Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01061:01206
Extra
PDB:
ATOM 1 O3' U A1060 18.564 105.406 123.874 1.00 45.47 O
ATOM 2 P C A1061 19.002 105.123 125.386 1.00 44.99 P
ATOM 3 OP1 C A1061 20.414 104.679 125.381 1.00 46.98 O
ATOM 4 OP2 C A1061 17.968 104.236 125.960 1.00 44.20 O
ATOM 5 O5' C A1061 18.938 106.560 126.070 1.00 41.73 O
ATOM 6 C5' C A1061 17.707 107.077 126.590 1.00 41.01 C
ATOM 7 C4' C A1061 17.863 108.535 126.924 1.00 41.62 C
ATOM 8 O4' C A1061 18.971 108.680 127.844 1.00 41.96 O
ATOM 9 C3' C A1061 18.240 109.434 125.761 1.00 42.83 C
ATOM 10 O3' C A1061 17.101 109.823 125.001 1.00 46.11 O
ATOM 11 C2' C A1061 18.917 110.603 126.461 1.00 41.60 C
ATOM 12 O2' C A1061 18.012 111.501 127.068 1.00 41.15 O
ATOM 13 C1' C A1061 19.683 109.875 127.560 1.00 40.37 C
ATOM 14 N1 C A1061 21.070 109.520 127.189 1.00 39.95 N
ATOM 15 C2 C A1061 22.036 110.530 127.141 1.00 39.81 C
ATOM 16 O2 C A1061 21.702 111.693 127.396 1.00 41.53 O
ATOM 17 N3 C A1061 23.309 110.212 126.826 1.00 39.08 N
ATOM 18 C4 C A1061 23.639 108.947 126.585 1.00 38.09 C
ATOM 19 N4 C A1061 24.915 108.678 126.323 1.00 38.61 N
ATOM 20 C5 C A1061 22.678 107.901 126.612 1.00 38.39 C
ATOM 21 C6 C A1061 21.416 108.227 126.908 1.00 38.79 C
ATOM 22 P C A1062 17.282 110.245 123.465 1.00 47.67 P
ATOM 23 OP1 C A1062 15.940 110.397 122.860 1.00 47.09 O
ATOM 24 OP2 C A1062 18.253 109.296 122.861 1.00 48.40 O
ATOM 25 O5' C A1062 17.952 111.684 123.559 1.00 43.85 O
TER
ATOM 1 O3' A B1205 22.332 104.369 133.344 1.00 51.12 O
ATOM 2 P A B1206 20.925 104.527 132.592 1.00 52.02 P
ATOM 3 OP1 A B1206 20.248 105.716 133.192 1.00 51.23 O
ATOM 4 OP2 A B1206 20.215 103.210 132.550 1.00 48.24 O
ATOM 5 O5' A B1206 21.367 104.913 131.109 1.00 48.89 O
ATOM 6 C5' A B1206 21.910 103.923 130.215 1.00 44.33 C
ATOM 7 C4' A B1206 23.216 104.400 129.635 1.00 40.49 C
ATOM 8 O4' A B1206 23.042 105.766 129.174 1.00 40.02 O
ATOM 9 C3' A B1206 24.416 104.427 130.577 1.00 39.98 C
ATOM 10 O3' A B1206 25.594 104.203 129.811 1.00 41.58 O
ATOM 11 C2' A B1206 24.425 105.872 131.058 1.00 40.32 C
ATOM 12 O2' A B1206 25.698 106.333 131.470 1.00 40.09 O
ATOM 13 C1' A B1206 23.997 106.601 129.790 1.00 39.89 C
ATOM 14 N9 A B1206 23.376 107.892 130.053 1.00 39.84 N
ATOM 15 C8 A B1206 22.084 108.143 130.434 1.00 39.84 C
ATOM 16 N7 A B1206 21.820 109.413 130.593 1.00 40.57 N
ATOM 17 C5 A B1206 23.019 110.043 130.298 1.00 40.26 C
ATOM 18 C6 A B1206 23.393 111.392 130.275 1.00 39.65 C
ATOM 19 N6 A B1206 22.568 112.392 130.589 1.00 39.16 N
ATOM 20 N1 A B1206 24.663 111.686 129.918 1.00 40.55 N
ATOM 21 C2 A B1206 25.494 110.682 129.620 1.00 41.06 C
ATOM 22 N3 A B1206 25.262 109.372 129.618 1.00 42.72 N
ATOM 23 C4 A B1206 23.988 109.117 129.966 1.00 40.94 C
ATOM 24 P A B1207 25.991 102.716 129.363 1.00 43.92 P
ATOM 25 OP1 A B1207 26.317 102.771 127.911 1.00 41.54 O
ATOM 26 OP2 A B1207 24.965 101.761 129.850 1.00 42.92 O
ATOM 27 O5' A B1207 27.334 102.425 130.165 1.00 46.39 O
TER
ATOM 2 P C A1061 19.002 105.123 125.386 1.00 44.99 P
ATOM 3 OP1 C A1061 20.414 104.679 125.381 1.00 46.98 O
ATOM 4 OP2 C A1061 17.968 104.236 125.960 1.00 44.20 O
ATOM 5 O5' C A1061 18.938 106.560 126.070 1.00 41.73 O
ATOM 6 C5' C A1061 17.707 107.077 126.590 1.00 41.01 C
ATOM 7 C4' C A1061 17.863 108.535 126.924 1.00 41.62 C
ATOM 8 O4' C A1061 18.971 108.680 127.844 1.00 41.96 O
ATOM 9 C3' C A1061 18.240 109.434 125.761 1.00 42.83 C
ATOM 10 O3' C A1061 17.101 109.823 125.001 1.00 46.11 O
ATOM 11 C2' C A1061 18.917 110.603 126.461 1.00 41.60 C
ATOM 12 O2' C A1061 18.012 111.501 127.068 1.00 41.15 O
ATOM 13 C1' C A1061 19.683 109.875 127.560 1.00 40.37 C
ATOM 14 N1 C A1061 21.070 109.520 127.189 1.00 39.95 N
ATOM 15 C2 C A1061 22.036 110.530 127.141 1.00 39.81 C
ATOM 16 O2 C A1061 21.702 111.693 127.396 1.00 41.53 O
ATOM 17 N3 C A1061 23.309 110.212 126.826 1.00 39.08 N
ATOM 18 C4 C A1061 23.639 108.947 126.585 1.00 38.09 C
ATOM 19 N4 C A1061 24.915 108.678 126.323 1.00 38.61 N
ATOM 20 C5 C A1061 22.678 107.901 126.612 1.00 38.39 C
ATOM 21 C6 C A1061 21.416 108.227 126.908 1.00 38.79 C
ATOM 22 P C A1062 17.282 110.245 123.465 1.00 47.67 P
ATOM 23 OP1 C A1062 15.940 110.397 122.860 1.00 47.09 O
ATOM 24 OP2 C A1062 18.253 109.296 122.861 1.00 48.40 O
ATOM 25 O5' C A1062 17.952 111.684 123.559 1.00 43.85 O
TER
ATOM 1 O3' A B1205 22.332 104.369 133.344 1.00 51.12 O
ATOM 2 P A B1206 20.925 104.527 132.592 1.00 52.02 P
ATOM 3 OP1 A B1206 20.248 105.716 133.192 1.00 51.23 O
ATOM 4 OP2 A B1206 20.215 103.210 132.550 1.00 48.24 O
ATOM 5 O5' A B1206 21.367 104.913 131.109 1.00 48.89 O
ATOM 6 C5' A B1206 21.910 103.923 130.215 1.00 44.33 C
ATOM 7 C4' A B1206 23.216 104.400 129.635 1.00 40.49 C
ATOM 8 O4' A B1206 23.042 105.766 129.174 1.00 40.02 O
ATOM 9 C3' A B1206 24.416 104.427 130.577 1.00 39.98 C
ATOM 10 O3' A B1206 25.594 104.203 129.811 1.00 41.58 O
ATOM 11 C2' A B1206 24.425 105.872 131.058 1.00 40.32 C
ATOM 12 O2' A B1206 25.698 106.333 131.470 1.00 40.09 O
ATOM 13 C1' A B1206 23.997 106.601 129.790 1.00 39.89 C
ATOM 14 N9 A B1206 23.376 107.892 130.053 1.00 39.84 N
ATOM 15 C8 A B1206 22.084 108.143 130.434 1.00 39.84 C
ATOM 16 N7 A B1206 21.820 109.413 130.593 1.00 40.57 N
ATOM 17 C5 A B1206 23.019 110.043 130.298 1.00 40.26 C
ATOM 18 C6 A B1206 23.393 111.392 130.275 1.00 39.65 C
ATOM 19 N6 A B1206 22.568 112.392 130.589 1.00 39.16 N
ATOM 20 N1 A B1206 24.663 111.686 129.918 1.00 40.55 N
ATOM 21 C2 A B1206 25.494 110.682 129.620 1.00 41.06 C
ATOM 22 N3 A B1206 25.262 109.372 129.618 1.00 42.72 N
ATOM 23 C4 A B1206 23.988 109.117 129.966 1.00 40.94 C
ATOM 24 P A B1207 25.991 102.716 129.363 1.00 43.92 P
ATOM 25 OP1 A B1207 26.317 102.771 127.911 1.00 41.54 O
ATOM 26 OP2 A B1207 24.965 101.761 129.850 1.00 42.92 O
ATOM 27 O5' A B1207 27.334 102.425 130.165 1.00 46.39 O
TER
Atoms:
C2: (22.036,110.530,127.141)
OP1: (20.414,104.679,125.381)
OP2: (17.968,104.236,125.960)
C4: (23.639,108.947,126.585)
O5': (18.938,106.560,126.070)
C3': (18.240,109.434,125.761)
C1': (19.683,109.875,127.560)
O4': (18.971,108.680,127.844)
C5': (17.707,107.077,126.590)
P: (19.002,105.123,125.386)
O2: (21.702,111.693,127.396)
C4': (17.863,108.535,126.924)
C2': (18.917,110.603,126.461)
O2': (18.012,111.501,127.068)
N1: (21.070,109.520,127.189)
N3: (23.309,110.212,126.826)
N4: (24.915,108.678,126.323)
C6: (21.416,108.227,126.908)
C5: (22.678,107.901,126.612)
O3': (17.101,109.823,125.001)
OP1: (20.414,104.679,125.381)
OP2: (17.968,104.236,125.960)
C4: (23.639,108.947,126.585)
O5': (18.938,106.560,126.070)
C3': (18.240,109.434,125.761)
C1': (19.683,109.875,127.560)
O4': (18.971,108.680,127.844)
C5': (17.707,107.077,126.590)
P: (19.002,105.123,125.386)
O2: (21.702,111.693,127.396)
C4': (17.863,108.535,126.924)
C2': (18.917,110.603,126.461)
O2': (18.012,111.501,127.068)
N1: (21.070,109.520,127.189)
N3: (23.309,110.212,126.826)
N4: (24.915,108.678,126.323)
C6: (21.416,108.227,126.908)
C5: (22.678,107.901,126.612)
O3': (17.101,109.823,125.001)
OP1: (20.248,105.716,133.192)
OP2: (20.215,103.210,132.550)
C3': (24.416,104.427,130.577)
C1': (23.997,106.601,129.790)
C5': (21.910,103.923,130.215)
O4': (23.042,105.766,129.174)
C8: (22.084,108.143,130.434)
O2': (25.698,106.333,131.470)
C6: (23.393,111.392,130.275)
C5: (23.019,110.043,130.298)
C4: (23.988,109.117,129.966)
P: (20.925,104.527,132.592)
C4': (23.216,104.400,129.635)
C2': (24.425,105.872,131.058)
C2: (25.494,110.682,129.620)
N1: (24.663,111.686,129.918)
N3: (25.262,109.372,129.618)
N6: (22.568,112.392,130.589)
N7: (21.820,109.413,130.593)
N9: (23.376,107.892,130.053)
O5': (21.367,104.913,131.109)
O3': (25.594,104.203,129.811)
OP2: (20.215,103.210,132.550)
C3': (24.416,104.427,130.577)
C1': (23.997,106.601,129.790)
C5': (21.910,103.923,130.215)
O4': (23.042,105.766,129.174)
C8: (22.084,108.143,130.434)
O2': (25.698,106.333,131.470)
C6: (23.393,111.392,130.275)
C5: (23.019,110.043,130.298)
C4: (23.988,109.117,129.966)
P: (20.925,104.527,132.592)
C4': (23.216,104.400,129.635)
C2': (24.425,105.872,131.058)
C2: (25.494,110.682,129.620)
N1: (24.663,111.686,129.918)
N3: (25.262,109.372,129.618)
N6: (22.568,112.392,130.589)
N7: (21.820,109.413,130.593)
N9: (23.376,107.892,130.053)
O5': (21.367,104.913,131.109)
O3': (25.594,104.203,129.811)
Image (generated by PyMOL):