Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U9S:A12:A13
Extra
PDB:
ATOM 1 O3' A A 11 -0.106 12.897 110.310 1.00105.26 O
ATOM 2 P C A 12 1.480 13.132 110.203 1.00107.62 P
ATOM 3 OP1 C A 12 2.139 12.137 111.084 1.00110.14 O
ATOM 4 OP2 C A 12 1.741 14.583 110.406 1.00108.58 O
ATOM 5 O5' C A 12 1.823 12.787 108.688 1.00106.83 O
ATOM 6 C5' C A 12 2.785 11.794 108.361 1.00108.45 C
ATOM 7 C4' C A 12 2.099 10.475 108.104 1.00112.80 C
ATOM 8 O4' C A 12 0.917 10.683 107.289 1.00114.71 O
ATOM 9 C3' C A 12 2.923 9.463 107.332 1.00115.42 C
ATOM 10 O3' C A 12 3.756 8.744 108.227 1.00120.44 O
ATOM 11 C2' C A 12 1.853 8.576 106.703 1.00114.89 C
ATOM 12 O2' C A 12 1.342 7.596 107.590 1.00114.85 O
ATOM 13 C1' C A 12 0.757 9.597 106.388 1.00112.76 C
ATOM 14 N1 C A 12 0.769 10.138 105.017 1.00108.27 N
ATOM 15 C2 C A 12 0.627 9.261 103.926 1.00107.34 C
ATOM 16 O2 C A 12 0.521 8.038 104.136 1.00104.08 O
ATOM 17 N3 C A 12 0.611 9.774 102.674 1.00105.73 N
ATOM 18 C4 C A 12 0.732 11.093 102.490 1.00103.70 C
ATOM 19 N4 C A 12 0.706 11.552 101.245 1.00102.63 N
ATOM 20 C5 C A 12 0.886 11.999 103.576 1.00101.93 C
ATOM 21 C6 C A 12 0.902 11.484 104.808 1.00105.35 C
ATOM 22 P G A 13 5.312 8.566 107.889 1.00125.96 P
ATOM 23 OP1 G A 13 5.956 7.950 109.079 1.00127.19 O
ATOM 24 OP2 G A 13 5.810 9.873 107.370 1.00119.76 O
ATOM 25 O5' G A 13 5.332 7.490 106.712 1.00129.58 O
TER
ATOM 1 O3' C B 12 3.756 8.744 108.227 1.00120.44 O
ATOM 2 P G B 13 5.312 8.566 107.889 1.00125.96 P
ATOM 3 OP1 G B 13 5.956 7.950 109.079 1.00127.19 O
ATOM 4 OP2 G B 13 5.810 9.873 107.370 1.00119.76 O
ATOM 5 O5' G B 13 5.332 7.490 106.712 1.00129.58 O
ATOM 6 C5' G B 13 6.536 7.216 106.002 1.00133.65 C
ATOM 7 C4' G B 13 6.794 5.728 105.943 1.00135.62 C
ATOM 8 O4' G B 13 6.621 5.174 107.278 1.00134.43 O
ATOM 9 C3' G B 13 5.830 4.919 105.084 1.00138.30 C
ATOM 10 O3' G B 13 6.246 4.914 103.717 1.00138.91 O
ATOM 11 C2' G B 13 5.937 3.529 105.698 1.00138.01 C
ATOM 12 O2' G B 13 7.046 2.774 105.250 1.00140.70 O
ATOM 13 C1' G B 13 6.100 3.861 107.179 1.00135.94 C
ATOM 14 N9 G B 13 4.837 3.781 107.897 1.00133.70 N
ATOM 15 C8 G B 13 4.256 4.725 108.704 1.00132.80 C
ATOM 16 N7 G B 13 3.119 4.330 109.210 1.00135.27 N
ATOM 17 C5 G B 13 2.943 3.048 108.701 1.00136.53 C
ATOM 18 C6 G B 13 1.885 2.102 108.894 1.00137.45 C
ATOM 19 O6 G B 13 0.858 2.214 109.577 1.00136.99 O
ATOM 20 N1 G B 13 2.116 0.926 108.187 1.00136.58 N
ATOM 21 C2 G B 13 3.214 0.682 107.396 1.00136.38 C
ATOM 22 N2 G B 13 3.257 -0.518 106.797 1.00133.66 N
ATOM 23 N3 G B 13 4.198 1.549 107.209 1.00135.87 N
ATOM 24 C4 G B 13 3.995 2.701 107.887 1.00135.42 C
ATOM 25 P C B 14 5.427 4.052 102.627 1.00140.79 P
ATOM 26 OP1 C B 14 4.996 2.757 103.224 1.00140.03 O
ATOM 27 OP2 C B 14 6.246 4.045 101.390 1.00140.98 O
ATOM 28 O5' C B 14 4.123 4.924 102.341 1.00136.04 O
TER
ATOM 2 P C A 12 1.480 13.132 110.203 1.00107.62 P
ATOM 3 OP1 C A 12 2.139 12.137 111.084 1.00110.14 O
ATOM 4 OP2 C A 12 1.741 14.583 110.406 1.00108.58 O
ATOM 5 O5' C A 12 1.823 12.787 108.688 1.00106.83 O
ATOM 6 C5' C A 12 2.785 11.794 108.361 1.00108.45 C
ATOM 7 C4' C A 12 2.099 10.475 108.104 1.00112.80 C
ATOM 8 O4' C A 12 0.917 10.683 107.289 1.00114.71 O
ATOM 9 C3' C A 12 2.923 9.463 107.332 1.00115.42 C
ATOM 10 O3' C A 12 3.756 8.744 108.227 1.00120.44 O
ATOM 11 C2' C A 12 1.853 8.576 106.703 1.00114.89 C
ATOM 12 O2' C A 12 1.342 7.596 107.590 1.00114.85 O
ATOM 13 C1' C A 12 0.757 9.597 106.388 1.00112.76 C
ATOM 14 N1 C A 12 0.769 10.138 105.017 1.00108.27 N
ATOM 15 C2 C A 12 0.627 9.261 103.926 1.00107.34 C
ATOM 16 O2 C A 12 0.521 8.038 104.136 1.00104.08 O
ATOM 17 N3 C A 12 0.611 9.774 102.674 1.00105.73 N
ATOM 18 C4 C A 12 0.732 11.093 102.490 1.00103.70 C
ATOM 19 N4 C A 12 0.706 11.552 101.245 1.00102.63 N
ATOM 20 C5 C A 12 0.886 11.999 103.576 1.00101.93 C
ATOM 21 C6 C A 12 0.902 11.484 104.808 1.00105.35 C
ATOM 22 P G A 13 5.312 8.566 107.889 1.00125.96 P
ATOM 23 OP1 G A 13 5.956 7.950 109.079 1.00127.19 O
ATOM 24 OP2 G A 13 5.810 9.873 107.370 1.00119.76 O
ATOM 25 O5' G A 13 5.332 7.490 106.712 1.00129.58 O
TER
ATOM 1 O3' C B 12 3.756 8.744 108.227 1.00120.44 O
ATOM 2 P G B 13 5.312 8.566 107.889 1.00125.96 P
ATOM 3 OP1 G B 13 5.956 7.950 109.079 1.00127.19 O
ATOM 4 OP2 G B 13 5.810 9.873 107.370 1.00119.76 O
ATOM 5 O5' G B 13 5.332 7.490 106.712 1.00129.58 O
ATOM 6 C5' G B 13 6.536 7.216 106.002 1.00133.65 C
ATOM 7 C4' G B 13 6.794 5.728 105.943 1.00135.62 C
ATOM 8 O4' G B 13 6.621 5.174 107.278 1.00134.43 O
ATOM 9 C3' G B 13 5.830 4.919 105.084 1.00138.30 C
ATOM 10 O3' G B 13 6.246 4.914 103.717 1.00138.91 O
ATOM 11 C2' G B 13 5.937 3.529 105.698 1.00138.01 C
ATOM 12 O2' G B 13 7.046 2.774 105.250 1.00140.70 O
ATOM 13 C1' G B 13 6.100 3.861 107.179 1.00135.94 C
ATOM 14 N9 G B 13 4.837 3.781 107.897 1.00133.70 N
ATOM 15 C8 G B 13 4.256 4.725 108.704 1.00132.80 C
ATOM 16 N7 G B 13 3.119 4.330 109.210 1.00135.27 N
ATOM 17 C5 G B 13 2.943 3.048 108.701 1.00136.53 C
ATOM 18 C6 G B 13 1.885 2.102 108.894 1.00137.45 C
ATOM 19 O6 G B 13 0.858 2.214 109.577 1.00136.99 O
ATOM 20 N1 G B 13 2.116 0.926 108.187 1.00136.58 N
ATOM 21 C2 G B 13 3.214 0.682 107.396 1.00136.38 C
ATOM 22 N2 G B 13 3.257 -0.518 106.797 1.00133.66 N
ATOM 23 N3 G B 13 4.198 1.549 107.209 1.00135.87 N
ATOM 24 C4 G B 13 3.995 2.701 107.887 1.00135.42 C
ATOM 25 P C B 14 5.427 4.052 102.627 1.00140.79 P
ATOM 26 OP1 C B 14 4.996 2.757 103.224 1.00140.03 O
ATOM 27 OP2 C B 14 6.246 4.045 101.390 1.00140.98 O
ATOM 28 O5' C B 14 4.123 4.924 102.341 1.00136.04 O
TER
Atoms:
C2: (0.627,9.261,103.926)
OP1: (2.139,12.137,111.084)
OP2: (1.741,14.583,110.406)
C4: (0.732,11.093,102.490)
O5': (1.823,12.787,108.688)
C3': (2.923,9.463,107.332)
C1': (0.757,9.597,106.388)
O4': (0.917,10.683,107.289)
C5': (2.785,11.794,108.361)
P: (1.480,13.132,110.203)
O2: (0.521,8.038,104.136)
C4': (2.099,10.475,108.104)
C2': (1.853,8.576,106.703)
O2': (1.342,7.596,107.590)
N1: (0.769,10.138,105.017)
N3: (0.611,9.774,102.674)
N4: (0.706,11.552,101.245)
C6: (0.902,11.484,104.808)
C5: (0.886,11.999,103.576)
O3': (3.756,8.744,108.227)
OP1: (2.139,12.137,111.084)
OP2: (1.741,14.583,110.406)
C4: (0.732,11.093,102.490)
O5': (1.823,12.787,108.688)
C3': (2.923,9.463,107.332)
C1': (0.757,9.597,106.388)
O4': (0.917,10.683,107.289)
C5': (2.785,11.794,108.361)
P: (1.480,13.132,110.203)
O2: (0.521,8.038,104.136)
C4': (2.099,10.475,108.104)
C2': (1.853,8.576,106.703)
O2': (1.342,7.596,107.590)
N1: (0.769,10.138,105.017)
N3: (0.611,9.774,102.674)
N4: (0.706,11.552,101.245)
C6: (0.902,11.484,104.808)
C5: (0.886,11.999,103.576)
O3': (3.756,8.744,108.227)
OP1: (5.956,7.950,109.079)
OP2: (5.810,9.873,107.370)
C3': (5.830,4.919,105.084)
C1': (6.100,3.861,107.179)
C5': (6.536,7.216,106.002)
O6: (0.858,2.214,109.577)
O4': (6.621,5.174,107.278)
C8: (4.256,4.725,108.704)
C2: (3.214,0.682,107.396)
C6: (1.885,2.102,108.894)
C5: (2.943,3.048,108.701)
C4: (3.995,2.701,107.887)
P: (5.312,8.566,107.889)
C4': (6.794,5.728,105.943)
C2': (5.937,3.529,105.698)
O2': (7.046,2.774,105.250)
N1: (2.116,0.926,108.187)
N2: (3.257,-0.518,106.797)
N3: (4.198,1.549,107.209)
N7: (3.119,4.330,109.210)
N9: (4.837,3.781,107.897)
O5': (5.332,7.490,106.712)
O3': (6.246,4.914,103.717)
OP2: (5.810,9.873,107.370)
C3': (5.830,4.919,105.084)
C1': (6.100,3.861,107.179)
C5': (6.536,7.216,106.002)
O6: (0.858,2.214,109.577)
O4': (6.621,5.174,107.278)
C8: (4.256,4.725,108.704)
C2: (3.214,0.682,107.396)
C6: (1.885,2.102,108.894)
C5: (2.943,3.048,108.701)
C4: (3.995,2.701,107.887)
P: (5.312,8.566,107.889)
C4': (6.794,5.728,105.943)
C2': (5.937,3.529,105.698)
O2': (7.046,2.774,105.250)
N1: (2.116,0.926,108.187)
N2: (3.257,-0.518,106.797)
N3: (4.198,1.549,107.209)
N7: (3.119,4.330,109.210)
N9: (4.837,3.781,107.897)
O5': (5.332,7.490,106.712)
O3': (6.246,4.914,103.717)
Image (generated by PyMOL):