ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01061:01206

Extra

PDB:
ATOM 1 O3' U A1060 18.820 104.466 123.992 1.00 39.42 O
ATOM 2 P C A1061 19.184 104.248 125.537 1.00 38.38 P
ATOM 3 OP1 C A1061 20.606 103.860 125.604 1.00 44.60 O
ATOM 4 OP2 C A1061 18.171 103.353 126.116 1.00 42.24 O
ATOM 5 O5' C A1061 19.044 105.700 126.164 1.00 38.51 O
ATOM 6 C5' C A1061 17.869 106.096 126.894 1.00 37.75 C
ATOM 7 C4' C A1061 18.031 107.514 127.389 1.00 39.20 C
ATOM 8 O4' C A1061 19.193 107.590 128.262 1.00 38.35 O
ATOM 9 C3' C A1061 18.329 108.528 126.300 1.00 37.21 C
ATOM 10 O3' C A1061 17.136 108.959 125.668 1.00 40.17 O
ATOM 11 C2' C A1061 19.035 109.637 127.070 1.00 37.21 C
ATOM 12 O2' C A1061 18.170 110.472 127.810 1.00 38.14 O
ATOM 13 C1' C A1061 19.869 108.823 128.058 1.00 36.29 C
ATOM 14 N1 C A1061 21.246 108.544 127.592 1.00 34.87 N
ATOM 15 C2 C A1061 22.167 109.613 127.495 1.00 35.33 C
ATOM 16 O2 C A1061 21.785 110.774 127.737 1.00 33.88 O
ATOM 17 N3 C A1061 23.442 109.349 127.133 1.00 34.28 N
ATOM 18 C4 C A1061 23.813 108.097 126.853 1.00 34.69 C
ATOM 19 N4 C A1061 25.092 107.884 126.525 1.00 34.91 N
ATOM 20 C5 C A1061 22.896 107.008 126.902 1.00 32.28 C
ATOM 21 C6 C A1061 21.636 107.273 127.273 1.00 32.99 C
ATOM 22 P C A1062 17.174 109.445 124.138 1.00 41.33 P
ATOM 23 OP1 C A1062 15.781 109.766 123.763 1.00 43.88 O
ATOM 24 OP2 C A1062 17.953 108.480 123.308 1.00 40.39 O
ATOM 25 O5' C A1062 17.975 110.819 124.209 1.00 40.91 O
TER

ATOM 1 O3' A B1205 22.623 103.244 133.683 1.00 41.80 O
ATOM 2 P A B1206 21.199 103.433 132.981 1.00 41.08 P
ATOM 3 OP1 A B1206 20.549 104.606 133.631 1.00 39.06 O
ATOM 4 OP2 A B1206 20.520 102.121 132.981 1.00 41.07 O
ATOM 5 O5' A B1206 21.576 103.829 131.477 1.00 41.46 O
ATOM 6 C5' A B1206 22.082 102.844 130.536 1.00 38.45 C
ATOM 7 C4' A B1206 23.394 103.307 129.917 1.00 37.65 C
ATOM 8 O4' A B1206 23.245 104.680 129.447 1.00 38.47 O
ATOM 9 C3' A B1206 24.602 103.318 130.850 1.00 36.12 C
ATOM 10 O3' A B1206 25.780 103.109 130.080 1.00 38.03 O
ATOM 11 C2' A B1206 24.594 104.758 131.359 1.00 37.65 C
ATOM 12 O2' A B1206 25.843 105.227 131.814 1.00 37.57 O
ATOM 13 C1' A B1206 24.182 105.513 130.099 1.00 36.99 C
ATOM 14 N9 A B1206 23.555 106.806 130.367 1.00 37.02 N
ATOM 15 C8 A B1206 22.279 107.054 130.817 1.00 37.05 C
ATOM 16 N7 A B1206 22.011 108.331 130.968 1.00 37.21 N
ATOM 17 C5 A B1206 23.187 108.967 130.589 1.00 36.46 C
ATOM 18 C6 A B1206 23.560 110.326 130.532 1.00 35.13 C
ATOM 19 N6 A B1206 22.755 111.336 130.867 1.00 35.06 N
ATOM 20 N1 A B1206 24.810 110.617 130.121 1.00 34.22 N
ATOM 21 C2 A B1206 25.625 109.616 129.797 1.00 34.24 C
ATOM 22 N3 A B1206 25.397 108.305 129.811 1.00 39.02 N
ATOM 23 C4 A B1206 24.145 108.041 130.219 1.00 36.64 C
ATOM 24 P A B1207 26.263 101.619 129.710 1.00 41.20 P
ATOM 25 OP1 A B1207 26.676 101.665 128.284 1.00 43.56 O
ATOM 26 OP2 A B1207 25.251 100.615 130.137 1.00 44.38 O
ATOM 27 O5' A B1207 27.587 101.394 130.573 1.00 42.67 O
TER

Atoms:
C2: (22.167,109.613,127.495)
OP1: (20.606,103.860,125.604)
OP2: (18.171,103.353,126.116)
C4: (23.813,108.097,126.853)
O5': (19.044,105.700,126.164)
C3': (18.329,108.528,126.300)
C1': (19.869,108.823,128.058)
O4': (19.193,107.590,128.262)
C5': (17.869,106.096,126.894)
P: (19.184,104.248,125.537)
O2: (21.785,110.774,127.737)
C4': (18.031,107.514,127.389)
C2': (19.035,109.637,127.070)
O2': (18.170,110.472,127.810)
N1: (21.246,108.544,127.592)
N3: (23.442,109.349,127.133)
N4: (25.092,107.884,126.525)
C6: (21.636,107.273,127.273)
C5: (22.896,107.008,126.902)
O3': (17.136,108.959,125.668)
OP1: (20.549,104.606,133.631)
OP2: (20.520,102.121,132.981)
C3': (24.602,103.318,130.850)
C1': (24.182,105.513,130.099)
C5': (22.082,102.844,130.536)
O4': (23.245,104.680,129.447)
C8: (22.279,107.054,130.817)
O2': (25.843,105.227,131.814)
C6: (23.560,110.326,130.532)
C5: (23.187,108.967,130.589)
C4: (24.145,108.041,130.219)
P: (21.199,103.433,132.981)
C4': (23.394,103.307,129.917)
C2': (24.594,104.758,131.359)
C2: (25.625,109.616,129.797)
N1: (24.810,110.617,130.121)
N3: (25.397,108.305,129.811)
N6: (22.755,111.336,130.867)
N7: (22.011,108.331,130.968)
N9: (23.555,106.806,130.367)
O5': (21.576,103.829,131.477)
O3': (25.780,103.109,130.080)
Image (generated by PyMOL):
PyMOL image
show in jmol