Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HOO:A54:A52
Extra
PDB:
ATOM 1 O3' U A 53 -1.585 16.514 37.998 1.00113.66 O
ATOM 2 P C A 54 -2.143 17.797 38.801 1.00118.05 P
ATOM 3 OP1 C A 54 -1.962 19.000 37.944 1.00118.67 O
ATOM 4 OP2 C A 54 -1.530 17.763 40.155 1.00115.49 O
ATOM 5 O5' C A 54 -3.714 17.544 38.926 1.00115.62 O
ATOM 6 C5' C A 54 -4.263 16.930 40.082 1.00113.40 C
ATOM 7 C4' C A 54 -5.728 17.263 40.211 1.00113.47 C
ATOM 8 O4' C A 54 -6.201 16.686 41.461 1.00114.70 O
ATOM 9 C3' C A 54 -6.036 18.750 40.321 1.00114.32 C
ATOM 10 O3' C A 54 -6.262 19.347 39.047 1.00115.32 O
ATOM 11 C2' C A 54 -7.287 18.756 41.187 1.00114.66 C
ATOM 12 O2' C A 54 -8.458 18.449 40.455 1.00115.32 O
ATOM 13 C1' C A 54 -6.948 17.647 42.188 1.00114.53 C
ATOM 14 N1 C A 54 -6.087 18.141 43.284 1.00115.81 N
ATOM 15 C2 C A 54 -6.683 18.734 44.432 1.00116.43 C
ATOM 16 O2 C A 54 -7.931 18.779 44.524 1.00116.79 O
ATOM 17 N3 C A 54 -5.876 19.238 45.400 1.00112.66 N
ATOM 18 C4 C A 54 -4.544 19.166 45.267 1.00112.02 C
ATOM 19 N4 C A 54 -3.787 19.693 46.235 1.00113.22 N
ATOM 20 C5 C A 54 -3.925 18.553 44.134 1.00109.59 C
ATOM 21 C6 C A 54 -4.722 18.055 43.184 1.00110.91 C
ATOM 22 P U A 55 -5.946 20.910 38.832 1.00115.75 P
ATOM 23 OP1 U A 55 -6.375 21.300 37.470 1.00116.40 O
ATOM 24 OP2 U A 55 -4.542 21.146 39.256 1.00115.09 O
ATOM 25 O5' U A 55 -6.894 21.647 39.877 1.00117.73 O
TER
ATOM 1 O3' G B 51 -6.487 11.458 44.442 1.00 91.69 O
ATOM 2 P A B 52 -5.768 11.454 42.993 1.00 98.58 P
ATOM 3 OP1 A B 52 -6.715 12.087 42.034 1.00 95.56 O
ATOM 4 OP2 A B 52 -5.282 10.065 42.738 1.00 98.04 O
ATOM 5 O5' A B 52 -4.497 12.418 43.116 1.00100.08 O
ATOM 6 C5' A B 52 -3.789 12.845 41.943 1.00 98.78 C
ATOM 7 C4' A B 52 -2.493 13.544 42.314 1.00101.45 C
ATOM 8 O4' A B 52 -2.803 14.767 43.036 1.00102.08 O
ATOM 9 C3' A B 52 -1.628 12.708 43.253 1.00103.11 C
ATOM 10 O3' A B 52 -0.253 12.513 42.891 1.00103.40 O
ATOM 11 C2' A B 52 -1.894 13.239 44.663 1.00102.75 C
ATOM 12 O2' A B 52 -0.702 13.390 45.406 1.00105.06 O
ATOM 13 C1' A B 52 -2.416 14.652 44.392 1.00101.18 C
ATOM 14 N9 A B 52 -3.526 15.068 45.243 1.00 99.66 N
ATOM 15 C8 A B 52 -4.844 14.697 45.157 1.00 98.88 C
ATOM 16 N7 A B 52 -5.603 15.231 46.081 1.00 98.43 N
ATOM 17 C5 A B 52 -4.727 16.010 46.826 1.00 94.93 C
ATOM 18 C6 A B 52 -4.914 16.828 47.954 1.00 93.85 C
ATOM 19 N6 A B 52 -6.093 17.000 48.559 1.00 97.20 N
ATOM 20 N1 A B 52 -3.835 17.469 48.448 1.00 90.13 N
ATOM 21 C2 A B 52 -2.659 17.289 47.847 1.00 88.66 C
ATOM 22 N3 A B 52 -2.356 16.544 46.788 1.00 89.23 N
ATOM 23 C4 A B 52 -3.448 15.922 46.318 1.00 94.70 C
ATOM 24 P U B 53 0.151 12.189 41.370 1.00101.29 P
ATOM 25 OP1 U B 53 -0.699 11.082 40.869 1.00102.62 O
ATOM 26 OP2 U B 53 1.629 12.052 41.342 1.00101.79 O
ATOM 27 O5' U B 53 -0.247 13.517 40.582 1.00102.04 O
TER
ATOM 2 P C A 54 -2.143 17.797 38.801 1.00118.05 P
ATOM 3 OP1 C A 54 -1.962 19.000 37.944 1.00118.67 O
ATOM 4 OP2 C A 54 -1.530 17.763 40.155 1.00115.49 O
ATOM 5 O5' C A 54 -3.714 17.544 38.926 1.00115.62 O
ATOM 6 C5' C A 54 -4.263 16.930 40.082 1.00113.40 C
ATOM 7 C4' C A 54 -5.728 17.263 40.211 1.00113.47 C
ATOM 8 O4' C A 54 -6.201 16.686 41.461 1.00114.70 O
ATOM 9 C3' C A 54 -6.036 18.750 40.321 1.00114.32 C
ATOM 10 O3' C A 54 -6.262 19.347 39.047 1.00115.32 O
ATOM 11 C2' C A 54 -7.287 18.756 41.187 1.00114.66 C
ATOM 12 O2' C A 54 -8.458 18.449 40.455 1.00115.32 O
ATOM 13 C1' C A 54 -6.948 17.647 42.188 1.00114.53 C
ATOM 14 N1 C A 54 -6.087 18.141 43.284 1.00115.81 N
ATOM 15 C2 C A 54 -6.683 18.734 44.432 1.00116.43 C
ATOM 16 O2 C A 54 -7.931 18.779 44.524 1.00116.79 O
ATOM 17 N3 C A 54 -5.876 19.238 45.400 1.00112.66 N
ATOM 18 C4 C A 54 -4.544 19.166 45.267 1.00112.02 C
ATOM 19 N4 C A 54 -3.787 19.693 46.235 1.00113.22 N
ATOM 20 C5 C A 54 -3.925 18.553 44.134 1.00109.59 C
ATOM 21 C6 C A 54 -4.722 18.055 43.184 1.00110.91 C
ATOM 22 P U A 55 -5.946 20.910 38.832 1.00115.75 P
ATOM 23 OP1 U A 55 -6.375 21.300 37.470 1.00116.40 O
ATOM 24 OP2 U A 55 -4.542 21.146 39.256 1.00115.09 O
ATOM 25 O5' U A 55 -6.894 21.647 39.877 1.00117.73 O
TER
ATOM 1 O3' G B 51 -6.487 11.458 44.442 1.00 91.69 O
ATOM 2 P A B 52 -5.768 11.454 42.993 1.00 98.58 P
ATOM 3 OP1 A B 52 -6.715 12.087 42.034 1.00 95.56 O
ATOM 4 OP2 A B 52 -5.282 10.065 42.738 1.00 98.04 O
ATOM 5 O5' A B 52 -4.497 12.418 43.116 1.00100.08 O
ATOM 6 C5' A B 52 -3.789 12.845 41.943 1.00 98.78 C
ATOM 7 C4' A B 52 -2.493 13.544 42.314 1.00101.45 C
ATOM 8 O4' A B 52 -2.803 14.767 43.036 1.00102.08 O
ATOM 9 C3' A B 52 -1.628 12.708 43.253 1.00103.11 C
ATOM 10 O3' A B 52 -0.253 12.513 42.891 1.00103.40 O
ATOM 11 C2' A B 52 -1.894 13.239 44.663 1.00102.75 C
ATOM 12 O2' A B 52 -0.702 13.390 45.406 1.00105.06 O
ATOM 13 C1' A B 52 -2.416 14.652 44.392 1.00101.18 C
ATOM 14 N9 A B 52 -3.526 15.068 45.243 1.00 99.66 N
ATOM 15 C8 A B 52 -4.844 14.697 45.157 1.00 98.88 C
ATOM 16 N7 A B 52 -5.603 15.231 46.081 1.00 98.43 N
ATOM 17 C5 A B 52 -4.727 16.010 46.826 1.00 94.93 C
ATOM 18 C6 A B 52 -4.914 16.828 47.954 1.00 93.85 C
ATOM 19 N6 A B 52 -6.093 17.000 48.559 1.00 97.20 N
ATOM 20 N1 A B 52 -3.835 17.469 48.448 1.00 90.13 N
ATOM 21 C2 A B 52 -2.659 17.289 47.847 1.00 88.66 C
ATOM 22 N3 A B 52 -2.356 16.544 46.788 1.00 89.23 N
ATOM 23 C4 A B 52 -3.448 15.922 46.318 1.00 94.70 C
ATOM 24 P U B 53 0.151 12.189 41.370 1.00101.29 P
ATOM 25 OP1 U B 53 -0.699 11.082 40.869 1.00102.62 O
ATOM 26 OP2 U B 53 1.629 12.052 41.342 1.00101.79 O
ATOM 27 O5' U B 53 -0.247 13.517 40.582 1.00102.04 O
TER
Atoms:
C2: (-6.683,18.734,44.432)
OP1: (-1.962,19.000,37.944)
OP2: (-1.530,17.763,40.155)
C4: (-4.544,19.166,45.267)
O5': (-3.714,17.544,38.926)
C3': (-6.036,18.750,40.321)
C1': (-6.948,17.647,42.188)
O4': (-6.201,16.686,41.461)
C5': (-4.263,16.930,40.082)
P: (-2.143,17.797,38.801)
O2: (-7.931,18.779,44.524)
C4': (-5.728,17.263,40.211)
C2': (-7.287,18.756,41.187)
O2': (-8.458,18.449,40.455)
N1: (-6.087,18.141,43.284)
N3: (-5.876,19.238,45.400)
N4: (-3.787,19.693,46.235)
C6: (-4.722,18.055,43.184)
C5: (-3.925,18.553,44.134)
O3': (-6.262,19.347,39.047)
OP1: (-1.962,19.000,37.944)
OP2: (-1.530,17.763,40.155)
C4: (-4.544,19.166,45.267)
O5': (-3.714,17.544,38.926)
C3': (-6.036,18.750,40.321)
C1': (-6.948,17.647,42.188)
O4': (-6.201,16.686,41.461)
C5': (-4.263,16.930,40.082)
P: (-2.143,17.797,38.801)
O2: (-7.931,18.779,44.524)
C4': (-5.728,17.263,40.211)
C2': (-7.287,18.756,41.187)
O2': (-8.458,18.449,40.455)
N1: (-6.087,18.141,43.284)
N3: (-5.876,19.238,45.400)
N4: (-3.787,19.693,46.235)
C6: (-4.722,18.055,43.184)
C5: (-3.925,18.553,44.134)
O3': (-6.262,19.347,39.047)
OP1: (-6.715,12.087,42.034)
OP2: (-5.282,10.065,42.738)
C3': (-1.628,12.708,43.253)
C1': (-2.416,14.652,44.392)
C5': (-3.789,12.845,41.943)
O4': (-2.803,14.767,43.036)
C8: (-4.844,14.697,45.157)
O2': (-0.702,13.390,45.406)
C6: (-4.914,16.828,47.954)
C5: (-4.727,16.010,46.826)
C4: (-3.448,15.922,46.318)
P: (-5.768,11.454,42.993)
C4': (-2.493,13.544,42.314)
C2': (-1.894,13.239,44.663)
C2: (-2.659,17.289,47.847)
N1: (-3.835,17.469,48.448)
N3: (-2.356,16.544,46.788)
N6: (-6.093,17.000,48.559)
N7: (-5.603,15.231,46.081)
N9: (-3.526,15.068,45.243)
O5': (-4.497,12.418,43.116)
O3': (-0.253,12.513,42.891)
OP2: (-5.282,10.065,42.738)
C3': (-1.628,12.708,43.253)
C1': (-2.416,14.652,44.392)
C5': (-3.789,12.845,41.943)
O4': (-2.803,14.767,43.036)
C8: (-4.844,14.697,45.157)
O2': (-0.702,13.390,45.406)
C6: (-4.914,16.828,47.954)
C5: (-4.727,16.010,46.826)
C4: (-3.448,15.922,46.318)
P: (-5.768,11.454,42.993)
C4': (-2.493,13.544,42.314)
C2': (-1.894,13.239,44.663)
C2: (-2.659,17.289,47.847)
N1: (-3.835,17.469,48.448)
N3: (-2.356,16.544,46.788)
N6: (-6.093,17.000,48.559)
N7: (-5.603,15.231,46.081)
N9: (-3.526,15.068,45.243)
O5': (-4.497,12.418,43.116)
O3': (-0.253,12.513,42.891)
Image (generated by PyMOL):