Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1425:A1436
Extra
PDB:
ATOM 1 O3' A A1424 95.239 136.337 31.722 1.00 51.58 O
ATOM 2 P C A1425 94.921 134.766 31.820 1.00 51.23 P
ATOM 3 OP1 C A1425 95.094 134.242 30.436 1.00 51.17 O
ATOM 4 OP2 C A1425 93.622 134.597 32.516 1.00 50.22 O
ATOM 5 O5' C A1425 96.091 134.168 32.733 1.00 50.18 O
ATOM 6 C5' C A1425 97.469 134.241 32.291 1.00 50.12 C
ATOM 7 C4' C A1425 98.444 133.893 33.408 1.00 51.21 C
ATOM 8 O4' C A1425 98.391 134.871 34.476 1.00 52.71 O
ATOM 9 C3' C A1425 98.238 132.583 34.139 1.00 52.60 C
ATOM 10 O3' C A1425 98.687 131.481 33.377 1.00 53.85 O
ATOM 11 C2' C A1425 99.041 132.783 35.420 1.00 51.46 C
ATOM 12 O2' C A1425 100.430 132.609 35.262 1.00 50.70 O
ATOM 13 C1' C A1425 98.752 134.252 35.714 1.00 51.89 C
ATOM 14 N1 C A1425 97.642 134.416 36.675 1.00 52.64 N
ATOM 15 C2 C A1425 97.899 134.258 38.053 1.00 52.98 C
ATOM 16 O2 C A1425 99.050 134.002 38.434 1.00 52.24 O
ATOM 17 N3 C A1425 96.882 134.391 38.928 1.00 54.02 N
ATOM 18 C4 C A1425 95.652 134.670 38.490 1.00 53.94 C
ATOM 19 N4 C A1425 94.675 134.767 39.398 1.00 53.92 N
ATOM 20 C5 C A1425 95.367 134.852 37.108 1.00 52.66 C
ATOM 21 C6 C A1425 96.378 134.713 36.242 1.00 52.45 C
ATOM 22 P C A1426 97.756 130.186 33.264 1.00 53.81 P
ATOM 23 OP1 C A1426 98.347 129.226 32.285 1.00 54.08 O
ATOM 24 OP2 C A1426 96.367 130.694 33.076 1.00 54.11 O
ATOM 25 O5' C A1426 97.889 129.514 34.694 1.00 51.67 O
TER
ATOM 1 O3' A B1435 99.112 134.837 50.034 1.00 69.55 O
ATOM 2 P C B1436 99.622 136.258 49.467 1.00 70.57 P
ATOM 3 OP1 C B1436 100.441 136.798 50.582 1.00 71.61 O
ATOM 4 OP2 C B1436 98.476 137.057 48.948 1.00 70.93 O
ATOM 5 O5' C B1436 100.607 135.890 48.264 1.00 67.23 O
ATOM 6 C5' C B1436 101.865 135.236 48.542 1.00 63.43 C
ATOM 7 C4' C B1436 102.584 134.897 47.266 1.00 61.17 C
ATOM 8 O4' C B1436 101.701 134.138 46.409 1.00 60.51 O
ATOM 9 C3' C B1436 102.904 136.078 46.368 1.00 60.80 C
ATOM 10 O3' C B1436 104.033 136.802 46.840 1.00 61.44 O
ATOM 11 C2' C B1436 103.191 135.393 45.038 1.00 59.42 C
ATOM 12 O2' C B1436 104.505 134.883 44.936 1.00 57.89 O
ATOM 13 C1' C B1436 102.186 134.234 45.078 1.00 59.35 C
ATOM 14 N1 C B1436 101.064 134.403 44.130 1.00 57.78 N
ATOM 15 C2 C B1436 101.315 134.167 42.777 1.00 57.61 C
ATOM 16 O2 C B1436 102.444 133.761 42.444 1.00 59.33 O
ATOM 17 N3 C B1436 100.340 134.388 41.868 1.00 56.50 N
ATOM 18 C4 C B1436 99.146 134.829 42.272 1.00 56.50 C
ATOM 19 N4 C B1436 98.217 135.094 41.337 1.00 56.22 N
ATOM 20 C5 C B1436 98.848 135.035 43.653 1.00 56.72 C
ATOM 21 C6 C B1436 99.825 134.807 44.540 1.00 56.79 C
ATOM 22 P U B1437 104.259 138.327 46.373 1.00 61.76 P
ATOM 23 OP1 U B1437 105.549 138.761 46.959 1.00 62.76 O
ATOM 24 OP2 U B1437 103.036 139.147 46.609 1.00 62.05 O
ATOM 25 O5' U B1437 104.459 138.190 44.807 1.00 60.35 O
TER
ATOM 2 P C A1425 94.921 134.766 31.820 1.00 51.23 P
ATOM 3 OP1 C A1425 95.094 134.242 30.436 1.00 51.17 O
ATOM 4 OP2 C A1425 93.622 134.597 32.516 1.00 50.22 O
ATOM 5 O5' C A1425 96.091 134.168 32.733 1.00 50.18 O
ATOM 6 C5' C A1425 97.469 134.241 32.291 1.00 50.12 C
ATOM 7 C4' C A1425 98.444 133.893 33.408 1.00 51.21 C
ATOM 8 O4' C A1425 98.391 134.871 34.476 1.00 52.71 O
ATOM 9 C3' C A1425 98.238 132.583 34.139 1.00 52.60 C
ATOM 10 O3' C A1425 98.687 131.481 33.377 1.00 53.85 O
ATOM 11 C2' C A1425 99.041 132.783 35.420 1.00 51.46 C
ATOM 12 O2' C A1425 100.430 132.609 35.262 1.00 50.70 O
ATOM 13 C1' C A1425 98.752 134.252 35.714 1.00 51.89 C
ATOM 14 N1 C A1425 97.642 134.416 36.675 1.00 52.64 N
ATOM 15 C2 C A1425 97.899 134.258 38.053 1.00 52.98 C
ATOM 16 O2 C A1425 99.050 134.002 38.434 1.00 52.24 O
ATOM 17 N3 C A1425 96.882 134.391 38.928 1.00 54.02 N
ATOM 18 C4 C A1425 95.652 134.670 38.490 1.00 53.94 C
ATOM 19 N4 C A1425 94.675 134.767 39.398 1.00 53.92 N
ATOM 20 C5 C A1425 95.367 134.852 37.108 1.00 52.66 C
ATOM 21 C6 C A1425 96.378 134.713 36.242 1.00 52.45 C
ATOM 22 P C A1426 97.756 130.186 33.264 1.00 53.81 P
ATOM 23 OP1 C A1426 98.347 129.226 32.285 1.00 54.08 O
ATOM 24 OP2 C A1426 96.367 130.694 33.076 1.00 54.11 O
ATOM 25 O5' C A1426 97.889 129.514 34.694 1.00 51.67 O
TER
ATOM 1 O3' A B1435 99.112 134.837 50.034 1.00 69.55 O
ATOM 2 P C B1436 99.622 136.258 49.467 1.00 70.57 P
ATOM 3 OP1 C B1436 100.441 136.798 50.582 1.00 71.61 O
ATOM 4 OP2 C B1436 98.476 137.057 48.948 1.00 70.93 O
ATOM 5 O5' C B1436 100.607 135.890 48.264 1.00 67.23 O
ATOM 6 C5' C B1436 101.865 135.236 48.542 1.00 63.43 C
ATOM 7 C4' C B1436 102.584 134.897 47.266 1.00 61.17 C
ATOM 8 O4' C B1436 101.701 134.138 46.409 1.00 60.51 O
ATOM 9 C3' C B1436 102.904 136.078 46.368 1.00 60.80 C
ATOM 10 O3' C B1436 104.033 136.802 46.840 1.00 61.44 O
ATOM 11 C2' C B1436 103.191 135.393 45.038 1.00 59.42 C
ATOM 12 O2' C B1436 104.505 134.883 44.936 1.00 57.89 O
ATOM 13 C1' C B1436 102.186 134.234 45.078 1.00 59.35 C
ATOM 14 N1 C B1436 101.064 134.403 44.130 1.00 57.78 N
ATOM 15 C2 C B1436 101.315 134.167 42.777 1.00 57.61 C
ATOM 16 O2 C B1436 102.444 133.761 42.444 1.00 59.33 O
ATOM 17 N3 C B1436 100.340 134.388 41.868 1.00 56.50 N
ATOM 18 C4 C B1436 99.146 134.829 42.272 1.00 56.50 C
ATOM 19 N4 C B1436 98.217 135.094 41.337 1.00 56.22 N
ATOM 20 C5 C B1436 98.848 135.035 43.653 1.00 56.72 C
ATOM 21 C6 C B1436 99.825 134.807 44.540 1.00 56.79 C
ATOM 22 P U B1437 104.259 138.327 46.373 1.00 61.76 P
ATOM 23 OP1 U B1437 105.549 138.761 46.959 1.00 62.76 O
ATOM 24 OP2 U B1437 103.036 139.147 46.609 1.00 62.05 O
ATOM 25 O5' U B1437 104.459 138.190 44.807 1.00 60.35 O
TER
Atoms:
C2: (97.899,134.258,38.053)
OP1: (95.094,134.242,30.436)
OP2: (93.622,134.597,32.516)
C4: (95.652,134.670,38.490)
O5': (96.091,134.168,32.733)
C3': (98.238,132.583,34.139)
C1': (98.752,134.252,35.714)
O4': (98.391,134.871,34.476)
C5': (97.469,134.241,32.291)
P: (94.921,134.766,31.820)
O2: (99.050,134.002,38.434)
C4': (98.444,133.893,33.408)
C2': (99.041,132.783,35.420)
O2': (100.430,132.609,35.262)
N1: (97.642,134.416,36.675)
N3: (96.882,134.391,38.928)
N4: (94.675,134.767,39.398)
C6: (96.378,134.713,36.242)
C5: (95.367,134.852,37.108)
O3': (98.687,131.481,33.377)
OP1: (95.094,134.242,30.436)
OP2: (93.622,134.597,32.516)
C4: (95.652,134.670,38.490)
O5': (96.091,134.168,32.733)
C3': (98.238,132.583,34.139)
C1': (98.752,134.252,35.714)
O4': (98.391,134.871,34.476)
C5': (97.469,134.241,32.291)
P: (94.921,134.766,31.820)
O2: (99.050,134.002,38.434)
C4': (98.444,133.893,33.408)
C2': (99.041,132.783,35.420)
O2': (100.430,132.609,35.262)
N1: (97.642,134.416,36.675)
N3: (96.882,134.391,38.928)
N4: (94.675,134.767,39.398)
C6: (96.378,134.713,36.242)
C5: (95.367,134.852,37.108)
O3': (98.687,131.481,33.377)
C2: (101.315,134.167,42.777)
OP1: (100.441,136.798,50.582)
OP2: (98.476,137.057,48.948)
C4: (99.146,134.829,42.272)
O5': (100.607,135.890,48.264)
C3': (102.904,136.078,46.368)
C1': (102.186,134.234,45.078)
O4': (101.701,134.138,46.409)
C5': (101.865,135.236,48.542)
P: (99.622,136.258,49.467)
O2: (102.444,133.761,42.444)
C4': (102.584,134.897,47.266)
C2': (103.191,135.393,45.038)
O2': (104.505,134.883,44.936)
N1: (101.064,134.403,44.130)
N3: (100.340,134.388,41.868)
N4: (98.217,135.094,41.337)
C6: (99.825,134.807,44.540)
C5: (98.848,135.035,43.653)
O3': (104.033,136.802,46.840)
OP1: (100.441,136.798,50.582)
OP2: (98.476,137.057,48.948)
C4: (99.146,134.829,42.272)
O5': (100.607,135.890,48.264)
C3': (102.904,136.078,46.368)
C1': (102.186,134.234,45.078)
O4': (101.701,134.138,46.409)
C5': (101.865,135.236,48.542)
P: (99.622,136.258,49.467)
O2: (102.444,133.761,42.444)
C4': (102.584,134.897,47.266)
C2': (103.191,135.393,45.038)
O2': (104.505,134.883,44.936)
N1: (101.064,134.403,44.130)
N3: (100.340,134.388,41.868)
N4: (98.217,135.094,41.337)
C6: (99.825,134.807,44.540)
C5: (98.848,135.035,43.653)
O3': (104.033,136.802,46.840)
Image (generated by PyMOL):