Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02334:02337
Extra
PDB:
ATOM 1 O3' U A2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C A2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C A2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C A2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C A2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C A2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C A2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C A2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C A2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C A2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C A2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C A2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C A2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C A2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C A2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C A2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C A2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C A2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C A2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C A2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C A2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G A2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G A2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G A2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G A2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 1 O3' U B2336 73.398 102.396 121.794 1.00 45.43 O
ATOM 2 P C B2337 73.404 102.966 123.300 1.00 47.57 P
ATOM 3 OP1 C B2337 74.819 103.243 123.655 1.00 45.57 O
ATOM 4 OP2 C B2337 72.572 102.093 124.177 1.00 43.61 O
ATOM 5 O5' C B2337 72.666 104.372 123.186 1.00 48.35 O
ATOM 6 C5' C B2337 73.322 105.506 122.595 1.00 48.13 C
ATOM 7 C4' C B2337 72.429 106.721 122.684 1.00 49.01 C
ATOM 8 O4' C B2337 71.258 106.522 121.854 1.00 48.84 O
ATOM 9 C3' C B2337 71.858 107.013 124.060 1.00 48.24 C
ATOM 10 O3' C B2337 72.783 107.703 124.883 1.00 49.25 O
ATOM 11 C2' C B2337 70.625 107.839 123.733 1.00 47.04 C
ATOM 12 O2' C B2337 70.934 109.183 123.443 1.00 44.54 O
ATOM 13 C1' C B2337 70.136 107.141 122.461 1.00 47.06 C
ATOM 14 N1 C B2337 69.101 106.113 122.683 1.00 45.22 N
ATOM 15 C2 C B2337 67.781 106.524 122.908 1.00 44.22 C
ATOM 16 O2 C B2337 67.532 107.735 122.967 1.00 44.87 O
ATOM 17 N3 C B2337 66.816 105.597 123.065 1.00 43.19 N
ATOM 18 C4 C B2337 67.125 104.302 123.023 1.00 44.30 C
ATOM 19 N4 C B2337 66.135 103.422 123.172 1.00 42.09 N
ATOM 20 C5 C B2337 68.465 103.851 122.823 1.00 45.12 C
ATOM 21 C6 C B2337 69.413 104.782 122.659 1.00 43.93 C
ATOM 22 P A B2338 72.807 107.406 126.456 1.00 50.70 P
ATOM 23 OP1 A B2338 74.010 108.062 127.025 1.00 50.42 O
ATOM 24 OP2 A B2338 72.599 105.952 126.668 1.00 49.53 O
ATOM 25 O5' A B2338 71.511 108.164 126.977 1.00 49.45 O
TER
ATOM 2 P C A2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C A2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C A2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C A2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C A2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C A2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C A2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C A2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C A2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C A2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C A2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C A2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C A2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C A2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C A2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C A2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C A2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C A2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C A2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C A2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G A2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G A2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G A2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G A2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 1 O3' U B2336 73.398 102.396 121.794 1.00 45.43 O
ATOM 2 P C B2337 73.404 102.966 123.300 1.00 47.57 P
ATOM 3 OP1 C B2337 74.819 103.243 123.655 1.00 45.57 O
ATOM 4 OP2 C B2337 72.572 102.093 124.177 1.00 43.61 O
ATOM 5 O5' C B2337 72.666 104.372 123.186 1.00 48.35 O
ATOM 6 C5' C B2337 73.322 105.506 122.595 1.00 48.13 C
ATOM 7 C4' C B2337 72.429 106.721 122.684 1.00 49.01 C
ATOM 8 O4' C B2337 71.258 106.522 121.854 1.00 48.84 O
ATOM 9 C3' C B2337 71.858 107.013 124.060 1.00 48.24 C
ATOM 10 O3' C B2337 72.783 107.703 124.883 1.00 49.25 O
ATOM 11 C2' C B2337 70.625 107.839 123.733 1.00 47.04 C
ATOM 12 O2' C B2337 70.934 109.183 123.443 1.00 44.54 O
ATOM 13 C1' C B2337 70.136 107.141 122.461 1.00 47.06 C
ATOM 14 N1 C B2337 69.101 106.113 122.683 1.00 45.22 N
ATOM 15 C2 C B2337 67.781 106.524 122.908 1.00 44.22 C
ATOM 16 O2 C B2337 67.532 107.735 122.967 1.00 44.87 O
ATOM 17 N3 C B2337 66.816 105.597 123.065 1.00 43.19 N
ATOM 18 C4 C B2337 67.125 104.302 123.023 1.00 44.30 C
ATOM 19 N4 C B2337 66.135 103.422 123.172 1.00 42.09 N
ATOM 20 C5 C B2337 68.465 103.851 122.823 1.00 45.12 C
ATOM 21 C6 C B2337 69.413 104.782 122.659 1.00 43.93 C
ATOM 22 P A B2338 72.807 107.406 126.456 1.00 50.70 P
ATOM 23 OP1 A B2338 74.010 108.062 127.025 1.00 50.42 O
ATOM 24 OP2 A B2338 72.599 105.952 126.668 1.00 49.53 O
ATOM 25 O5' A B2338 71.511 108.164 126.977 1.00 49.45 O
TER
Atoms:
C2: (61.950,104.003,117.763)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
C2: (67.781,106.524,122.908)
OP1: (74.819,103.243,123.655)
OP2: (72.572,102.093,124.177)
C4: (67.125,104.302,123.023)
O5': (72.666,104.372,123.186)
C3': (71.858,107.013,124.060)
C1': (70.136,107.141,122.461)
O4': (71.258,106.522,121.854)
C5': (73.322,105.506,122.595)
P: (73.404,102.966,123.300)
O2: (67.532,107.735,122.967)
C4': (72.429,106.721,122.684)
C2': (70.625,107.839,123.733)
O2': (70.934,109.183,123.443)
N1: (69.101,106.113,122.683)
N3: (66.816,105.597,123.065)
N4: (66.135,103.422,123.172)
C6: (69.413,104.782,122.659)
C5: (68.465,103.851,122.823)
O3': (72.783,107.703,124.883)
OP1: (74.819,103.243,123.655)
OP2: (72.572,102.093,124.177)
C4: (67.125,104.302,123.023)
O5': (72.666,104.372,123.186)
C3': (71.858,107.013,124.060)
C1': (70.136,107.141,122.461)
O4': (71.258,106.522,121.854)
C5': (73.322,105.506,122.595)
P: (73.404,102.966,123.300)
O2: (67.532,107.735,122.967)
C4': (72.429,106.721,122.684)
C2': (70.625,107.839,123.733)
O2': (70.934,109.183,123.443)
N1: (69.101,106.113,122.683)
N3: (66.816,105.597,123.065)
N4: (66.135,103.422,123.172)
C6: (69.413,104.782,122.659)
C5: (68.465,103.851,122.823)
O3': (72.783,107.703,124.883)
Image (generated by PyMOL):