Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2334:A2337
Extra
PDB:
ATOM 1 O3' U A2333 58.694 99.976 116.612 1.00 41.77 O
ATOM 2 P C A2334 58.590 100.132 118.198 1.00 42.90 P
ATOM 3 OP1 C A2334 58.172 98.816 118.718 1.00 39.63 O
ATOM 4 OP2 C A2334 57.798 101.352 118.534 1.00 41.92 O
ATOM 5 O5' C A2334 60.103 100.368 118.604 1.00 42.86 O
ATOM 6 C5' C A2334 61.079 99.371 118.311 1.00 42.82 C
ATOM 7 C4' C A2334 62.448 99.898 118.620 1.00 43.42 C
ATOM 8 O4' C A2334 62.678 101.073 117.797 1.00 43.60 O
ATOM 9 C3' C A2334 62.655 100.360 120.065 1.00 42.94 C
ATOM 10 O3' C A2334 64.004 100.160 120.423 1.00 43.07 O
ATOM 11 C2' C A2334 62.507 101.868 119.959 1.00 43.14 C
ATOM 12 O2' C A2334 63.209 102.585 120.961 1.00 41.95 O
ATOM 13 C1' C A2334 63.175 102.095 118.614 1.00 43.97 C
ATOM 14 N1 C A2334 62.967 103.410 117.988 1.00 44.95 N
ATOM 15 C2 C A2334 61.667 103.964 117.894 1.00 45.43 C
ATOM 16 O2 C A2334 60.680 103.285 118.246 1.00 45.04 O
ATOM 17 N3 C A2334 61.532 105.219 117.414 1.00 44.49 N
ATOM 18 C4 C A2334 62.611 105.905 117.027 1.00 44.07 C
ATOM 19 N4 C A2334 62.438 107.154 116.619 1.00 43.77 N
ATOM 20 C5 C A2334 63.917 105.346 117.055 1.00 44.24 C
ATOM 21 C6 C A2334 64.049 104.111 117.533 1.00 45.45 C
ATOM 22 P G A2335 64.438 98.842 121.217 1.00 43.80 P
ATOM 23 OP1 G A2335 63.459 97.782 120.914 1.00 43.51 O
ATOM 24 OP2 G A2335 64.743 99.171 122.639 1.00 43.32 O
ATOM 25 O5' G A2335 65.790 98.451 120.481 1.00 41.55 O
TER
ATOM 1 O3' U B2336 73.311 102.327 121.842 1.00 44.66 O
ATOM 2 P C B2337 73.333 102.850 123.371 1.00 44.92 P
ATOM 3 OP1 C B2337 74.721 103.163 123.812 1.00 44.85 O
ATOM 4 OP2 C B2337 72.490 101.937 124.176 1.00 44.10 O
ATOM 5 O5' C B2337 72.627 104.268 123.285 1.00 46.19 O
ATOM 6 C5' C B2337 73.321 105.390 122.717 1.00 44.93 C
ATOM 7 C4' C B2337 72.438 106.604 122.757 1.00 44.59 C
ATOM 8 O4' C B2337 71.286 106.362 121.916 1.00 45.04 O
ATOM 9 C3' C B2337 71.831 106.932 124.111 1.00 43.84 C
ATOM 10 O3' C B2337 72.716 107.659 124.951 1.00 43.98 O
ATOM 11 C2' C B2337 70.628 107.761 123.713 1.00 43.97 C
ATOM 12 O2' C B2337 71.036 109.050 123.317 1.00 44.03 O
ATOM 13 C1' C B2337 70.153 107.001 122.476 1.00 44.80 C
ATOM 14 N1 C B2337 69.128 105.978 122.754 1.00 44.85 N
ATOM 15 C2 C B2337 67.814 106.393 122.914 1.00 45.03 C
ATOM 16 O2 C B2337 67.563 107.600 122.851 1.00 46.53 O
ATOM 17 N3 C B2337 66.847 105.478 123.137 1.00 45.62 N
ATOM 18 C4 C B2337 67.157 104.179 123.200 1.00 46.21 C
ATOM 19 N4 C B2337 66.166 103.300 123.392 1.00 45.12 N
ATOM 20 C5 C B2337 68.499 103.721 123.060 1.00 46.76 C
ATOM 21 C6 C B2337 69.448 104.649 122.844 1.00 45.67 C
ATOM 22 P A B2338 72.672 107.425 126.544 1.00 46.51 P
ATOM 23 OP1 A B2338 73.868 108.068 127.142 1.00 45.07 O
ATOM 24 OP2 A B2338 72.405 105.989 126.799 1.00 45.40 O
ATOM 25 O5' A B2338 71.377 108.209 127.034 1.00 45.53 O
TER
ATOM 2 P C A2334 58.590 100.132 118.198 1.00 42.90 P
ATOM 3 OP1 C A2334 58.172 98.816 118.718 1.00 39.63 O
ATOM 4 OP2 C A2334 57.798 101.352 118.534 1.00 41.92 O
ATOM 5 O5' C A2334 60.103 100.368 118.604 1.00 42.86 O
ATOM 6 C5' C A2334 61.079 99.371 118.311 1.00 42.82 C
ATOM 7 C4' C A2334 62.448 99.898 118.620 1.00 43.42 C
ATOM 8 O4' C A2334 62.678 101.073 117.797 1.00 43.60 O
ATOM 9 C3' C A2334 62.655 100.360 120.065 1.00 42.94 C
ATOM 10 O3' C A2334 64.004 100.160 120.423 1.00 43.07 O
ATOM 11 C2' C A2334 62.507 101.868 119.959 1.00 43.14 C
ATOM 12 O2' C A2334 63.209 102.585 120.961 1.00 41.95 O
ATOM 13 C1' C A2334 63.175 102.095 118.614 1.00 43.97 C
ATOM 14 N1 C A2334 62.967 103.410 117.988 1.00 44.95 N
ATOM 15 C2 C A2334 61.667 103.964 117.894 1.00 45.43 C
ATOM 16 O2 C A2334 60.680 103.285 118.246 1.00 45.04 O
ATOM 17 N3 C A2334 61.532 105.219 117.414 1.00 44.49 N
ATOM 18 C4 C A2334 62.611 105.905 117.027 1.00 44.07 C
ATOM 19 N4 C A2334 62.438 107.154 116.619 1.00 43.77 N
ATOM 20 C5 C A2334 63.917 105.346 117.055 1.00 44.24 C
ATOM 21 C6 C A2334 64.049 104.111 117.533 1.00 45.45 C
ATOM 22 P G A2335 64.438 98.842 121.217 1.00 43.80 P
ATOM 23 OP1 G A2335 63.459 97.782 120.914 1.00 43.51 O
ATOM 24 OP2 G A2335 64.743 99.171 122.639 1.00 43.32 O
ATOM 25 O5' G A2335 65.790 98.451 120.481 1.00 41.55 O
TER
ATOM 1 O3' U B2336 73.311 102.327 121.842 1.00 44.66 O
ATOM 2 P C B2337 73.333 102.850 123.371 1.00 44.92 P
ATOM 3 OP1 C B2337 74.721 103.163 123.812 1.00 44.85 O
ATOM 4 OP2 C B2337 72.490 101.937 124.176 1.00 44.10 O
ATOM 5 O5' C B2337 72.627 104.268 123.285 1.00 46.19 O
ATOM 6 C5' C B2337 73.321 105.390 122.717 1.00 44.93 C
ATOM 7 C4' C B2337 72.438 106.604 122.757 1.00 44.59 C
ATOM 8 O4' C B2337 71.286 106.362 121.916 1.00 45.04 O
ATOM 9 C3' C B2337 71.831 106.932 124.111 1.00 43.84 C
ATOM 10 O3' C B2337 72.716 107.659 124.951 1.00 43.98 O
ATOM 11 C2' C B2337 70.628 107.761 123.713 1.00 43.97 C
ATOM 12 O2' C B2337 71.036 109.050 123.317 1.00 44.03 O
ATOM 13 C1' C B2337 70.153 107.001 122.476 1.00 44.80 C
ATOM 14 N1 C B2337 69.128 105.978 122.754 1.00 44.85 N
ATOM 15 C2 C B2337 67.814 106.393 122.914 1.00 45.03 C
ATOM 16 O2 C B2337 67.563 107.600 122.851 1.00 46.53 O
ATOM 17 N3 C B2337 66.847 105.478 123.137 1.00 45.62 N
ATOM 18 C4 C B2337 67.157 104.179 123.200 1.00 46.21 C
ATOM 19 N4 C B2337 66.166 103.300 123.392 1.00 45.12 N
ATOM 20 C5 C B2337 68.499 103.721 123.060 1.00 46.76 C
ATOM 21 C6 C B2337 69.448 104.649 122.844 1.00 45.67 C
ATOM 22 P A B2338 72.672 107.425 126.544 1.00 46.51 P
ATOM 23 OP1 A B2338 73.868 108.068 127.142 1.00 45.07 O
ATOM 24 OP2 A B2338 72.405 105.989 126.799 1.00 45.40 O
ATOM 25 O5' A B2338 71.377 108.209 127.034 1.00 45.53 O
TER
Atoms:
C2: (61.667,103.964,117.894)
OP1: (58.172,98.816,118.718)
OP2: (57.798,101.352,118.534)
C4: (62.611,105.905,117.027)
O5': (60.103,100.368,118.604)
C3': (62.655,100.360,120.065)
C1': (63.175,102.095,118.614)
O4': (62.678,101.073,117.797)
C5': (61.079,99.371,118.311)
P: (58.590,100.132,118.198)
O2: (60.680,103.285,118.246)
C4': (62.448,99.898,118.620)
C2': (62.507,101.868,119.959)
O2': (63.209,102.585,120.961)
N1: (62.967,103.410,117.988)
N3: (61.532,105.219,117.414)
N4: (62.438,107.154,116.619)
C6: (64.049,104.111,117.533)
C5: (63.917,105.346,117.055)
O3': (64.004,100.160,120.423)
OP1: (58.172,98.816,118.718)
OP2: (57.798,101.352,118.534)
C4: (62.611,105.905,117.027)
O5': (60.103,100.368,118.604)
C3': (62.655,100.360,120.065)
C1': (63.175,102.095,118.614)
O4': (62.678,101.073,117.797)
C5': (61.079,99.371,118.311)
P: (58.590,100.132,118.198)
O2: (60.680,103.285,118.246)
C4': (62.448,99.898,118.620)
C2': (62.507,101.868,119.959)
O2': (63.209,102.585,120.961)
N1: (62.967,103.410,117.988)
N3: (61.532,105.219,117.414)
N4: (62.438,107.154,116.619)
C6: (64.049,104.111,117.533)
C5: (63.917,105.346,117.055)
O3': (64.004,100.160,120.423)
C2: (67.814,106.393,122.914)
OP1: (74.721,103.163,123.812)
OP2: (72.490,101.937,124.176)
C4: (67.157,104.179,123.200)
O5': (72.627,104.268,123.285)
C3': (71.831,106.932,124.111)
C1': (70.153,107.001,122.476)
O4': (71.286,106.362,121.916)
C5': (73.321,105.390,122.717)
P: (73.333,102.850,123.371)
O2: (67.563,107.600,122.851)
C4': (72.438,106.604,122.757)
C2': (70.628,107.761,123.713)
O2': (71.036,109.050,123.317)
N1: (69.128,105.978,122.754)
N3: (66.847,105.478,123.137)
N4: (66.166,103.300,123.392)
C6: (69.448,104.649,122.844)
C5: (68.499,103.721,123.060)
O3': (72.716,107.659,124.951)
OP1: (74.721,103.163,123.812)
OP2: (72.490,101.937,124.176)
C4: (67.157,104.179,123.200)
O5': (72.627,104.268,123.285)
C3': (71.831,106.932,124.111)
C1': (70.153,107.001,122.476)
O4': (71.286,106.362,121.916)
C5': (73.321,105.390,122.717)
P: (73.333,102.850,123.371)
O2: (67.563,107.600,122.851)
C4': (72.438,106.604,122.757)
C2': (70.628,107.761,123.713)
O2': (71.036,109.050,123.317)
N1: (69.128,105.978,122.754)
N3: (66.847,105.478,123.137)
N4: (66.166,103.300,123.392)
C6: (69.448,104.649,122.844)
C5: (68.499,103.721,123.060)
O3': (72.716,107.659,124.951)
Image (generated by PyMOL):