Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:046:051
Extra
PDB:
ATOM 1 O3' U A 45 54.711 164.722 36.164 1.00 51.64 O
ATOM 2 P G A 46 53.723 165.611 37.060 1.00 53.15 P
ATOM 3 OP1 G A 46 53.410 166.836 36.288 1.00 55.61 O
ATOM 4 OP2 G A 46 54.276 165.725 38.426 1.00 55.39 O
ATOM 5 O5' G A 46 52.390 164.750 37.128 1.00 56.10 O
ATOM 6 C5' G A 46 51.695 164.408 35.924 1.00 56.15 C
ATOM 7 C4' G A 46 50.213 164.437 36.154 1.00 56.65 C
ATOM 8 O4' G A 46 49.830 163.327 37.010 1.00 58.75 O
ATOM 9 C3' G A 46 49.653 165.691 36.815 1.00 57.41 C
ATOM 10 O3' G A 46 48.369 165.916 36.250 1.00 60.23 O
ATOM 11 C2' G A 46 49.491 165.253 38.269 1.00 57.17 C
ATOM 12 O2' G A 46 48.502 165.992 38.956 1.00 55.05 O
ATOM 13 C1' G A 46 49.038 163.807 38.075 1.00 56.46 C
ATOM 14 N9 G A 46 49.167 162.878 39.196 1.00 56.63 N
ATOM 15 C8 G A 46 49.882 163.043 40.362 1.00 55.75 C
ATOM 16 N7 G A 46 49.805 162.012 41.162 1.00 54.59 N
ATOM 17 C5 G A 46 48.991 161.112 40.486 1.00 55.76 C
ATOM 18 C6 G A 46 48.557 159.809 40.847 1.00 54.96 C
ATOM 19 O6 G A 46 48.822 159.164 41.862 1.00 54.13 O
ATOM 20 N1 G A 46 47.737 159.252 39.870 1.00 56.47 N
ATOM 21 C2 G A 46 47.384 159.863 38.693 1.00 55.50 C
ATOM 22 N2 G A 46 46.583 159.165 37.883 1.00 54.15 N
ATOM 23 N3 G A 46 47.789 161.070 38.339 1.00 56.33 N
ATOM 24 C4 G A 46 48.583 161.634 39.275 1.00 56.40 C
ATOM 25 P C A 47 48.046 167.312 35.533 1.00 61.48 P
ATOM 26 OP1 C A 47 46.676 167.199 34.973 1.00 64.01 O
ATOM 27 OP2 C A 47 49.180 167.628 34.633 1.00 61.43 O
ATOM 28 O5' C A 47 48.002 168.345 36.744 1.00 61.82 O
TER
ATOM 1 O3' A B 50 53.776 158.705 49.216 1.00 52.68 O
ATOM 2 P G B 51 53.971 157.646 48.032 1.00 53.23 P
ATOM 3 OP1 G B 51 55.312 157.020 48.176 1.00 55.10 O
ATOM 4 OP2 G B 51 53.610 158.305 46.755 1.00 52.76 O
ATOM 5 O5' G B 51 52.883 156.534 48.362 1.00 53.71 O
ATOM 6 C5' G B 51 53.006 155.710 49.530 1.00 51.72 C
ATOM 7 C4' G B 51 51.928 154.652 49.540 1.00 51.19 C
ATOM 8 O4' G B 51 50.623 155.277 49.644 1.00 50.95 O
ATOM 9 C3' G B 51 51.827 153.809 48.284 1.00 50.36 C
ATOM 10 O3' G B 51 52.787 152.774 48.273 1.00 50.61 O
ATOM 11 C2' G B 51 50.402 153.288 48.367 1.00 51.80 C
ATOM 12 O2' G B 51 50.262 152.220 49.286 1.00 53.23 O
ATOM 13 C1' G B 51 49.674 154.524 48.900 1.00 51.52 C
ATOM 14 N9 G B 51 49.159 155.374 47.830 1.00 52.65 N
ATOM 15 C8 G B 51 49.601 156.631 47.490 1.00 52.63 C
ATOM 16 N7 G B 51 48.941 157.155 46.496 1.00 51.40 N
ATOM 17 C5 G B 51 48.009 156.187 46.155 1.00 52.42 C
ATOM 18 C6 G B 51 47.016 156.189 45.149 1.00 51.33 C
ATOM 19 O6 G B 51 46.727 157.094 44.356 1.00 51.58 O
ATOM 20 N1 G B 51 46.311 154.992 45.126 1.00 50.81 N
ATOM 21 C2 G B 51 46.518 153.936 45.976 1.00 51.34 C
ATOM 22 N2 G B 51 45.733 152.862 45.789 1.00 49.35 N
ATOM 23 N3 G B 51 47.427 153.930 46.934 1.00 51.06 N
ATOM 24 C4 G B 51 48.134 155.078 46.964 1.00 52.18 C
ATOM 25 P C B 52 53.394 152.271 46.879 1.00 51.08 P
ATOM 26 OP1 C B 52 54.433 151.259 47.202 1.00 51.70 O
ATOM 27 OP2 C B 52 53.744 153.435 46.030 1.00 52.97 O
ATOM 28 O5' C B 52 52.167 151.554 46.170 1.00 53.40 O
TER
ATOM 2 P G A 46 53.723 165.611 37.060 1.00 53.15 P
ATOM 3 OP1 G A 46 53.410 166.836 36.288 1.00 55.61 O
ATOM 4 OP2 G A 46 54.276 165.725 38.426 1.00 55.39 O
ATOM 5 O5' G A 46 52.390 164.750 37.128 1.00 56.10 O
ATOM 6 C5' G A 46 51.695 164.408 35.924 1.00 56.15 C
ATOM 7 C4' G A 46 50.213 164.437 36.154 1.00 56.65 C
ATOM 8 O4' G A 46 49.830 163.327 37.010 1.00 58.75 O
ATOM 9 C3' G A 46 49.653 165.691 36.815 1.00 57.41 C
ATOM 10 O3' G A 46 48.369 165.916 36.250 1.00 60.23 O
ATOM 11 C2' G A 46 49.491 165.253 38.269 1.00 57.17 C
ATOM 12 O2' G A 46 48.502 165.992 38.956 1.00 55.05 O
ATOM 13 C1' G A 46 49.038 163.807 38.075 1.00 56.46 C
ATOM 14 N9 G A 46 49.167 162.878 39.196 1.00 56.63 N
ATOM 15 C8 G A 46 49.882 163.043 40.362 1.00 55.75 C
ATOM 16 N7 G A 46 49.805 162.012 41.162 1.00 54.59 N
ATOM 17 C5 G A 46 48.991 161.112 40.486 1.00 55.76 C
ATOM 18 C6 G A 46 48.557 159.809 40.847 1.00 54.96 C
ATOM 19 O6 G A 46 48.822 159.164 41.862 1.00 54.13 O
ATOM 20 N1 G A 46 47.737 159.252 39.870 1.00 56.47 N
ATOM 21 C2 G A 46 47.384 159.863 38.693 1.00 55.50 C
ATOM 22 N2 G A 46 46.583 159.165 37.883 1.00 54.15 N
ATOM 23 N3 G A 46 47.789 161.070 38.339 1.00 56.33 N
ATOM 24 C4 G A 46 48.583 161.634 39.275 1.00 56.40 C
ATOM 25 P C A 47 48.046 167.312 35.533 1.00 61.48 P
ATOM 26 OP1 C A 47 46.676 167.199 34.973 1.00 64.01 O
ATOM 27 OP2 C A 47 49.180 167.628 34.633 1.00 61.43 O
ATOM 28 O5' C A 47 48.002 168.345 36.744 1.00 61.82 O
TER
ATOM 1 O3' A B 50 53.776 158.705 49.216 1.00 52.68 O
ATOM 2 P G B 51 53.971 157.646 48.032 1.00 53.23 P
ATOM 3 OP1 G B 51 55.312 157.020 48.176 1.00 55.10 O
ATOM 4 OP2 G B 51 53.610 158.305 46.755 1.00 52.76 O
ATOM 5 O5' G B 51 52.883 156.534 48.362 1.00 53.71 O
ATOM 6 C5' G B 51 53.006 155.710 49.530 1.00 51.72 C
ATOM 7 C4' G B 51 51.928 154.652 49.540 1.00 51.19 C
ATOM 8 O4' G B 51 50.623 155.277 49.644 1.00 50.95 O
ATOM 9 C3' G B 51 51.827 153.809 48.284 1.00 50.36 C
ATOM 10 O3' G B 51 52.787 152.774 48.273 1.00 50.61 O
ATOM 11 C2' G B 51 50.402 153.288 48.367 1.00 51.80 C
ATOM 12 O2' G B 51 50.262 152.220 49.286 1.00 53.23 O
ATOM 13 C1' G B 51 49.674 154.524 48.900 1.00 51.52 C
ATOM 14 N9 G B 51 49.159 155.374 47.830 1.00 52.65 N
ATOM 15 C8 G B 51 49.601 156.631 47.490 1.00 52.63 C
ATOM 16 N7 G B 51 48.941 157.155 46.496 1.00 51.40 N
ATOM 17 C5 G B 51 48.009 156.187 46.155 1.00 52.42 C
ATOM 18 C6 G B 51 47.016 156.189 45.149 1.00 51.33 C
ATOM 19 O6 G B 51 46.727 157.094 44.356 1.00 51.58 O
ATOM 20 N1 G B 51 46.311 154.992 45.126 1.00 50.81 N
ATOM 21 C2 G B 51 46.518 153.936 45.976 1.00 51.34 C
ATOM 22 N2 G B 51 45.733 152.862 45.789 1.00 49.35 N
ATOM 23 N3 G B 51 47.427 153.930 46.934 1.00 51.06 N
ATOM 24 C4 G B 51 48.134 155.078 46.964 1.00 52.18 C
ATOM 25 P C B 52 53.394 152.271 46.879 1.00 51.08 P
ATOM 26 OP1 C B 52 54.433 151.259 47.202 1.00 51.70 O
ATOM 27 OP2 C B 52 53.744 153.435 46.030 1.00 52.97 O
ATOM 28 O5' C B 52 52.167 151.554 46.170 1.00 53.40 O
TER
Atoms:
OP1: (53.410,166.836,36.288)
OP2: (54.276,165.725,38.426)
C3': (49.653,165.691,36.815)
C1': (49.038,163.807,38.075)
C5': (51.695,164.408,35.924)
O6: (48.822,159.164,41.862)
O4': (49.830,163.327,37.010)
C8: (49.882,163.043,40.362)
C2: (47.384,159.863,38.693)
C6: (48.557,159.809,40.847)
C5: (48.991,161.112,40.486)
C4: (48.583,161.634,39.275)
P: (53.723,165.611,37.060)
C4': (50.213,164.437,36.154)
C2': (49.491,165.253,38.269)
O2': (48.502,165.992,38.956)
N1: (47.737,159.252,39.870)
N2: (46.583,159.165,37.883)
N3: (47.789,161.070,38.339)
N7: (49.805,162.012,41.162)
N9: (49.167,162.878,39.196)
O5': (52.390,164.750,37.128)
O3': (48.369,165.916,36.250)
OP2: (54.276,165.725,38.426)
C3': (49.653,165.691,36.815)
C1': (49.038,163.807,38.075)
C5': (51.695,164.408,35.924)
O6: (48.822,159.164,41.862)
O4': (49.830,163.327,37.010)
C8: (49.882,163.043,40.362)
C2: (47.384,159.863,38.693)
C6: (48.557,159.809,40.847)
C5: (48.991,161.112,40.486)
C4: (48.583,161.634,39.275)
P: (53.723,165.611,37.060)
C4': (50.213,164.437,36.154)
C2': (49.491,165.253,38.269)
O2': (48.502,165.992,38.956)
N1: (47.737,159.252,39.870)
N2: (46.583,159.165,37.883)
N3: (47.789,161.070,38.339)
N7: (49.805,162.012,41.162)
N9: (49.167,162.878,39.196)
O5': (52.390,164.750,37.128)
O3': (48.369,165.916,36.250)
OP1: (55.312,157.020,48.176)
OP2: (53.610,158.305,46.755)
C3': (51.827,153.809,48.284)
C1': (49.674,154.524,48.900)
C5': (53.006,155.710,49.530)
O6: (46.727,157.094,44.356)
O4': (50.623,155.277,49.644)
C8: (49.601,156.631,47.490)
C2: (46.518,153.936,45.976)
C6: (47.016,156.189,45.149)
C5: (48.009,156.187,46.155)
C4: (48.134,155.078,46.964)
P: (53.971,157.646,48.032)
C4': (51.928,154.652,49.540)
C2': (50.402,153.288,48.367)
O2': (50.262,152.220,49.286)
N1: (46.311,154.992,45.126)
N2: (45.733,152.862,45.789)
N3: (47.427,153.930,46.934)
N7: (48.941,157.155,46.496)
N9: (49.159,155.374,47.830)
O5': (52.883,156.534,48.362)
O3': (52.787,152.774,48.273)
OP2: (53.610,158.305,46.755)
C3': (51.827,153.809,48.284)
C1': (49.674,154.524,48.900)
C5': (53.006,155.710,49.530)
O6: (46.727,157.094,44.356)
O4': (50.623,155.277,49.644)
C8: (49.601,156.631,47.490)
C2: (46.518,153.936,45.976)
C6: (47.016,156.189,45.149)
C5: (48.009,156.187,46.155)
C4: (48.134,155.078,46.964)
P: (53.971,157.646,48.032)
C4': (51.928,154.652,49.540)
C2': (50.402,153.288,48.367)
O2': (50.262,152.220,49.286)
N1: (46.311,154.992,45.126)
N2: (45.733,152.862,45.789)
N3: (47.427,153.930,46.934)
N7: (48.941,157.155,46.496)
N9: (49.159,155.374,47.830)
O5': (52.883,156.534,48.362)
O3': (52.787,152.774,48.273)
Image (generated by PyMOL):