Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:046:051
Extra
PDB:
ATOM 1 O3' U A 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G A 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G A 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G A 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G A 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G A 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G A 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G A 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G A 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G A 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G A 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G A 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G A 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G A 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G A 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G A 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G A 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G A 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G A 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G A 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C A 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C A 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C A 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C A 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 1 O3' A B 50 54.244 159.647 49.225 1.00 49.24 O
ATOM 2 P G B 51 54.461 158.632 48.014 1.00 50.96 P
ATOM 3 OP1 G B 51 55.806 158.037 48.189 1.00 52.44 O
ATOM 4 OP2 G B 51 54.125 159.341 46.747 1.00 49.27 O
ATOM 5 O5' G B 51 53.382 157.498 48.288 1.00 51.10 O
ATOM 6 C5' G B 51 53.437 156.721 49.493 1.00 50.60 C
ATOM 7 C4' G B 51 52.376 155.647 49.480 1.00 49.84 C
ATOM 8 O4' G B 51 51.065 156.257 49.539 1.00 49.43 O
ATOM 9 C3' G B 51 52.334 154.775 48.240 1.00 49.23 C
ATOM 10 O3' G B 51 53.296 153.730 48.309 1.00 49.37 O
ATOM 11 C2' G B 51 50.901 154.265 48.260 1.00 49.58 C
ATOM 12 O2' G B 51 50.700 153.201 49.164 1.00 50.14 O
ATOM 13 C1' G B 51 50.154 155.499 48.767 1.00 49.84 C
ATOM 14 N9 G B 51 49.663 156.348 47.688 1.00 50.99 N
ATOM 15 C8 G B 51 50.102 157.606 47.352 1.00 51.10 C
ATOM 16 N7 G B 51 49.470 158.112 46.330 1.00 51.97 N
ATOM 17 C5 G B 51 48.562 157.128 45.968 1.00 51.86 C
ATOM 18 C6 G B 51 47.616 157.095 44.917 1.00 51.96 C
ATOM 19 O6 G B 51 47.383 157.955 44.060 1.00 52.30 O
ATOM 20 N1 G B 51 46.907 155.900 44.910 1.00 51.87 N
ATOM 21 C2 G B 51 47.091 154.868 45.793 1.00 52.20 C
ATOM 22 N2 G B 51 46.321 153.789 45.614 1.00 53.43 N
ATOM 23 N3 G B 51 47.968 154.887 46.774 1.00 51.86 N
ATOM 24 C4 G B 51 48.666 156.037 46.802 1.00 51.22 C
ATOM 25 P C B 52 54.004 153.210 46.965 1.00 51.34 P
ATOM 26 OP1 C B 52 54.953 152.142 47.358 1.00 50.96 O
ATOM 27 OP2 C B 52 54.500 154.383 46.202 1.00 52.62 O
ATOM 28 O5' C B 52 52.810 152.546 46.145 1.00 50.98 O
TER
ATOM 2 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G A 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G A 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G A 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G A 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G A 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G A 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G A 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G A 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G A 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G A 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G A 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G A 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G A 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G A 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G A 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G A 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G A 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G A 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G A 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C A 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C A 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C A 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C A 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 1 O3' A B 50 54.244 159.647 49.225 1.00 49.24 O
ATOM 2 P G B 51 54.461 158.632 48.014 1.00 50.96 P
ATOM 3 OP1 G B 51 55.806 158.037 48.189 1.00 52.44 O
ATOM 4 OP2 G B 51 54.125 159.341 46.747 1.00 49.27 O
ATOM 5 O5' G B 51 53.382 157.498 48.288 1.00 51.10 O
ATOM 6 C5' G B 51 53.437 156.721 49.493 1.00 50.60 C
ATOM 7 C4' G B 51 52.376 155.647 49.480 1.00 49.84 C
ATOM 8 O4' G B 51 51.065 156.257 49.539 1.00 49.43 O
ATOM 9 C3' G B 51 52.334 154.775 48.240 1.00 49.23 C
ATOM 10 O3' G B 51 53.296 153.730 48.309 1.00 49.37 O
ATOM 11 C2' G B 51 50.901 154.265 48.260 1.00 49.58 C
ATOM 12 O2' G B 51 50.700 153.201 49.164 1.00 50.14 O
ATOM 13 C1' G B 51 50.154 155.499 48.767 1.00 49.84 C
ATOM 14 N9 G B 51 49.663 156.348 47.688 1.00 50.99 N
ATOM 15 C8 G B 51 50.102 157.606 47.352 1.00 51.10 C
ATOM 16 N7 G B 51 49.470 158.112 46.330 1.00 51.97 N
ATOM 17 C5 G B 51 48.562 157.128 45.968 1.00 51.86 C
ATOM 18 C6 G B 51 47.616 157.095 44.917 1.00 51.96 C
ATOM 19 O6 G B 51 47.383 157.955 44.060 1.00 52.30 O
ATOM 20 N1 G B 51 46.907 155.900 44.910 1.00 51.87 N
ATOM 21 C2 G B 51 47.091 154.868 45.793 1.00 52.20 C
ATOM 22 N2 G B 51 46.321 153.789 45.614 1.00 53.43 N
ATOM 23 N3 G B 51 47.968 154.887 46.774 1.00 51.86 N
ATOM 24 C4 G B 51 48.666 156.037 46.802 1.00 51.22 C
ATOM 25 P C B 52 54.004 153.210 46.965 1.00 51.34 P
ATOM 26 OP1 C B 52 54.953 152.142 47.358 1.00 50.96 O
ATOM 27 OP2 C B 52 54.500 154.383 46.202 1.00 52.62 O
ATOM 28 O5' C B 52 52.810 152.546 46.145 1.00 50.98 O
TER
Atoms:
OP1: (54.244,167.767,36.040)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP1: (55.806,158.037,48.189)
OP2: (54.125,159.341,46.747)
C3': (52.334,154.775,48.240)
C1': (50.154,155.499,48.767)
C5': (53.437,156.721,49.493)
O6: (47.383,157.955,44.060)
O4': (51.065,156.257,49.539)
C8: (50.102,157.606,47.352)
C2: (47.091,154.868,45.793)
C6: (47.616,157.095,44.917)
C5: (48.562,157.128,45.968)
C4: (48.666,156.037,46.802)
P: (54.461,158.632,48.014)
C4': (52.376,155.647,49.480)
C2': (50.901,154.265,48.260)
O2': (50.700,153.201,49.164)
N1: (46.907,155.900,44.910)
N2: (46.321,153.789,45.614)
N3: (47.968,154.887,46.774)
N7: (49.470,158.112,46.330)
N9: (49.663,156.348,47.688)
O5': (53.382,157.498,48.288)
O3': (53.296,153.730,48.309)
OP2: (54.125,159.341,46.747)
C3': (52.334,154.775,48.240)
C1': (50.154,155.499,48.767)
C5': (53.437,156.721,49.493)
O6: (47.383,157.955,44.060)
O4': (51.065,156.257,49.539)
C8: (50.102,157.606,47.352)
C2: (47.091,154.868,45.793)
C6: (47.616,157.095,44.917)
C5: (48.562,157.128,45.968)
C4: (48.666,156.037,46.802)
P: (54.461,158.632,48.014)
C4': (52.376,155.647,49.480)
C2': (50.901,154.265,48.260)
O2': (50.700,153.201,49.164)
N1: (46.907,155.900,44.910)
N2: (46.321,153.789,45.614)
N3: (47.968,154.887,46.774)
N7: (49.470,158.112,46.330)
N9: (49.663,156.348,47.688)
O5': (53.382,157.498,48.288)
O3': (53.296,153.730,48.309)
Image (generated by PyMOL):