Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02334:02337
Extra
PDB:
ATOM 1 O3' U A2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C A2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C A2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C A2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C A2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C A2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C A2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C A2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C A2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C A2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C A2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C A2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C A2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C A2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C A2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C A2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C A2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G A2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G A2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G A2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G A2335 65.656 98.229 120.117 1.00 45.02 O
TER
ATOM 1 O3' U B2336 73.099 102.045 121.523 1.00 46.28 O
ATOM 2 P C B2337 73.067 102.591 123.035 1.00 48.52 P
ATOM 3 OP1 C B2337 74.474 102.784 123.462 1.00 46.81 O
ATOM 4 OP2 C B2337 72.163 101.730 123.846 1.00 47.11 O
ATOM 5 O5' C B2337 72.399 104.031 122.895 1.00 47.53 O
ATOM 6 C5' C B2337 73.125 105.127 122.305 1.00 46.55 C
ATOM 7 C4' C B2337 72.305 106.389 122.370 1.00 45.97 C
ATOM 8 O4' C B2337 71.146 106.256 121.511 1.00 45.03 O
ATOM 9 C3' C B2337 71.724 106.702 123.736 1.00 45.83 C
ATOM 10 O3' C B2337 72.654 107.351 124.583 1.00 46.37 O
ATOM 11 C2' C B2337 70.520 107.567 123.399 1.00 44.31 C
ATOM 12 O2' C B2337 70.867 108.909 123.138 1.00 43.25 O
ATOM 13 C1' C B2337 70.031 106.898 122.113 1.00 43.77 C
ATOM 14 N1 C B2337 68.975 105.891 122.323 1.00 41.65 N
ATOM 15 C2 C B2337 67.657 106.322 122.489 1.00 40.54 C
ATOM 16 O2 C B2337 67.418 107.536 122.511 1.00 39.92 O
ATOM 17 N3 C B2337 66.676 105.406 122.627 1.00 41.08 N
ATOM 18 C4 C B2337 66.971 104.106 122.617 1.00 40.20 C
ATOM 19 N4 C B2337 65.965 103.239 122.732 1.00 39.35 N
ATOM 20 C5 C B2337 68.309 103.640 122.482 1.00 40.75 C
ATOM 21 C6 C B2337 69.270 104.556 122.339 1.00 40.09 C
ATOM 22 P A B2338 72.616 107.055 126.158 1.00 48.66 P
ATOM 23 OP1 A B2338 73.838 107.660 126.746 1.00 49.45 O
ATOM 24 OP2 A B2338 72.348 105.609 126.361 1.00 48.36 O
ATOM 25 O5' A B2338 71.335 107.859 126.654 1.00 46.36 O
TER
ATOM 2 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C A2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C A2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C A2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C A2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C A2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C A2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C A2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C A2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C A2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C A2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C A2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C A2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C A2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C A2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C A2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C A2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G A2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G A2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G A2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G A2335 65.656 98.229 120.117 1.00 45.02 O
TER
ATOM 1 O3' U B2336 73.099 102.045 121.523 1.00 46.28 O
ATOM 2 P C B2337 73.067 102.591 123.035 1.00 48.52 P
ATOM 3 OP1 C B2337 74.474 102.784 123.462 1.00 46.81 O
ATOM 4 OP2 C B2337 72.163 101.730 123.846 1.00 47.11 O
ATOM 5 O5' C B2337 72.399 104.031 122.895 1.00 47.53 O
ATOM 6 C5' C B2337 73.125 105.127 122.305 1.00 46.55 C
ATOM 7 C4' C B2337 72.305 106.389 122.370 1.00 45.97 C
ATOM 8 O4' C B2337 71.146 106.256 121.511 1.00 45.03 O
ATOM 9 C3' C B2337 71.724 106.702 123.736 1.00 45.83 C
ATOM 10 O3' C B2337 72.654 107.351 124.583 1.00 46.37 O
ATOM 11 C2' C B2337 70.520 107.567 123.399 1.00 44.31 C
ATOM 12 O2' C B2337 70.867 108.909 123.138 1.00 43.25 O
ATOM 13 C1' C B2337 70.031 106.898 122.113 1.00 43.77 C
ATOM 14 N1 C B2337 68.975 105.891 122.323 1.00 41.65 N
ATOM 15 C2 C B2337 67.657 106.322 122.489 1.00 40.54 C
ATOM 16 O2 C B2337 67.418 107.536 122.511 1.00 39.92 O
ATOM 17 N3 C B2337 66.676 105.406 122.627 1.00 41.08 N
ATOM 18 C4 C B2337 66.971 104.106 122.617 1.00 40.20 C
ATOM 19 N4 C B2337 65.965 103.239 122.732 1.00 39.35 N
ATOM 20 C5 C B2337 68.309 103.640 122.482 1.00 40.75 C
ATOM 21 C6 C B2337 69.270 104.556 122.339 1.00 40.09 C
ATOM 22 P A B2338 72.616 107.055 126.158 1.00 48.66 P
ATOM 23 OP1 A B2338 73.838 107.660 126.746 1.00 49.45 O
ATOM 24 OP2 A B2338 72.348 105.609 126.361 1.00 48.36 O
ATOM 25 O5' A B2338 71.335 107.859 126.654 1.00 46.36 O
TER
Atoms:
C2: (61.690,103.942,117.405)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
C2: (67.657,106.322,122.489)
OP1: (74.474,102.784,123.462)
OP2: (72.163,101.730,123.846)
C4: (66.971,104.106,122.617)
O5': (72.399,104.031,122.895)
C3': (71.724,106.702,123.736)
C1': (70.031,106.898,122.113)
O4': (71.146,106.256,121.511)
C5': (73.125,105.127,122.305)
P: (73.067,102.591,123.035)
O2: (67.418,107.536,122.511)
C4': (72.305,106.389,122.370)
C2': (70.520,107.567,123.399)
O2': (70.867,108.909,123.138)
N1: (68.975,105.891,122.323)
N3: (66.676,105.406,122.627)
N4: (65.965,103.239,122.732)
C6: (69.270,104.556,122.339)
C5: (68.309,103.640,122.482)
O3': (72.654,107.351,124.583)
OP1: (74.474,102.784,123.462)
OP2: (72.163,101.730,123.846)
C4: (66.971,104.106,122.617)
O5': (72.399,104.031,122.895)
C3': (71.724,106.702,123.736)
C1': (70.031,106.898,122.113)
O4': (71.146,106.256,121.511)
C5': (73.125,105.127,122.305)
P: (73.067,102.591,123.035)
O2: (67.418,107.536,122.511)
C4': (72.305,106.389,122.370)
C2': (70.520,107.567,123.399)
O2': (70.867,108.909,123.138)
N1: (68.975,105.891,122.323)
N3: (66.676,105.406,122.627)
N4: (65.965,103.239,122.732)
C6: (69.270,104.556,122.339)
C5: (68.309,103.640,122.482)
O3': (72.654,107.351,124.583)
Image (generated by PyMOL):