Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.426 98.763 121.794 1.00 92.94 O
ATOM 2 P C A 559 -4.869 97.726 122.935 1.00 94.94 P
ATOM 3 OP1 C A 559 -4.244 98.178 124.204 1.00 95.90 O
ATOM 4 OP2 C A 559 -4.617 96.350 122.443 1.00 93.96 O
ATOM 5 O5' C A 559 -6.443 97.945 123.048 1.00 97.08 O
ATOM 6 C5' C A 559 -6.990 99.216 123.470 1.00100.49 C
ATOM 7 C4' C A 559 -8.499 99.181 123.394 1.00102.55 C
ATOM 8 O4' C A 559 -8.888 98.902 122.025 1.00101.69 O
ATOM 9 C3' C A 559 -9.157 98.086 124.221 1.00103.65 C
ATOM 10 O3' C A 559 -9.388 98.543 125.554 1.00105.53 O
ATOM 11 C2' C A 559 -10.454 97.828 123.464 1.00103.03 C
ATOM 12 O2' C A 559 -11.466 98.765 123.779 1.00103.70 O
ATOM 13 C1' C A 559 -10.007 98.039 122.013 1.00101.63 C
ATOM 14 N1 C A 559 -9.617 96.812 121.308 1.00100.32 N
ATOM 15 C2 C A 559 -10.580 96.134 120.563 1.00100.51 C
ATOM 16 O2 C A 559 -11.733 96.584 120.528 1.00100.69 O
ATOM 17 N3 C A 559 -10.233 95.007 119.899 1.00100.61 N
ATOM 18 C4 C A 559 -8.978 94.556 119.963 1.00100.17 C
ATOM 19 N4 C A 559 -8.680 93.441 119.287 1.00 99.71 N
ATOM 20 C5 C A 559 -7.974 95.228 120.720 1.00 99.89 C
ATOM 21 C6 C A 559 -8.335 96.342 121.371 1.00 99.81 C
ATOM 22 P G A 560 -9.153 97.553 126.796 1.00107.19 P
ATOM 23 OP1 G A 560 -9.538 98.309 128.013 1.00106.48 O
ATOM 24 OP2 G A 560 -7.785 96.993 126.690 1.00107.03 O
ATOM 25 O5' G A 560 -10.215 96.381 126.572 1.00109.22 O
TER
ATOM 1 O3' C B 573 -10.512 83.862 116.314 1.00 82.69 O
ATOM 2 P C B 574 -10.530 84.493 114.844 1.00 83.59 P
ATOM 3 OP1 C B 574 -11.561 83.761 114.067 1.00 83.54 O
ATOM 4 OP2 C B 574 -9.132 84.517 114.355 1.00 84.65 O
ATOM 5 O5' C B 574 -11.049 85.984 115.068 1.00 81.49 O
ATOM 6 C5' C B 574 -12.449 86.247 115.181 1.00 81.59 C
ATOM 7 C4' C B 574 -12.682 87.540 115.909 1.00 82.89 C
ATOM 8 O4' C B 574 -11.809 87.580 117.060 1.00 83.18 O
ATOM 9 C3' C B 574 -12.349 88.811 115.154 1.00 83.83 C
ATOM 10 O3' C B 574 -13.451 89.210 114.350 1.00 86.23 O
ATOM 11 C2' C B 574 -12.119 89.810 116.279 1.00 84.38 C
ATOM 12 O2' C B 574 -13.319 90.365 116.783 1.00 84.00 O
ATOM 13 C1' C B 574 -11.462 88.924 117.340 1.00 84.90 C
ATOM 14 N1 C B 574 -9.997 89.020 117.388 1.00 86.71 N
ATOM 15 C2 C B 574 -9.408 90.144 117.993 1.00 86.63 C
ATOM 16 O2 C B 574 -10.139 91.050 118.428 1.00 85.92 O
ATOM 17 N3 C B 574 -8.060 90.213 118.078 1.00 86.51 N
ATOM 18 C4 C B 574 -7.308 89.229 117.573 1.00 87.33 C
ATOM 19 N4 C B 574 -5.984 89.335 117.685 1.00 88.51 N
ATOM 20 C5 C B 574 -7.881 88.091 116.931 1.00 87.09 C
ATOM 21 C6 C B 574 -9.215 88.027 116.864 1.00 86.96 C
ATOM 22 P A B 575 -13.190 89.952 112.953 1.00 88.37 P
ATOM 23 OP1 A B 575 -12.632 91.308 113.228 1.00 87.76 O
ATOM 24 OP2 A B 575 -14.412 89.821 112.118 1.00 88.46 O
ATOM 25 O5' A B 575 -12.065 89.054 112.286 1.00 86.94 O
TER
ATOM 2 P C A 559 -4.869 97.726 122.935 1.00 94.94 P
ATOM 3 OP1 C A 559 -4.244 98.178 124.204 1.00 95.90 O
ATOM 4 OP2 C A 559 -4.617 96.350 122.443 1.00 93.96 O
ATOM 5 O5' C A 559 -6.443 97.945 123.048 1.00 97.08 O
ATOM 6 C5' C A 559 -6.990 99.216 123.470 1.00100.49 C
ATOM 7 C4' C A 559 -8.499 99.181 123.394 1.00102.55 C
ATOM 8 O4' C A 559 -8.888 98.902 122.025 1.00101.69 O
ATOM 9 C3' C A 559 -9.157 98.086 124.221 1.00103.65 C
ATOM 10 O3' C A 559 -9.388 98.543 125.554 1.00105.53 O
ATOM 11 C2' C A 559 -10.454 97.828 123.464 1.00103.03 C
ATOM 12 O2' C A 559 -11.466 98.765 123.779 1.00103.70 O
ATOM 13 C1' C A 559 -10.007 98.039 122.013 1.00101.63 C
ATOM 14 N1 C A 559 -9.617 96.812 121.308 1.00100.32 N
ATOM 15 C2 C A 559 -10.580 96.134 120.563 1.00100.51 C
ATOM 16 O2 C A 559 -11.733 96.584 120.528 1.00100.69 O
ATOM 17 N3 C A 559 -10.233 95.007 119.899 1.00100.61 N
ATOM 18 C4 C A 559 -8.978 94.556 119.963 1.00100.17 C
ATOM 19 N4 C A 559 -8.680 93.441 119.287 1.00 99.71 N
ATOM 20 C5 C A 559 -7.974 95.228 120.720 1.00 99.89 C
ATOM 21 C6 C A 559 -8.335 96.342 121.371 1.00 99.81 C
ATOM 22 P G A 560 -9.153 97.553 126.796 1.00107.19 P
ATOM 23 OP1 G A 560 -9.538 98.309 128.013 1.00106.48 O
ATOM 24 OP2 G A 560 -7.785 96.993 126.690 1.00107.03 O
ATOM 25 O5' G A 560 -10.215 96.381 126.572 1.00109.22 O
TER
ATOM 1 O3' C B 573 -10.512 83.862 116.314 1.00 82.69 O
ATOM 2 P C B 574 -10.530 84.493 114.844 1.00 83.59 P
ATOM 3 OP1 C B 574 -11.561 83.761 114.067 1.00 83.54 O
ATOM 4 OP2 C B 574 -9.132 84.517 114.355 1.00 84.65 O
ATOM 5 O5' C B 574 -11.049 85.984 115.068 1.00 81.49 O
ATOM 6 C5' C B 574 -12.449 86.247 115.181 1.00 81.59 C
ATOM 7 C4' C B 574 -12.682 87.540 115.909 1.00 82.89 C
ATOM 8 O4' C B 574 -11.809 87.580 117.060 1.00 83.18 O
ATOM 9 C3' C B 574 -12.349 88.811 115.154 1.00 83.83 C
ATOM 10 O3' C B 574 -13.451 89.210 114.350 1.00 86.23 O
ATOM 11 C2' C B 574 -12.119 89.810 116.279 1.00 84.38 C
ATOM 12 O2' C B 574 -13.319 90.365 116.783 1.00 84.00 O
ATOM 13 C1' C B 574 -11.462 88.924 117.340 1.00 84.90 C
ATOM 14 N1 C B 574 -9.997 89.020 117.388 1.00 86.71 N
ATOM 15 C2 C B 574 -9.408 90.144 117.993 1.00 86.63 C
ATOM 16 O2 C B 574 -10.139 91.050 118.428 1.00 85.92 O
ATOM 17 N3 C B 574 -8.060 90.213 118.078 1.00 86.51 N
ATOM 18 C4 C B 574 -7.308 89.229 117.573 1.00 87.33 C
ATOM 19 N4 C B 574 -5.984 89.335 117.685 1.00 88.51 N
ATOM 20 C5 C B 574 -7.881 88.091 116.931 1.00 87.09 C
ATOM 21 C6 C B 574 -9.215 88.027 116.864 1.00 86.96 C
ATOM 22 P A B 575 -13.190 89.952 112.953 1.00 88.37 P
ATOM 23 OP1 A B 575 -12.632 91.308 113.228 1.00 87.76 O
ATOM 24 OP2 A B 575 -14.412 89.821 112.118 1.00 88.46 O
ATOM 25 O5' A B 575 -12.065 89.054 112.286 1.00 86.94 O
TER
Atoms:
C2: (-10.580,96.134,120.563)
OP1: (-4.244,98.178,124.204)
OP2: (-4.617,96.350,122.443)
C4: (-8.978,94.556,119.963)
O5': (-6.443,97.945,123.048)
C3': (-9.157,98.086,124.221)
C1': (-10.007,98.039,122.013)
O4': (-8.888,98.902,122.025)
C5': (-6.990,99.216,123.470)
P: (-4.869,97.726,122.935)
O2: (-11.733,96.584,120.528)
C4': (-8.499,99.181,123.394)
C2': (-10.454,97.828,123.464)
O2': (-11.466,98.765,123.779)
N1: (-9.617,96.812,121.308)
N3: (-10.233,95.007,119.899)
N4: (-8.680,93.441,119.287)
C6: (-8.335,96.342,121.371)
C5: (-7.974,95.228,120.720)
O3': (-9.388,98.543,125.554)
OP1: (-4.244,98.178,124.204)
OP2: (-4.617,96.350,122.443)
C4: (-8.978,94.556,119.963)
O5': (-6.443,97.945,123.048)
C3': (-9.157,98.086,124.221)
C1': (-10.007,98.039,122.013)
O4': (-8.888,98.902,122.025)
C5': (-6.990,99.216,123.470)
P: (-4.869,97.726,122.935)
O2: (-11.733,96.584,120.528)
C4': (-8.499,99.181,123.394)
C2': (-10.454,97.828,123.464)
O2': (-11.466,98.765,123.779)
N1: (-9.617,96.812,121.308)
N3: (-10.233,95.007,119.899)
N4: (-8.680,93.441,119.287)
C6: (-8.335,96.342,121.371)
C5: (-7.974,95.228,120.720)
O3': (-9.388,98.543,125.554)
C2: (-9.408,90.144,117.993)
OP1: (-11.561,83.761,114.067)
OP2: (-9.132,84.517,114.355)
C4: (-7.308,89.229,117.573)
O5': (-11.049,85.984,115.068)
C3': (-12.349,88.811,115.154)
C1': (-11.462,88.924,117.340)
O4': (-11.809,87.580,117.060)
C5': (-12.449,86.247,115.181)
P: (-10.530,84.493,114.844)
O2: (-10.139,91.050,118.428)
C4': (-12.682,87.540,115.909)
C2': (-12.119,89.810,116.279)
O2': (-13.319,90.365,116.783)
N1: (-9.997,89.020,117.388)
N3: (-8.060,90.213,118.078)
N4: (-5.984,89.335,117.685)
C6: (-9.215,88.027,116.864)
C5: (-7.881,88.091,116.931)
O3': (-13.451,89.210,114.350)
OP1: (-11.561,83.761,114.067)
OP2: (-9.132,84.517,114.355)
C4: (-7.308,89.229,117.573)
O5': (-11.049,85.984,115.068)
C3': (-12.349,88.811,115.154)
C1': (-11.462,88.924,117.340)
O4': (-11.809,87.580,117.060)
C5': (-12.449,86.247,115.181)
P: (-10.530,84.493,114.844)
O2: (-10.139,91.050,118.428)
C4': (-12.682,87.540,115.909)
C2': (-12.119,89.810,116.279)
O2': (-13.319,90.365,116.783)
N1: (-9.997,89.020,117.388)
N3: (-8.060,90.213,118.078)
N4: (-5.984,89.335,117.685)
C6: (-9.215,88.027,116.864)
C5: (-7.881,88.091,116.931)
O3': (-13.451,89.210,114.350)
Image (generated by PyMOL):