Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A46:A51
Extra
PDB:
ATOM 1 O3' U A 45 55.483 165.457 36.124 1.00 51.51 O
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' A B 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 2 P G B 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 3 OP1 G B 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 4 OP2 G B 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 5 O5' G B 51 53.512 157.493 48.614 1.00 49.94 O
ATOM 6 C5' G B 51 53.616 156.709 49.804 1.00 49.35 C
ATOM 7 C4' G B 51 52.550 155.643 49.797 1.00 50.40 C
ATOM 8 O4' G B 51 51.242 156.274 49.862 1.00 50.08 O
ATOM 9 C3' G B 51 52.498 154.774 48.549 1.00 49.14 C
ATOM 10 O3' G B 51 53.447 153.707 48.642 1.00 49.05 O
ATOM 11 C2' G B 51 51.051 154.294 48.552 1.00 49.26 C
ATOM 12 O2' G B 51 50.838 153.214 49.425 1.00 48.66 O
ATOM 13 C1' G B 51 50.312 155.517 49.108 1.00 51.11 C
ATOM 14 N9 G B 51 49.752 156.373 48.067 1.00 53.63 N
ATOM 15 C8 G B 51 50.167 157.639 47.735 1.00 54.69 C
ATOM 16 N7 G B 51 49.536 158.133 46.702 1.00 55.34 N
ATOM 17 C5 G B 51 48.643 157.136 46.332 1.00 55.02 C
ATOM 18 C6 G B 51 47.735 157.080 45.253 1.00 54.81 C
ATOM 19 O6 G B 51 47.553 157.907 44.358 1.00 55.08 O
ATOM 20 N1 G B 51 47.010 155.899 45.260 1.00 55.05 N
ATOM 21 C2 G B 51 47.154 154.889 46.172 1.00 55.16 C
ATOM 22 N2 G B 51 46.351 153.832 46.014 1.00 55.51 N
ATOM 23 N3 G B 51 48.023 154.912 47.169 1.00 54.68 N
ATOM 24 C4 G B 51 48.732 156.057 47.188 1.00 54.18 C
ATOM 25 P C B 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 26 OP1 C B 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 27 OP2 C B 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 28 O5' C B 52 52.999 152.499 46.490 1.00 51.12 O
TER
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' A B 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 2 P G B 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 3 OP1 G B 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 4 OP2 G B 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 5 O5' G B 51 53.512 157.493 48.614 1.00 49.94 O
ATOM 6 C5' G B 51 53.616 156.709 49.804 1.00 49.35 C
ATOM 7 C4' G B 51 52.550 155.643 49.797 1.00 50.40 C
ATOM 8 O4' G B 51 51.242 156.274 49.862 1.00 50.08 O
ATOM 9 C3' G B 51 52.498 154.774 48.549 1.00 49.14 C
ATOM 10 O3' G B 51 53.447 153.707 48.642 1.00 49.05 O
ATOM 11 C2' G B 51 51.051 154.294 48.552 1.00 49.26 C
ATOM 12 O2' G B 51 50.838 153.214 49.425 1.00 48.66 O
ATOM 13 C1' G B 51 50.312 155.517 49.108 1.00 51.11 C
ATOM 14 N9 G B 51 49.752 156.373 48.067 1.00 53.63 N
ATOM 15 C8 G B 51 50.167 157.639 47.735 1.00 54.69 C
ATOM 16 N7 G B 51 49.536 158.133 46.702 1.00 55.34 N
ATOM 17 C5 G B 51 48.643 157.136 46.332 1.00 55.02 C
ATOM 18 C6 G B 51 47.735 157.080 45.253 1.00 54.81 C
ATOM 19 O6 G B 51 47.553 157.907 44.358 1.00 55.08 O
ATOM 20 N1 G B 51 47.010 155.899 45.260 1.00 55.05 N
ATOM 21 C2 G B 51 47.154 154.889 46.172 1.00 55.16 C
ATOM 22 N2 G B 51 46.351 153.832 46.014 1.00 55.51 N
ATOM 23 N3 G B 51 48.023 154.912 47.169 1.00 54.68 N
ATOM 24 C4 G B 51 48.732 156.057 47.188 1.00 54.18 C
ATOM 25 P C B 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 26 OP1 C B 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 27 OP2 C B 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 28 O5' C B 52 52.999 152.499 46.490 1.00 51.12 O
TER
Atoms:
OP1: (54.135,167.585,36.030)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP1: (55.950,158.052,48.560)
OP2: (54.323,159.089,46.884)
C3': (52.498,154.774,48.549)
C1': (50.312,155.517,49.108)
C5': (53.616,156.709,49.804)
O6: (47.553,157.907,44.358)
O4': (51.242,156.274,49.862)
C8: (50.167,157.639,47.735)
C2: (47.154,154.889,46.172)
C6: (47.735,157.080,45.253)
C5: (48.643,157.136,46.332)
C4: (48.732,156.057,47.188)
P: (54.610,158.579,48.247)
C4': (52.550,155.643,49.797)
C2': (51.051,154.294,48.552)
O2': (50.838,153.214,49.425)
N1: (47.010,155.899,45.260)
N2: (46.351,153.832,46.014)
N3: (48.023,154.912,47.169)
N7: (49.536,158.133,46.702)
N9: (49.752,156.373,48.067)
O5': (53.512,157.493,48.614)
O3': (53.447,153.707,48.642)
OP2: (54.323,159.089,46.884)
C3': (52.498,154.774,48.549)
C1': (50.312,155.517,49.108)
C5': (53.616,156.709,49.804)
O6: (47.553,157.907,44.358)
O4': (51.242,156.274,49.862)
C8: (50.167,157.639,47.735)
C2: (47.154,154.889,46.172)
C6: (47.735,157.080,45.253)
C5: (48.643,157.136,46.332)
C4: (48.732,156.057,47.188)
P: (54.610,158.579,48.247)
C4': (52.550,155.643,49.797)
C2': (51.051,154.294,48.552)
O2': (50.838,153.214,49.425)
N1: (47.010,155.899,45.260)
N2: (46.351,153.832,46.014)
N3: (48.023,154.912,47.169)
N7: (49.536,158.133,46.702)
N9: (49.752,156.373,48.067)
O5': (53.512,157.493,48.614)
O3': (53.447,153.707,48.642)
Image (generated by PyMOL):