Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02334:02337
Extra
PDB:
ATOM 1 O3' U A2333 58.636 99.874 116.124 1.00 38.45 O
ATOM 2 P C A2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C A2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C A2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C A2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C A2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C A2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C A2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C A2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C A2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C A2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C A2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C A2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C A2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C A2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C A2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C A2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C A2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C A2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C A2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C A2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G A2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G A2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G A2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G A2335 65.689 98.292 120.030 1.00 45.43 O
TER
ATOM 1 O3' U B2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 2 P C B2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 3 OP1 C B2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 4 OP2 C B2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 5 O5' C B2337 72.437 104.204 122.831 1.00 45.38 O
ATOM 6 C5' C B2337 73.112 105.315 122.214 1.00 46.26 C
ATOM 7 C4' C B2337 72.253 106.550 122.292 1.00 47.25 C
ATOM 8 O4' C B2337 71.087 106.384 121.445 1.00 47.65 O
ATOM 9 C3' C B2337 71.674 106.839 123.665 1.00 46.85 C
ATOM 10 O3' C B2337 72.613 107.478 124.514 1.00 48.04 O
ATOM 11 C2' C B2337 70.461 107.694 123.331 1.00 46.01 C
ATOM 12 O2' C B2337 70.787 109.033 123.031 1.00 44.45 O
ATOM 13 C1' C B2337 69.966 107.010 122.055 1.00 46.33 C
ATOM 14 N1 C B2337 68.923 105.990 122.293 1.00 43.79 N
ATOM 15 C2 C B2337 67.601 106.406 122.421 1.00 42.10 C
ATOM 16 O2 C B2337 67.343 107.615 122.352 1.00 44.83 O
ATOM 17 N3 C B2337 66.634 105.488 122.615 1.00 42.26 N
ATOM 18 C4 C B2337 66.945 104.196 122.685 1.00 41.65 C
ATOM 19 N4 C B2337 65.950 103.324 122.862 1.00 39.66 N
ATOM 20 C5 C B2337 68.289 103.739 122.572 1.00 42.62 C
ATOM 21 C6 C B2337 69.238 104.661 122.380 1.00 43.33 C
ATOM 22 P A B2338 72.556 107.211 126.096 1.00 50.84 P
ATOM 23 OP1 A B2338 73.725 107.912 126.696 1.00 50.72 O
ATOM 24 OP2 A B2338 72.375 105.756 126.340 1.00 49.01 O
ATOM 25 O5' A B2338 71.231 107.974 126.544 1.00 46.89 O
TER
ATOM 2 P C A2334 58.555 99.990 117.727 1.00 40.08 P
ATOM 3 OP1 C A2334 58.110 98.660 118.222 1.00 37.35 O
ATOM 4 OP2 C A2334 57.788 101.210 118.093 1.00 36.65 O
ATOM 5 O5' C A2334 60.068 100.200 118.172 1.00 40.18 O
ATOM 6 C5' C A2334 61.093 99.287 117.743 1.00 39.61 C
ATOM 7 C4' C A2334 62.453 99.844 118.074 1.00 41.28 C
ATOM 8 O4' C A2334 62.729 100.999 117.221 1.00 42.75 O
ATOM 9 C3' C A2334 62.607 100.335 119.518 1.00 41.73 C
ATOM 10 O3' C A2334 63.924 100.055 119.973 1.00 43.55 O
ATOM 11 C2' C A2334 62.468 101.845 119.357 1.00 41.92 C
ATOM 12 O2' C A2334 63.048 102.627 120.386 1.00 40.14 O
ATOM 13 C1' C A2334 63.201 102.043 118.033 1.00 41.66 C
ATOM 14 N1 C A2334 63.016 103.351 117.377 1.00 41.89 N
ATOM 15 C2 C A2334 61.732 103.951 117.322 1.00 42.94 C
ATOM 16 O2 C A2334 60.725 103.285 117.639 1.00 41.11 O
ATOM 17 N3 C A2334 61.634 105.242 116.912 1.00 42.44 N
ATOM 18 C4 C A2334 62.733 105.909 116.537 1.00 42.47 C
ATOM 19 N4 C A2334 62.613 107.207 116.244 1.00 42.59 N
ATOM 20 C5 C A2334 64.012 105.283 116.471 1.00 41.81 C
ATOM 21 C6 C A2334 64.105 104.017 116.892 1.00 41.76 C
ATOM 22 P G A2335 64.258 98.633 120.640 1.00 44.37 P
ATOM 23 OP1 G A2335 63.281 97.637 120.131 1.00 43.77 O
ATOM 24 OP2 G A2335 64.411 98.835 122.109 1.00 44.16 O
ATOM 25 O5' G A2335 65.689 98.292 120.030 1.00 45.43 O
TER
ATOM 1 O3' U B2336 73.179 102.270 121.405 1.00 44.08 O
ATOM 2 P C B2337 73.141 102.780 122.933 1.00 45.99 P
ATOM 3 OP1 C B2337 74.546 102.998 123.366 1.00 44.41 O
ATOM 4 OP2 C B2337 72.256 101.888 123.734 1.00 44.54 O
ATOM 5 O5' C B2337 72.437 104.204 122.831 1.00 45.38 O
ATOM 6 C5' C B2337 73.112 105.315 122.214 1.00 46.26 C
ATOM 7 C4' C B2337 72.253 106.550 122.292 1.00 47.25 C
ATOM 8 O4' C B2337 71.087 106.384 121.445 1.00 47.65 O
ATOM 9 C3' C B2337 71.674 106.839 123.665 1.00 46.85 C
ATOM 10 O3' C B2337 72.613 107.478 124.514 1.00 48.04 O
ATOM 11 C2' C B2337 70.461 107.694 123.331 1.00 46.01 C
ATOM 12 O2' C B2337 70.787 109.033 123.031 1.00 44.45 O
ATOM 13 C1' C B2337 69.966 107.010 122.055 1.00 46.33 C
ATOM 14 N1 C B2337 68.923 105.990 122.293 1.00 43.79 N
ATOM 15 C2 C B2337 67.601 106.406 122.421 1.00 42.10 C
ATOM 16 O2 C B2337 67.343 107.615 122.352 1.00 44.83 O
ATOM 17 N3 C B2337 66.634 105.488 122.615 1.00 42.26 N
ATOM 18 C4 C B2337 66.945 104.196 122.685 1.00 41.65 C
ATOM 19 N4 C B2337 65.950 103.324 122.862 1.00 39.66 N
ATOM 20 C5 C B2337 68.289 103.739 122.572 1.00 42.62 C
ATOM 21 C6 C B2337 69.238 104.661 122.380 1.00 43.33 C
ATOM 22 P A B2338 72.556 107.211 126.096 1.00 50.84 P
ATOM 23 OP1 A B2338 73.725 107.912 126.696 1.00 50.72 O
ATOM 24 OP2 A B2338 72.375 105.756 126.340 1.00 49.01 O
ATOM 25 O5' A B2338 71.231 107.974 126.544 1.00 46.89 O
TER
Atoms:
C2: (61.732,103.951,117.322)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
OP1: (58.110,98.660,118.222)
OP2: (57.788,101.210,118.093)
C4: (62.733,105.909,116.537)
O5': (60.068,100.200,118.172)
C3': (62.607,100.335,119.518)
C1': (63.201,102.043,118.033)
O4': (62.729,100.999,117.221)
C5': (61.093,99.287,117.743)
P: (58.555,99.990,117.727)
O2: (60.725,103.285,117.639)
C4': (62.453,99.844,118.074)
C2': (62.468,101.845,119.357)
O2': (63.048,102.627,120.386)
N1: (63.016,103.351,117.377)
N3: (61.634,105.242,116.912)
N4: (62.613,107.207,116.244)
C6: (64.105,104.017,116.892)
C5: (64.012,105.283,116.471)
O3': (63.924,100.055,119.973)
C2: (67.601,106.406,122.421)
OP1: (74.546,102.998,123.366)
OP2: (72.256,101.888,123.734)
C4: (66.945,104.196,122.685)
O5': (72.437,104.204,122.831)
C3': (71.674,106.839,123.665)
C1': (69.966,107.010,122.055)
O4': (71.087,106.384,121.445)
C5': (73.112,105.315,122.214)
P: (73.141,102.780,122.933)
O2: (67.343,107.615,122.352)
C4': (72.253,106.550,122.292)
C2': (70.461,107.694,123.331)
O2': (70.787,109.033,123.031)
N1: (68.923,105.990,122.293)
N3: (66.634,105.488,122.615)
N4: (65.950,103.324,122.862)
C6: (69.238,104.661,122.380)
C5: (68.289,103.739,122.572)
O3': (72.613,107.478,124.514)
OP1: (74.546,102.998,123.366)
OP2: (72.256,101.888,123.734)
C4: (66.945,104.196,122.685)
O5': (72.437,104.204,122.831)
C3': (71.674,106.839,123.665)
C1': (69.966,107.010,122.055)
O4': (71.087,106.384,121.445)
C5': (73.112,105.315,122.214)
P: (73.141,102.780,122.933)
O2: (67.343,107.615,122.352)
C4': (72.253,106.550,122.292)
C2': (70.461,107.694,123.331)
O2': (70.787,109.033,123.031)
N1: (68.923,105.990,122.293)
N3: (66.634,105.488,122.615)
N4: (65.950,103.324,122.862)
C6: (69.238,104.661,122.380)
C5: (68.289,103.739,122.572)
O3': (72.613,107.478,124.514)
Image (generated by PyMOL):