOM 9 C3' C B 349 51.546 113.765 -0.346 1.00 84.50 C
ATOM 10 O3' C B 349 51.295 112.694 -1.260 1.00 85.29 O
ATOM 11 C2' C B 349 50.814 115.055 -0.706 1.00 83.47 C
ATOM 12 O2' C B 349 49.472 114.844 -1.100 1.00 82.88 O
ATOM 13 C1' C B 349 50.817 115.781 0.642 1.00 82.70 C
ATOM 14 N1 C B 349 51.964 116.700 0.811 1.00 80.90 N
ATOM 15 C2 C B 349 51.842 118.027 0.361 1.00 80.35 C
ATOM 16 O2 C B 349 50.771 118.396 -0.159 1.00 79.74 O
ATOM 17 N3 C B 349 52.893 118.872 0.505 1.00 79.83 N
ATOM 18 C4 C B 349 54.024 118.442 1.072 1.00 79.84 C
ATOM 19 N4 C B 349 55.034 119.309 1.194 1.00 79.32 N
ATOM 20 C5 C B 349 54.172 117.102 1.540 1.00 79.77 C
ATOM 21 C6 C B 349 53.130 116.275 1.391 1.00 80.30 C
ATOM 22 P G B 350 52.388 112.331 -2.391 1.00 86.42 P
ATOM 23 OP1 G B 350 51.805 111.242 -3.225 1.00 85.98 O
ATOM 24 OP2 G B 350 53.711 112.120 -1.734 1.00 84.46 O
ATOM 25 O5' G B 350 52.463 113.649 -3.292 1.00 85.38 O
TER
ATOM 2 P C A 279 59.536 128.072 -0.762 1.00 77.80 P
ATOM 3 OP1 C A 279 59.377 129.543 -0.907 1.00 76.88 O
ATOM 4 OP2 C A 279 59.952 127.507 0.549 1.00 78.43 O
ATOM 5 O5' C A 279 58.172 127.367 -1.199 1.00 76.18 O
ATOM 6 C5' C A 279 57.576 127.635 -2.486 1.00 73.70 C
ATOM 7 C4' C A 279 56.384 126.732 -2.717 1.00 72.30 C
ATOM 8 O4' C A 279 56.812 125.345 -2.735 1.00 71.90 O
ATOM 9 C3' C A 279 55.297 126.775 -1.653 1.00 71.70 C
ATOM 10 O3' C A 279 54.405 127.865 -1.879 1.00 71.90 O
ATOM 11 C2' C A 279 54.598 125.434 -1.847 1.00 70.94 C
ATOM 12 O2' C A 279 53.661 125.452 -2.906 1.00 69.37 O
ATOM 13 C1' C A 279 55.775 124.524 -2.218 1.00 70.99 C
ATOM 14 N1 C A 279 56.313 123.715 -1.105 1.00 70.85 N
ATOM 15 C2 C A 279 55.606 122.566 -0.694 1.00 70.87 C
ATOM 16 O2 C A 279 54.526 122.286 -1.246 1.00 70.81 O
ATOM 17 N3 C A 279 56.115 121.796 0.298 1.00 70.59 N
ATOM 18 C4 C A 279 57.267 122.137 0.884 1.00 70.69 C
ATOM 19 N4 C A 279 57.735 121.341 1.854 1.00 70.71 N
ATOM 20 C5 C A 279 57.993 123.307 0.503 1.00 70.74 C
ATOM 21 C6 C A 279 57.485 124.059 -0.486 1.00 70.79 C
ATOM 22 P G A 280 53.883 128.747 -0.640 1.00 72.02 P
ATOM 23 OP1 G A 280 53.017 129.818 -1.205 1.00 71.67 O
ATOM 24 OP2 G A 280 55.061 129.114 0.194 1.00 70.85 O
ATOM 25 O5' G A 280 52.959 127.749 0.189 1.00 71.98 O
TER
ATOM 1 O3' A B 348 53.364 112.933 4.558 1.00 82.96 O
ATOM 2 P C B 349 54.171 112.650 3.198 1.00 85.66 P
ATOM 3 OP1 C B 349 54.317 111.175 3.080 1.00 86.10 O
ATOM 4 OP2 C B 349 55.385 113.513 3.197 1.00 85.76 O
ATOM 5 O5' C B 349 53.182 113.156 2.053 1.00 84.04 O
ATOM 6 C5' C B 349 51.863 112.592 1.918 1.00 83.93 C
ATOM 7 C4' C B 349 51.001 113.471 1.043 1.00 84.26 C
ATOM 8 O4' C B 349 50.876 114.785 1.655 1.00 84.11 O
ATOM 9 C3' C B 349 51.546 113.765 -0.346 1.00 84.50 C
ATOM 10 O3' C B 349 51.295 112.694 -1.260 1.00 85.29 O
ATOM 11 C2' C B 349 50.814 115.055 -0.706 1.00 83.47 C
ATOM 12 O2' C B 349 49.472 114.844 -1.100 1.00 82.88 O
ATOM 13 C1' C B 349 50.817 115.781 0.642 1.00 82.70 C
ATOM 14 N1 C B 349 51.964 116.700 0.811 1.00 80.90 N
ATOM 15 C2 C B 349 51.842 118.027 0.361 1.00 80.35 C
ATOM 16 O2 C B 349 50.771 118.396 -0.159 1.00 79.74 O
ATOM 17 N3 C B 349 52.893 118.872 0.505 1.00 79.83 N
ATOM 18 C4 C B 349 54.024 118.442 1.072 1.00 79.84 C
ATOM 19 N4 C B 349 55.034 119.309 1.194 1.00 79.32 N
ATOM 20 C5 C B 349 54.172 117.102 1.540 1.00 79.77 C
ATOM 21 C6 C B 349 53.130 116.275 1.391 1.00 80.30 C
ATOM 22 P G B 350 52.388 112.331 -2.391 1.00 86.42 P
ATOM 23 OP1 G B 350 51.805 111.242 -3.225 1.00 85.98 O
ATOM 24 OP2 G B 350 53.711 112.120 -1.734 1.00 84.46 O
ATOM 25 O5' G B 350 52.463 113.649 -3.292 1.00 85.38 O
TER
Atoms:
C2: (55.606,122.566,-0.694)
OP1: (59.377,129.543,-0.907)
OP2: (59.952,127.507,0.549)
C4: (57.267,122.137,0.884)
O5': (58.172,127.367,-1.199)
C3': (55.297,126.775,-1.653)
C1': (55.775,124.524,-2.218)
O4': (56.812,125.345,-2.735)
C5': (57.576,127.635,-2.486)
P: (59.536,128.072,-0.762)
O2: (54.526,122.286,-1.246)
C4': (56.384,126.732,-2.717)
C2': (54.598,125.434,-1.847)
O2': (53.661,125.452,-2.906)
N1: (56.313,123.715,-1.105)
N3: (56.115,121.796,0.298)
N4: (57.735,121.341,1.854)
C6: (57.485,124.059,-0.486)
C5: (57.993,123.307,0.503)
O3': (54.405,127.865,-1.879)
OP1: (59.377,129.543,-0.907)
OP2: (59.952,127.507,0.549)
C4: (57.267,122.137,0.884)
O5': (58.172,127.367,-1.199)
C3': (55.297,126.775,-1.653)
C1': (55.775,124.524,-2.218)
O4': (56.812,125.345,-2.735)
C5': (57.576,127.635,-2.486)
P: (59.536,128.072,-0.762)
O2: (54.526,122.286,-1.246)
C4': (56.384,126.732,-2.717)
C2': (54.598,125.434,-1.847)
O2': (53.661,125.452,-2.906)
N1: (56.313,123.715,-1.105)
N3: (56.115,121.796,0.298)
N4: (57.735,121.341,1.854)
C6: (57.485,124.059,-0.486)
C5: (57.993,123.307,0.503)
O3': (54.405,127.865,-1.879)
C2: (51.842,118.027,0.361)
OP1: (54.317,111.175,3.080)
OP2: (55.385,113.513,3.197)
C4: (54.024,118.442,1.072)
O5': (53.182,113.156,2.053)
C3': (51.546,113.765,-0.346)
C1': (50.817,115.781,0.642)
O4': (50.876,114.785,1.655)
C5': (51.863,112.592,1.918)
P: (54.171,112.650,3.198)
O2: (50.771,118.396,-0.159)
C4': (51.001,113.471,1.043)
C2': (50.814,115.055,-0.706)
O2': (49.472,114.844,-1.100)
N1: (51.964,116.700,0.811)
N3: (52.893,118.872,0.505)
N4: (55.034,119.309,1.194)
C6: (53.130,116.275,1.391)
C5: (54.172,117.102,1.540)
O3': (51.295,112.694,-1.260)
OP1: (54.317,111.175,3.080)
OP2: (55.385,113.513,3.197)
C4: (54.024,118.442,1.072)
O5': (53.182,113.156,2.053)
C3': (51.546,113.765,-0.346)
C1': (50.817,115.781,0.642)
O4': (50.876,114.785,1.655)
C5': (51.863,112.592,1.918)
P: (54.171,112.650,3.198)
O2: (50.771,118.396,-0.159)
C4': (51.001,113.471,1.043)
C2': (50.814,115.055,-0.706)
O2': (49.472,114.844,-1.100)
N1: (51.964,116.700,0.811)
N3: (52.893,118.872,0.505)
N4: (55.034,119.309,1.194)
C6: (53.130,116.275,1.391)
C5: (54.172,117.102,1.540)
O3': (51.295,112.694,-1.260)
Image (generated by PyMOL):