ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1LNG:B35:B36

Extra

PDB:
ATOM 1 O3' G A 34 13.106 -3.860 67.254 1.00 42.87 O
ATOM 2 P U A 35 13.693 -3.205 68.590 1.00 45.58 P
ATOM 3 OP1 U A 35 12.954 -3.728 69.756 1.00 46.46 O
ATOM 4 OP2 U A 35 13.819 -1.736 68.430 1.00 45.62 O
ATOM 5 O5' U A 35 15.159 -3.838 68.574 1.00 47.49 O
ATOM 6 C5' U A 35 16.244 -2.939 68.612 1.00 50.71 C
ATOM 7 C4' U A 35 17.488 -3.446 67.908 1.00 52.66 C
ATOM 8 O4' U A 35 17.454 -3.091 66.502 1.00 52.45 O
ATOM 9 C3' U A 35 18.724 -2.782 68.483 1.00 53.91 C
ATOM 10 O3' U A 35 19.329 -3.651 69.437 1.00 56.99 O
ATOM 11 C2' U A 35 19.613 -2.448 67.281 1.00 52.69 C
ATOM 12 O2' U A 35 20.626 -3.404 67.045 1.00 52.56 O
ATOM 13 C1' U A 35 18.633 -2.414 66.109 1.00 51.76 C
ATOM 14 N1 U A 35 18.260 -1.042 65.649 1.00 50.21 N
ATOM 15 C2 U A 35 19.068 -0.387 64.748 1.00 49.82 C
ATOM 16 O2 U A 35 20.091 -0.869 64.294 1.00 49.32 O
ATOM 17 N3 U A 35 18.633 0.862 64.387 1.00 49.59 N
ATOM 18 C4 U A 35 17.495 1.503 64.828 1.00 49.25 C
ATOM 19 O4 U A 35 17.232 2.623 64.425 1.00 48.87 O
ATOM 20 C5 U A 35 16.701 0.759 65.760 1.00 49.89 C
ATOM 21 C6 U A 35 17.108 -0.459 66.124 1.00 50.22 C
ATOM 22 P A A 36 18.990 -3.452 70.992 1.00 58.97 P
ATOM 23 OP1 A A 36 19.707 -4.513 71.733 1.00 59.29 O
ATOM 24 OP2 A A 36 17.522 -3.337 71.138 1.00 59.44 O
ATOM 25 O5' A A 36 19.600 -2.024 71.407 1.00 58.92 O
TER

ATOM 1 O3' U B 35 19.329 -3.651 69.437 1.00 56.99 O
ATOM 2 P A B 36 18.990 -3.452 70.992 1.00 58.97 P
ATOM 3 OP1 A B 36 19.707 -4.513 71.733 1.00 59.29 O
ATOM 4 OP2 A B 36 17.522 -3.337 71.138 1.00 59.44 O
ATOM 5 O5' A B 36 19.600 -2.024 71.407 1.00 58.92 O
ATOM 6 C5' A B 36 20.562 -1.336 70.624 1.00 59.45 C
ATOM 7 C4' A B 36 21.832 -1.134 71.427 1.00 59.91 C
ATOM 8 O4' A B 36 22.265 -2.416 71.942 1.00 60.00 O
ATOM 9 C3' A B 36 22.997 -0.522 70.655 1.00 59.88 C
ATOM 10 O3' A B 36 23.258 0.775 71.225 1.00 59.41 O
ATOM 11 C2' A B 36 24.143 -1.526 70.815 1.00 60.41 C
ATOM 12 O2' A B 36 25.073 -1.102 71.793 1.00 61.45 O
ATOM 13 C1' A B 36 23.497 -2.793 71.355 1.00 59.83 C
ATOM 14 N9 A B 36 23.303 -3.958 70.470 1.00 59.03 N
ATOM 15 C8 A B 36 22.244 -4.244 69.648 1.00 58.45 C
ATOM 16 N7 A B 36 22.348 -5.390 69.015 1.00 57.33 N
ATOM 17 C5 A B 36 23.554 -5.903 69.455 1.00 57.29 C
ATOM 18 C6 A B 36 24.244 -7.094 69.166 1.00 57.22 C
ATOM 19 N6 A B 36 23.793 -8.023 68.320 1.00 57.22 N
ATOM 20 N1 A B 36 25.427 -7.299 69.776 1.00 57.00 N
ATOM 21 C2 A B 36 25.880 -6.372 70.623 1.00 57.42 C
ATOM 22 N3 A B 36 25.325 -5.219 70.979 1.00 57.58 N
ATOM 23 C4 A B 36 24.152 -5.039 70.352 1.00 58.23 C
ATOM 24 P A B 37 24.551 1.695 70.964 1.00 59.54 P
ATOM 25 OP1 A B 37 25.706 1.072 71.647 1.00 59.66 O
ATOM 26 OP2 A B 37 24.200 3.090 71.320 1.00 59.59 O
ATOM 27 O5' A B 37 24.810 1.659 69.393 1.00 58.49 O
TER

Atoms:
C4: (17.495,1.503,64.828)
N3: (18.633,0.862,64.387)
OP1: (12.954,-3.728,69.756)
OP2: (13.819,-1.736,68.430)
C2: (19.068,-0.387,64.748)
C1': (18.633,-2.414,66.109)
C3': (18.724,-2.782,68.483)
O5': (15.159,-3.838,68.574)
O4': (17.454,-3.091,66.502)
C5': (16.244,-2.939,68.612)
P: (13.693,-3.205,68.590)
C4': (17.488,-3.446,67.908)
C2': (19.613,-2.448,67.281)
O2': (20.626,-3.404,67.045)
N1: (18.260,-1.042,65.649)
O4: (17.232,2.623,64.425)
O2: (20.091,-0.869,64.294)
C6: (17.108,-0.459,66.124)
C5: (16.701,0.759,65.760)
O3': (19.329,-3.651,69.437)
OP1: (19.707,-4.513,71.733)
OP2: (17.522,-3.337,71.138)
C3': (22.997,-0.522,70.655)
C1': (23.497,-2.793,71.355)
C5': (20.562,-1.336,70.624)
O4': (22.265,-2.416,71.942)
C8: (22.244,-4.244,69.648)
O2': (25.073,-1.102,71.793)
C6: (24.244,-7.094,69.166)
C5: (23.554,-5.903,69.455)
C4: (24.152,-5.039,70.352)
P: (18.990,-3.452,70.992)
C4': (21.832,-1.134,71.427)
C2': (24.143,-1.526,70.815)
C2: (25.880,-6.372,70.623)
N1: (25.427,-7.299,69.776)
N3: (25.325,-5.219,70.979)
N6: (23.793,-8.023,68.320)
N7: (22.348,-5.390,69.015)
N9: (23.303,-3.958,70.470)
O5': (19.600,-2.024,71.407)
O3': (23.258,0.775,71.225)
Image (generated by PyMOL):
PyMOL image
show in jmol