ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A409:A413

Extra

PDB:
ATOM 1 O3' C A 408 181.425 98.141 35.454 1.00159.15 O
ATOM 2 P C A 409 182.721 99.089 35.563 1.00200.59 P
ATOM 3 OP1 C A 409 183.815 98.290 36.173 1.00197.68 O
ATOM 4 OP2 C A 409 182.295 100.358 36.203 1.00197.68 O
ATOM 5 O5' C A 409 183.122 99.414 34.051 1.00200.59 O
ATOM 6 C5' C A 409 183.348 98.360 33.088 1.00200.59 C
ATOM 7 C4' C A 409 184.751 98.453 32.516 1.00200.59 C
ATOM 8 O4' C A 409 184.924 99.754 31.890 1.00200.59 O
ATOM 9 C3' C A 409 185.899 98.291 33.513 1.00200.59 C
ATOM 10 O3' C A 409 186.969 97.554 32.902 1.00200.59 O
ATOM 11 C2' C A 409 186.328 99.736 33.791 1.00200.59 C
ATOM 12 O2' C A 409 187.693 99.861 34.146 1.00200.59 O
ATOM 13 C1' C A 409 186.043 100.419 32.450 1.00200.59 C
ATOM 14 N1 C A 409 185.736 101.871 32.507 1.00197.68 N
ATOM 15 C2 C A 409 186.634 102.790 31.916 1.00197.68 C
ATOM 16 O2 C A 409 187.707 102.375 31.438 1.00197.68 O
ATOM 17 N3 C A 409 186.306 104.108 31.889 1.00197.68 N
ATOM 18 C4 C A 409 185.156 104.524 32.431 1.00197.68 C
ATOM 19 N4 C A 409 184.858 105.827 32.351 1.00197.68 N
ATOM 20 C5 C A 409 184.255 103.624 33.072 1.00197.68 C
ATOM 21 C6 C A 409 184.583 102.322 33.091 1.00197.68 C
ATOM 22 P U A 410 186.982 95.940 32.967 1.00200.59 P
ATOM 23 OP1 U A 410 186.379 95.453 31.697 1.00200.59 O
ATOM 24 OP2 U A 410 186.409 95.501 34.267 1.00200.59 O
ATOM 25 O5' U A 410 188.531 95.555 32.957 1.00200.59 O
TER

ATOM 1 O3' C B 412 193.358 93.072 37.991 1.00200.59 O
ATOM 2 P G B 413 192.724 94.259 38.886 1.00200.59 P
ATOM 3 OP1 G B 413 193.736 94.651 39.904 1.00200.59 O
ATOM 4 OP2 G B 413 191.366 93.838 39.325 1.00200.59 O
ATOM 5 O5' G B 413 192.570 95.479 37.865 1.00200.59 O
ATOM 6 C5' G B 413 191.446 96.393 37.940 1.00200.59 C
ATOM 7 C4' G B 413 191.807 97.721 37.304 1.00200.59 C
ATOM 8 O4' G B 413 192.429 97.480 36.018 1.00200.59 O
ATOM 9 C3' G B 413 190.650 98.675 37.015 1.00200.59 C
ATOM 10 O3' G B 413 190.349 99.505 38.145 1.00200.59 O
ATOM 11 C2' G B 413 191.180 99.516 35.853 1.00200.59 C
ATOM 12 O2' G B 413 191.930 100.638 36.277 1.00200.59 O
ATOM 13 C1' G B 413 192.105 98.531 35.127 1.00200.59 C
ATOM 14 N9 G B 413 191.599 97.952 33.881 1.00200.59 N
ATOM 15 C8 G B 413 190.473 98.322 33.179 1.00200.59 C
ATOM 16 N7 G B 413 190.290 97.619 32.093 1.00200.59 N
ATOM 17 C5 G B 413 191.356 96.727 32.075 1.00200.59 C
ATOM 18 C6 G B 413 191.690 95.710 31.139 1.00200.59 C
ATOM 19 O6 G B 413 191.088 95.381 30.108 1.00200.59 O
ATOM 20 N1 G B 413 192.856 95.044 31.504 1.00200.59 N
ATOM 21 C2 G B 413 193.605 95.315 32.623 1.00200.59 C
ATOM 22 N2 G B 413 194.698 94.563 32.799 1.00200.59 N
ATOM 23 N3 G B 413 193.304 96.256 33.504 1.00200.59 N
ATOM 24 C4 G B 413 192.174 96.919 33.170 1.00200.59 C
ATOM 25 P G B 414 188.874 99.484 38.799 1.00200.59 P
ATOM 26 OP1 G B 414 189.059 99.582 40.273 1.00200.59 O
ATOM 27 OP2 G B 414 188.142 98.325 38.229 1.00200.59 O
ATOM 28 O5' G B 414 188.167 100.824 38.286 1.00200.59 O
TER

Atoms:
C2: (186.634,102.790,31.916)
OP1: (183.815,98.290,36.173)
OP2: (182.295,100.358,36.203)
C4: (185.156,104.524,32.431)
O5': (183.122,99.414,34.051)
C3': (185.899,98.291,33.513)
C1': (186.043,100.419,32.450)
O4': (184.924,99.754,31.890)
C5': (183.348,98.360,33.088)
P: (182.721,99.089,35.563)
O2: (187.707,102.375,31.438)
C4': (184.751,98.453,32.516)
C2': (186.328,99.736,33.791)
O2': (187.693,99.861,34.146)
N1: (185.736,101.871,32.507)
N3: (186.306,104.108,31.889)
N4: (184.858,105.827,32.351)
C6: (184.583,102.322,33.091)
C5: (184.255,103.624,33.072)
O3': (186.969,97.554,32.902)
OP1: (193.736,94.651,39.904)
OP2: (191.366,93.838,39.325)
C3': (190.650,98.675,37.015)
C1': (192.105,98.531,35.127)
C5': (191.446,96.393,37.940)
O6: (191.088,95.381,30.108)
O4': (192.429,97.480,36.018)
C8: (190.473,98.322,33.179)
C2: (193.605,95.315,32.623)
C6: (191.690,95.710,31.139)
C5: (191.356,96.727,32.075)
C4: (192.174,96.919,33.170)
P: (192.724,94.259,38.886)
C4': (191.807,97.721,37.304)
C2': (191.180,99.516,35.853)
O2': (191.930,100.638,36.277)
N1: (192.856,95.044,31.504)
N2: (194.698,94.563,32.799)
N3: (193.304,96.256,33.504)
N7: (190.290,97.619,32.093)
N9: (191.599,97.952,33.881)
O5': (192.570,95.479,37.865)
O3': (190.349,99.505,38.145)
Image (generated by PyMOL):
PyMOL image
show in jmol