Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:X61:X62
Extra
PDB:
ATOM 1 O3' A A 60 -14.506 -18.708 14.775 1.00 28.19 O
ATOM 2 P U A 61 -15.884 -19.172 14.104 1.00 29.87 P
ATOM 3 OP1 U A 61 -16.964 -18.861 15.070 1.00 29.03 O
ATOM 4 OP2 U A 61 -15.745 -20.556 13.595 1.00 30.07 O
ATOM 5 O5' U A 61 -16.018 -18.172 12.862 1.00 29.24 O
ATOM 6 C5' U A 61 -16.260 -16.791 13.110 1.00 30.03 C
ATOM 7 C4' U A 61 -15.965 -15.955 11.878 1.00 31.16 C
ATOM 8 O4' U A 61 -14.591 -16.137 11.463 1.00 31.31 O
ATOM 9 C3' U A 61 -16.770 -16.326 10.644 1.00 31.97 C
ATOM 10 O3' U A 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 11 C2' U A 61 -15.911 -15.696 9.547 1.00 31.77 C
ATOM 12 O2' U A 61 -16.122 -14.306 9.386 1.00 33.42 O
ATOM 13 C1' U A 61 -14.497 -15.961 10.063 1.00 31.57 C
ATOM 14 N1 U A 61 -13.875 -17.172 9.452 1.00 31.24 N
ATOM 15 C2 U A 61 -13.020 -17.017 8.378 1.00 31.52 C
ATOM 16 O2 U A 61 -12.722 -15.934 7.907 1.00 33.96 O
ATOM 17 N3 U A 61 -12.514 -18.186 7.870 1.00 30.79 N
ATOM 18 C4 U A 61 -12.766 -19.468 8.320 1.00 31.09 C
ATOM 19 O4 U A 61 -12.234 -20.418 7.757 1.00 33.56 O
ATOM 20 C5 U A 61 -13.668 -19.553 9.440 1.00 31.01 C
ATOM 21 C6 U A 61 -14.179 -18.426 9.951 1.00 30.69 C
ATOM 22 P G A 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 23 OP1 G A 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 24 OP2 G A 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 25 O5' G A 62 -18.979 -15.914 8.441 1.00 32.08 O
TER
ATOM 1 O3' U B 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 2 P G B 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 3 OP1 G B 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 4 OP2 G B 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 5 O5' G B 62 -18.979 -15.914 8.441 1.00 32.08 O
ATOM 6 C5' G B 62 -19.735 -16.459 7.372 1.00 31.66 C
ATOM 7 C4' G B 62 -19.638 -15.563 6.153 1.00 32.62 C
ATOM 8 O4' G B 62 -20.389 -14.339 6.371 1.00 32.88 O
ATOM 9 C3' G B 62 -18.241 -15.047 5.853 1.00 32.86 C
ATOM 10 O3' G B 62 -17.457 -16.024 5.195 1.00 33.89 O
ATOM 11 C2' G B 62 -18.575 -13.899 4.917 1.00 32.85 C
ATOM 12 O2' G B 62 -18.932 -14.367 3.629 1.00 32.65 O
ATOM 13 C1' G B 62 -19.771 -13.288 5.645 1.00 33.49 C
ATOM 14 N9 G B 62 -19.371 -12.205 6.545 1.00 34.78 N
ATOM 15 C8 G B 62 -19.107 -12.258 7.897 1.00 34.91 C
ATOM 16 N7 G B 62 -18.752 -11.104 8.403 1.00 35.64 N
ATOM 17 C5 G B 62 -18.786 -10.231 7.320 1.00 34.62 C
ATOM 18 C6 G B 62 -18.507 -8.842 7.236 1.00 34.69 C
ATOM 19 O6 G B 62 -18.157 -8.068 8.137 1.00 35.27 O
ATOM 20 N1 G B 62 -18.658 -8.356 5.937 1.00 34.38 N
ATOM 21 C2 G B 62 -19.033 -9.117 4.854 1.00 34.43 C
ATOM 22 N2 G B 62 -19.130 -8.490 3.673 1.00 35.22 N
ATOM 23 N3 G B 62 -19.305 -10.411 4.922 1.00 34.57 N
ATOM 24 C4 G B 62 -19.158 -10.899 6.176 1.00 34.10 C
ATOM 25 P C B 63 -15.886 -15.779 4.999 1.00 33.13 P
ATOM 26 OP1 C B 63 -15.294 -15.512 6.328 1.00 35.23 O
ATOM 27 OP2 C B 63 -15.688 -14.820 3.895 1.00 32.87 O
ATOM 28 O5' C B 63 -15.441 -17.229 4.507 1.00 33.27 O
TER
ATOM 2 P U A 61 -15.884 -19.172 14.104 1.00 29.87 P
ATOM 3 OP1 U A 61 -16.964 -18.861 15.070 1.00 29.03 O
ATOM 4 OP2 U A 61 -15.745 -20.556 13.595 1.00 30.07 O
ATOM 5 O5' U A 61 -16.018 -18.172 12.862 1.00 29.24 O
ATOM 6 C5' U A 61 -16.260 -16.791 13.110 1.00 30.03 C
ATOM 7 C4' U A 61 -15.965 -15.955 11.878 1.00 31.16 C
ATOM 8 O4' U A 61 -14.591 -16.137 11.463 1.00 31.31 O
ATOM 9 C3' U A 61 -16.770 -16.326 10.644 1.00 31.97 C
ATOM 10 O3' U A 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 11 C2' U A 61 -15.911 -15.696 9.547 1.00 31.77 C
ATOM 12 O2' U A 61 -16.122 -14.306 9.386 1.00 33.42 O
ATOM 13 C1' U A 61 -14.497 -15.961 10.063 1.00 31.57 C
ATOM 14 N1 U A 61 -13.875 -17.172 9.452 1.00 31.24 N
ATOM 15 C2 U A 61 -13.020 -17.017 8.378 1.00 31.52 C
ATOM 16 O2 U A 61 -12.722 -15.934 7.907 1.00 33.96 O
ATOM 17 N3 U A 61 -12.514 -18.186 7.870 1.00 30.79 N
ATOM 18 C4 U A 61 -12.766 -19.468 8.320 1.00 31.09 C
ATOM 19 O4 U A 61 -12.234 -20.418 7.757 1.00 33.56 O
ATOM 20 C5 U A 61 -13.668 -19.553 9.440 1.00 31.01 C
ATOM 21 C6 U A 61 -14.179 -18.426 9.951 1.00 30.69 C
ATOM 22 P G A 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 23 OP1 G A 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 24 OP2 G A 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 25 O5' G A 62 -18.979 -15.914 8.441 1.00 32.08 O
TER
ATOM 1 O3' U B 61 -18.057 -15.736 10.753 1.00 32.25 O
ATOM 2 P G B 62 -19.327 -16.286 9.955 1.00 31.76 P
ATOM 3 OP1 G B 62 -20.480 -15.470 10.397 1.00 32.26 O
ATOM 4 OP2 G B 62 -19.382 -17.759 10.068 1.00 32.19 O
ATOM 5 O5' G B 62 -18.979 -15.914 8.441 1.00 32.08 O
ATOM 6 C5' G B 62 -19.735 -16.459 7.372 1.00 31.66 C
ATOM 7 C4' G B 62 -19.638 -15.563 6.153 1.00 32.62 C
ATOM 8 O4' G B 62 -20.389 -14.339 6.371 1.00 32.88 O
ATOM 9 C3' G B 62 -18.241 -15.047 5.853 1.00 32.86 C
ATOM 10 O3' G B 62 -17.457 -16.024 5.195 1.00 33.89 O
ATOM 11 C2' G B 62 -18.575 -13.899 4.917 1.00 32.85 C
ATOM 12 O2' G B 62 -18.932 -14.367 3.629 1.00 32.65 O
ATOM 13 C1' G B 62 -19.771 -13.288 5.645 1.00 33.49 C
ATOM 14 N9 G B 62 -19.371 -12.205 6.545 1.00 34.78 N
ATOM 15 C8 G B 62 -19.107 -12.258 7.897 1.00 34.91 C
ATOM 16 N7 G B 62 -18.752 -11.104 8.403 1.00 35.64 N
ATOM 17 C5 G B 62 -18.786 -10.231 7.320 1.00 34.62 C
ATOM 18 C6 G B 62 -18.507 -8.842 7.236 1.00 34.69 C
ATOM 19 O6 G B 62 -18.157 -8.068 8.137 1.00 35.27 O
ATOM 20 N1 G B 62 -18.658 -8.356 5.937 1.00 34.38 N
ATOM 21 C2 G B 62 -19.033 -9.117 4.854 1.00 34.43 C
ATOM 22 N2 G B 62 -19.130 -8.490 3.673 1.00 35.22 N
ATOM 23 N3 G B 62 -19.305 -10.411 4.922 1.00 34.57 N
ATOM 24 C4 G B 62 -19.158 -10.899 6.176 1.00 34.10 C
ATOM 25 P C B 63 -15.886 -15.779 4.999 1.00 33.13 P
ATOM 26 OP1 C B 63 -15.294 -15.512 6.328 1.00 35.23 O
ATOM 27 OP2 C B 63 -15.688 -14.820 3.895 1.00 32.87 O
ATOM 28 O5' C B 63 -15.441 -17.229 4.507 1.00 33.27 O
TER
Atoms:
C4: (-12.766,-19.468,8.320)
N3: (-12.514,-18.186,7.870)
OP1: (-16.964,-18.861,15.070)
OP2: (-15.745,-20.556,13.595)
C2: (-13.020,-17.017,8.378)
C1': (-14.497,-15.961,10.063)
C3': (-16.770,-16.326,10.644)
O5': (-16.018,-18.172,12.862)
O4': (-14.591,-16.137,11.463)
C5': (-16.260,-16.791,13.110)
P: (-15.884,-19.172,14.104)
C4': (-15.965,-15.955,11.878)
C2': (-15.911,-15.696,9.547)
O2': (-16.122,-14.306,9.386)
N1: (-13.875,-17.172,9.452)
O4: (-12.234,-20.418,7.757)
O2: (-12.722,-15.934,7.907)
C6: (-14.179,-18.426,9.951)
C5: (-13.668,-19.553,9.440)
O3': (-18.057,-15.736,10.753)
N3: (-12.514,-18.186,7.870)
OP1: (-16.964,-18.861,15.070)
OP2: (-15.745,-20.556,13.595)
C2: (-13.020,-17.017,8.378)
C1': (-14.497,-15.961,10.063)
C3': (-16.770,-16.326,10.644)
O5': (-16.018,-18.172,12.862)
O4': (-14.591,-16.137,11.463)
C5': (-16.260,-16.791,13.110)
P: (-15.884,-19.172,14.104)
C4': (-15.965,-15.955,11.878)
C2': (-15.911,-15.696,9.547)
O2': (-16.122,-14.306,9.386)
N1: (-13.875,-17.172,9.452)
O4: (-12.234,-20.418,7.757)
O2: (-12.722,-15.934,7.907)
C6: (-14.179,-18.426,9.951)
C5: (-13.668,-19.553,9.440)
O3': (-18.057,-15.736,10.753)
OP1: (-20.480,-15.470,10.397)
OP2: (-19.382,-17.759,10.068)
C3': (-18.241,-15.047,5.853)
C1': (-19.771,-13.288,5.645)
C5': (-19.735,-16.459,7.372)
O6: (-18.157,-8.068,8.137)
O4': (-20.389,-14.339,6.371)
C8: (-19.107,-12.258,7.897)
C2: (-19.033,-9.117,4.854)
C6: (-18.507,-8.842,7.236)
C5: (-18.786,-10.231,7.320)
C4: (-19.158,-10.899,6.176)
P: (-19.327,-16.286,9.955)
C4': (-19.638,-15.563,6.153)
C2': (-18.575,-13.899,4.917)
O2': (-18.932,-14.367,3.629)
N1: (-18.658,-8.356,5.937)
N2: (-19.130,-8.490,3.673)
N3: (-19.305,-10.411,4.922)
N7: (-18.752,-11.104,8.403)
N9: (-19.371,-12.205,6.545)
O5': (-18.979,-15.914,8.441)
O3': (-17.457,-16.024,5.195)
OP2: (-19.382,-17.759,10.068)
C3': (-18.241,-15.047,5.853)
C1': (-19.771,-13.288,5.645)
C5': (-19.735,-16.459,7.372)
O6: (-18.157,-8.068,8.137)
O4': (-20.389,-14.339,6.371)
C8: (-19.107,-12.258,7.897)
C2: (-19.033,-9.117,4.854)
C6: (-18.507,-8.842,7.236)
C5: (-18.786,-10.231,7.320)
C4: (-19.158,-10.899,6.176)
P: (-19.327,-16.286,9.955)
C4': (-19.638,-15.563,6.153)
C2': (-18.575,-13.899,4.917)
O2': (-18.932,-14.367,3.629)
N1: (-18.658,-8.356,5.937)
N2: (-19.130,-8.490,3.673)
N3: (-19.305,-10.411,4.922)
N7: (-18.752,-11.104,8.403)
N9: (-19.371,-12.205,6.545)
O5': (-18.979,-15.914,8.441)
O3': (-17.457,-16.024,5.195)
Image (generated by PyMOL):