Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:046:051
Extra
PDB:
ATOM 1 O3' U A 45 55.350 165.681 36.059 1.00 46.86 O
ATOM 2 P G A 46 54.339 166.629 36.878 1.00 48.10 P
ATOM 3 OP1 G A 46 54.048 167.797 36.015 1.00 49.23 O
ATOM 4 OP2 G A 46 54.848 166.849 38.250 1.00 49.23 O
ATOM 5 O5' G A 46 53.011 165.762 36.974 1.00 47.90 O
ATOM 6 C5' G A 46 52.317 165.379 35.787 1.00 45.83 C
ATOM 7 C4' G A 46 50.836 165.419 36.019 1.00 46.23 C
ATOM 8 O4' G A 46 50.463 164.302 36.864 1.00 48.31 O
ATOM 9 C3' G A 46 50.291 166.670 36.702 1.00 47.09 C
ATOM 10 O3' G A 46 49.014 166.964 36.144 1.00 48.90 O
ATOM 11 C2' G A 46 50.129 166.216 38.150 1.00 45.79 C
ATOM 12 O2' G A 46 49.117 166.919 38.837 1.00 45.07 O
ATOM 13 C1' G A 46 49.689 164.773 37.944 1.00 48.94 C
ATOM 14 N9 G A 46 49.837 163.846 39.065 1.00 51.85 N
ATOM 15 C8 G A 46 50.547 164.022 40.233 1.00 52.41 C
ATOM 16 N7 G A 46 50.472 162.994 41.037 1.00 51.87 N
ATOM 17 C5 G A 46 49.670 162.086 40.359 1.00 52.83 C
ATOM 18 C6 G A 46 49.239 160.787 40.725 1.00 52.41 C
ATOM 19 O6 G A 46 49.494 160.154 41.754 1.00 52.87 O
ATOM 20 N1 G A 46 48.433 160.219 39.741 1.00 52.69 N
ATOM 21 C2 G A 46 48.089 160.820 38.557 1.00 51.72 C
ATOM 22 N2 G A 46 47.303 160.113 37.739 1.00 51.60 N
ATOM 23 N3 G A 46 48.487 162.024 38.202 1.00 51.72 N
ATOM 24 C4 G A 46 49.268 162.597 39.143 1.00 52.34 C
ATOM 25 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 26 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 27 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 28 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
TER
ATOM 1 O3' A B 50 54.298 159.765 49.172 1.00 43.40 O
ATOM 2 P G B 51 54.475 158.678 48.009 1.00 45.89 P
ATOM 3 OP1 G B 51 55.798 158.042 48.197 1.00 47.93 O
ATOM 4 OP2 G B 51 54.144 159.312 46.705 1.00 44.98 O
ATOM 5 O5' G B 51 53.367 157.586 48.342 1.00 46.42 O
ATOM 6 C5' G B 51 53.480 156.751 49.507 1.00 44.53 C
ATOM 7 C4' G B 51 52.412 155.679 49.492 1.00 44.81 C
ATOM 8 O4' G B 51 51.101 156.301 49.558 1.00 44.14 O
ATOM 9 C3' G B 51 52.346 154.820 48.241 1.00 44.32 C
ATOM 10 O3' G B 51 53.307 153.773 48.249 1.00 43.89 O
ATOM 11 C2' G B 51 50.917 154.303 48.293 1.00 45.68 C
ATOM 12 O2' G B 51 50.753 153.254 49.227 1.00 47.01 O
ATOM 13 C1' G B 51 50.173 155.542 48.795 1.00 45.36 C
ATOM 14 N9 G B 51 49.666 156.386 47.712 1.00 46.05 N
ATOM 15 C8 G B 51 50.116 157.635 47.352 1.00 45.26 C
ATOM 16 N7 G B 51 49.467 158.144 46.342 1.00 44.31 N
ATOM 17 C5 G B 51 48.532 157.174 46.010 1.00 45.61 C
ATOM 18 C6 G B 51 47.554 157.156 44.984 1.00 45.39 C
ATOM 19 O6 G B 51 47.308 158.024 44.140 1.00 45.71 O
ATOM 20 N1 G B 51 46.824 155.974 44.996 1.00 44.71 N
ATOM 21 C2 G B 51 47.009 154.941 45.879 1.00 45.26 C
ATOM 22 N2 G B 51 46.206 153.881 45.725 1.00 44.71 N
ATOM 23 N3 G B 51 47.917 154.944 46.840 1.00 45.91 N
ATOM 24 C4 G B 51 48.640 156.083 46.847 1.00 45.86 C
ATOM 25 P C B 52 53.974 153.294 46.865 1.00 46.78 P
ATOM 26 OP1 C B 52 54.998 152.272 47.186 1.00 46.36 O
ATOM 27 OP2 C B 52 54.358 154.486 46.068 1.00 48.65 O
ATOM 28 O5' C B 52 52.781 152.572 46.103 1.00 46.23 O
TER
ATOM 2 P G A 46 54.339 166.629 36.878 1.00 48.10 P
ATOM 3 OP1 G A 46 54.048 167.797 36.015 1.00 49.23 O
ATOM 4 OP2 G A 46 54.848 166.849 38.250 1.00 49.23 O
ATOM 5 O5' G A 46 53.011 165.762 36.974 1.00 47.90 O
ATOM 6 C5' G A 46 52.317 165.379 35.787 1.00 45.83 C
ATOM 7 C4' G A 46 50.836 165.419 36.019 1.00 46.23 C
ATOM 8 O4' G A 46 50.463 164.302 36.864 1.00 48.31 O
ATOM 9 C3' G A 46 50.291 166.670 36.702 1.00 47.09 C
ATOM 10 O3' G A 46 49.014 166.964 36.144 1.00 48.90 O
ATOM 11 C2' G A 46 50.129 166.216 38.150 1.00 45.79 C
ATOM 12 O2' G A 46 49.117 166.919 38.837 1.00 45.07 O
ATOM 13 C1' G A 46 49.689 164.773 37.944 1.00 48.94 C
ATOM 14 N9 G A 46 49.837 163.846 39.065 1.00 51.85 N
ATOM 15 C8 G A 46 50.547 164.022 40.233 1.00 52.41 C
ATOM 16 N7 G A 46 50.472 162.994 41.037 1.00 51.87 N
ATOM 17 C5 G A 46 49.670 162.086 40.359 1.00 52.83 C
ATOM 18 C6 G A 46 49.239 160.787 40.725 1.00 52.41 C
ATOM 19 O6 G A 46 49.494 160.154 41.754 1.00 52.87 O
ATOM 20 N1 G A 46 48.433 160.219 39.741 1.00 52.69 N
ATOM 21 C2 G A 46 48.089 160.820 38.557 1.00 51.72 C
ATOM 22 N2 G A 46 47.303 160.113 37.739 1.00 51.60 N
ATOM 23 N3 G A 46 48.487 162.024 38.202 1.00 51.72 N
ATOM 24 C4 G A 46 49.268 162.597 39.143 1.00 52.34 C
ATOM 25 P C A 47 48.772 168.370 35.407 1.00 48.14 P
ATOM 26 OP1 C A 47 47.411 168.365 34.808 1.00 50.00 O
ATOM 27 OP2 C A 47 49.957 168.619 34.542 1.00 46.67 O
ATOM 28 O5' C A 47 48.756 169.414 36.606 1.00 48.17 O
TER
ATOM 1 O3' A B 50 54.298 159.765 49.172 1.00 43.40 O
ATOM 2 P G B 51 54.475 158.678 48.009 1.00 45.89 P
ATOM 3 OP1 G B 51 55.798 158.042 48.197 1.00 47.93 O
ATOM 4 OP2 G B 51 54.144 159.312 46.705 1.00 44.98 O
ATOM 5 O5' G B 51 53.367 157.586 48.342 1.00 46.42 O
ATOM 6 C5' G B 51 53.480 156.751 49.507 1.00 44.53 C
ATOM 7 C4' G B 51 52.412 155.679 49.492 1.00 44.81 C
ATOM 8 O4' G B 51 51.101 156.301 49.558 1.00 44.14 O
ATOM 9 C3' G B 51 52.346 154.820 48.241 1.00 44.32 C
ATOM 10 O3' G B 51 53.307 153.773 48.249 1.00 43.89 O
ATOM 11 C2' G B 51 50.917 154.303 48.293 1.00 45.68 C
ATOM 12 O2' G B 51 50.753 153.254 49.227 1.00 47.01 O
ATOM 13 C1' G B 51 50.173 155.542 48.795 1.00 45.36 C
ATOM 14 N9 G B 51 49.666 156.386 47.712 1.00 46.05 N
ATOM 15 C8 G B 51 50.116 157.635 47.352 1.00 45.26 C
ATOM 16 N7 G B 51 49.467 158.144 46.342 1.00 44.31 N
ATOM 17 C5 G B 51 48.532 157.174 46.010 1.00 45.61 C
ATOM 18 C6 G B 51 47.554 157.156 44.984 1.00 45.39 C
ATOM 19 O6 G B 51 47.308 158.024 44.140 1.00 45.71 O
ATOM 20 N1 G B 51 46.824 155.974 44.996 1.00 44.71 N
ATOM 21 C2 G B 51 47.009 154.941 45.879 1.00 45.26 C
ATOM 22 N2 G B 51 46.206 153.881 45.725 1.00 44.71 N
ATOM 23 N3 G B 51 47.917 154.944 46.840 1.00 45.91 N
ATOM 24 C4 G B 51 48.640 156.083 46.847 1.00 45.86 C
ATOM 25 P C B 52 53.974 153.294 46.865 1.00 46.78 P
ATOM 26 OP1 C B 52 54.998 152.272 47.186 1.00 46.36 O
ATOM 27 OP2 C B 52 54.358 154.486 46.068 1.00 48.65 O
ATOM 28 O5' C B 52 52.781 152.572 46.103 1.00 46.23 O
TER
Atoms:
OP1: (54.048,167.797,36.015)
OP2: (54.848,166.849,38.250)
C3': (50.291,166.670,36.702)
C1': (49.689,164.773,37.944)
C5': (52.317,165.379,35.787)
O6: (49.494,160.154,41.754)
O4': (50.463,164.302,36.864)
C8: (50.547,164.022,40.233)
C2: (48.089,160.820,38.557)
C6: (49.239,160.787,40.725)
C5: (49.670,162.086,40.359)
C4: (49.268,162.597,39.143)
P: (54.339,166.629,36.878)
C4': (50.836,165.419,36.019)
C2': (50.129,166.216,38.150)
O2': (49.117,166.919,38.837)
N1: (48.433,160.219,39.741)
N2: (47.303,160.113,37.739)
N3: (48.487,162.024,38.202)
N7: (50.472,162.994,41.037)
N9: (49.837,163.846,39.065)
O5': (53.011,165.762,36.974)
O3': (49.014,166.964,36.144)
OP2: (54.848,166.849,38.250)
C3': (50.291,166.670,36.702)
C1': (49.689,164.773,37.944)
C5': (52.317,165.379,35.787)
O6: (49.494,160.154,41.754)
O4': (50.463,164.302,36.864)
C8: (50.547,164.022,40.233)
C2: (48.089,160.820,38.557)
C6: (49.239,160.787,40.725)
C5: (49.670,162.086,40.359)
C4: (49.268,162.597,39.143)
P: (54.339,166.629,36.878)
C4': (50.836,165.419,36.019)
C2': (50.129,166.216,38.150)
O2': (49.117,166.919,38.837)
N1: (48.433,160.219,39.741)
N2: (47.303,160.113,37.739)
N3: (48.487,162.024,38.202)
N7: (50.472,162.994,41.037)
N9: (49.837,163.846,39.065)
O5': (53.011,165.762,36.974)
O3': (49.014,166.964,36.144)
OP1: (55.798,158.042,48.197)
OP2: (54.144,159.312,46.705)
C3': (52.346,154.820,48.241)
C1': (50.173,155.542,48.795)
C5': (53.480,156.751,49.507)
O6: (47.308,158.024,44.140)
O4': (51.101,156.301,49.558)
C8: (50.116,157.635,47.352)
C2: (47.009,154.941,45.879)
C6: (47.554,157.156,44.984)
C5: (48.532,157.174,46.010)
C4: (48.640,156.083,46.847)
P: (54.475,158.678,48.009)
C4': (52.412,155.679,49.492)
C2': (50.917,154.303,48.293)
O2': (50.753,153.254,49.227)
N1: (46.824,155.974,44.996)
N2: (46.206,153.881,45.725)
N3: (47.917,154.944,46.840)
N7: (49.467,158.144,46.342)
N9: (49.666,156.386,47.712)
O5': (53.367,157.586,48.342)
O3': (53.307,153.773,48.249)
OP2: (54.144,159.312,46.705)
C3': (52.346,154.820,48.241)
C1': (50.173,155.542,48.795)
C5': (53.480,156.751,49.507)
O6: (47.308,158.024,44.140)
O4': (51.101,156.301,49.558)
C8: (50.116,157.635,47.352)
C2: (47.009,154.941,45.879)
C6: (47.554,157.156,44.984)
C5: (48.532,157.174,46.010)
C4: (48.640,156.083,46.847)
P: (54.475,158.678,48.009)
C4': (52.412,155.679,49.492)
C2': (50.917,154.303,48.293)
O2': (50.753,153.254,49.227)
N1: (46.824,155.974,44.996)
N2: (46.206,153.881,45.725)
N3: (47.917,154.944,46.840)
N7: (49.467,158.144,46.342)
N9: (49.666,156.386,47.712)
O5': (53.367,157.586,48.342)
O3': (53.307,153.773,48.249)
Image (generated by PyMOL):