ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2457:A2458

Extra

PDB:
ATOM 1 O3' C A2456 78.412 -34.494 16.440 1.00 37.39 O
ATOM 2 P U A2457 77.524 -35.255 15.352 1.00 41.53 P
ATOM 3 OP1 U A2457 76.770 -34.263 14.521 1.00 36.57 O
ATOM 4 OP2 U A2457 76.781 -36.297 16.109 1.00 45.58 O
ATOM 5 O5' U A2457 78.611 -35.982 14.433 1.00 45.00 O
ATOM 6 C5' U A2457 79.591 -35.232 13.689 1.00 48.75 C
ATOM 7 C4' U A2457 80.636 -36.160 13.099 1.00 43.59 C
ATOM 8 O4' U A2457 81.324 -36.836 14.187 1.00 42.24 O
ATOM 9 C3' U A2457 80.112 -37.287 12.207 1.00 41.78 C
ATOM 10 O3' U A2457 79.977 -36.900 10.832 1.00 34.76 O
ATOM 11 C2' U A2457 81.178 -38.372 12.358 1.00 44.83 C
ATOM 12 O2' U A2457 82.236 -38.194 11.437 1.00 40.67 O
ATOM 13 C1' U A2457 81.664 -38.161 13.797 1.00 43.03 C
ATOM 14 N1 U A2457 81.135 -39.124 14.785 1.00 46.67 N
ATOM 15 C2 U A2457 82.008 -40.085 15.322 1.00 51.00 C
ATOM 16 O2 U A2457 83.166 -40.212 14.961 1.00 55.03 O
ATOM 17 N3 U A2457 81.462 -40.905 16.277 1.00 45.82 N
ATOM 18 C4 U A2457 80.156 -40.909 16.725 1.00 41.84 C
ATOM 19 O4 U A2457 79.841 -41.637 17.670 1.00 42.14 O
ATOM 20 C5 U A2457 79.309 -39.942 16.101 1.00 48.22 C
ATOM 21 C6 U A2457 79.813 -39.096 15.187 1.00 49.48 C
ATOM 22 P G A2458 78.871 -37.605 9.880 1.00 42.79 P
ATOM 23 OP1 G A2458 79.322 -37.425 8.469 1.00 48.99 O
ATOM 24 OP2 G A2458 77.532 -37.104 10.304 1.00 39.73 O
ATOM 25 O5' G A2458 78.907 -39.172 10.207 1.00 39.12 O
TER

ATOM 1 O3' U B2457 79.977 -36.900 10.832 1.00 34.76 O
ATOM 2 P G B2458 78.871 -37.605 9.880 1.00 42.79 P
ATOM 3 OP1 G B2458 79.322 -37.425 8.469 1.00 48.99 O
ATOM 4 OP2 G B2458 77.532 -37.104 10.304 1.00 39.73 O
ATOM 5 O5' G B2458 78.907 -39.172 10.207 1.00 39.12 O
ATOM 6 C5' G B2458 77.702 -39.942 10.173 1.00 38.08 C
ATOM 7 C4' G B2458 77.996 -41.385 9.850 1.00 39.76 C
ATOM 8 O4' G B2458 78.425 -41.495 8.471 1.00 45.37 O
ATOM 9 C3' G B2458 79.118 -41.983 10.667 1.00 37.91 C
ATOM 10 O3' G B2458 78.639 -42.497 11.892 1.00 34.70 O
ATOM 11 C2' G B2458 79.656 -43.082 9.756 1.00 43.54 C
ATOM 12 O2' G B2458 78.979 -44.312 9.872 1.00 40.54 O
ATOM 13 C1' G B2458 79.441 -42.476 8.366 1.00 48.80 C
ATOM 14 N9 G B2458 80.637 -41.828 7.834 1.00 50.88 N
ATOM 15 C8 G B2458 80.877 -40.475 7.749 1.00 49.77 C
ATOM 16 N7 G B2458 82.033 -40.192 7.212 1.00 52.64 N
ATOM 17 C5 G B2458 82.593 -41.428 6.926 1.00 53.75 C
ATOM 18 C6 G B2458 83.840 -41.754 6.334 1.00 55.55 C
ATOM 19 O6 G B2458 84.716 -40.984 5.918 1.00 64.57 O
ATOM 20 N1 G B2458 84.023 -43.135 6.250 1.00 52.33 N
ATOM 21 C2 G B2458 83.116 -44.078 6.682 1.00 54.06 C
ATOM 22 N2 G B2458 83.474 -45.357 6.527 1.00 48.76 N
ATOM 23 N3 G B2458 81.942 -43.784 7.227 1.00 51.84 N
ATOM 24 C4 G B2458 81.747 -42.451 7.316 1.00 51.44 C
ATOM 25 P U B2459 78.874 -41.680 13.260 1.00 37.66 P
ATOM 26 OP1 U B2459 78.121 -42.363 14.338 1.00 42.70 O
ATOM 27 OP2 U B2459 78.601 -40.265 12.971 1.00 42.69 O
ATOM 28 O5' U B2459 80.409 -41.880 13.639 1.00 43.09 O
TER

Atoms:
C4: (80.156,-40.909,16.725)
N3: (81.462,-40.905,16.277)
OP1: (76.770,-34.263,14.521)
OP2: (76.781,-36.297,16.109)
C2: (82.008,-40.085,15.322)
C1': (81.664,-38.161,13.797)
C3': (80.112,-37.287,12.207)
O5': (78.611,-35.982,14.433)
O4': (81.324,-36.836,14.187)
C5': (79.591,-35.232,13.689)
P: (77.524,-35.255,15.352)
C4': (80.636,-36.160,13.099)
C2': (81.178,-38.372,12.358)
O2': (82.236,-38.194,11.437)
N1: (81.135,-39.124,14.785)
O4: (79.841,-41.637,17.670)
O2: (83.166,-40.212,14.961)
C6: (79.813,-39.096,15.187)
C5: (79.309,-39.942,16.101)
O3': (79.977,-36.900,10.832)
OP1: (79.322,-37.425,8.469)
OP2: (77.532,-37.104,10.304)
C3': (79.118,-41.983,10.667)
C1': (79.441,-42.476,8.366)
C5': (77.702,-39.942,10.173)
O6: (84.716,-40.984,5.918)
O4': (78.425,-41.495,8.471)
C8: (80.877,-40.475,7.749)
C2: (83.116,-44.078,6.682)
C6: (83.840,-41.754,6.334)
C5: (82.593,-41.428,6.926)
C4: (81.747,-42.451,7.316)
P: (78.871,-37.605,9.880)
C4': (77.996,-41.385,9.850)
C2': (79.656,-43.082,9.756)
O2': (78.979,-44.312,9.872)
N1: (84.023,-43.135,6.250)
N2: (83.474,-45.357,6.527)
N3: (81.942,-43.784,7.227)
N7: (82.033,-40.192,7.212)
N9: (80.637,-41.828,7.834)
O5': (78.907,-39.172,10.207)
O3': (78.639,-42.497,11.892)
Image (generated by PyMOL):
PyMOL image
show in jmol