Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A655:A2254
Extra
PDB:
ATOM 1 O3' A A 654 129.518 -49.147 -79.836 1.00 75.55 O
ATOM 2 P A A 655 128.919 -50.605 -79.486 1.00 63.65 P
ATOM 3 OP1 A A 655 128.191 -51.089 -80.676 1.00 64.50 O
ATOM 4 OP2 A A 655 128.197 -50.474 -78.200 1.00 66.38 O
ATOM 5 O5' A A 655 130.197 -51.540 -79.295 1.00 80.09 O
ATOM 6 C5' A A 655 130.826 -52.171 -80.415 1.00 84.09 C
ATOM 7 C4' A A 655 131.846 -53.188 -79.950 1.00 83.62 C
ATOM 8 O4' A A 655 132.691 -52.549 -78.967 1.00 74.16 O
ATOM 9 C3' A A 655 131.309 -54.443 -79.269 1.00 89.57 C
ATOM 10 O3' A A 655 131.071 -55.489 -80.222 1.00100.88 O
ATOM 11 C2' A A 655 132.451 -54.828 -78.335 1.00 87.96 C
ATOM 12 O2' A A 655 133.451 -55.573 -78.993 1.00 92.42 O
ATOM 13 C1' A A 655 133.021 -53.464 -77.951 1.00 82.97 C
ATOM 14 N9 A A 655 132.500 -52.936 -76.691 1.00 80.56 N
ATOM 15 C8 A A 655 131.341 -52.226 -76.491 1.00 85.22 C
ATOM 16 N7 A A 655 131.164 -51.839 -75.251 1.00 84.66 N
ATOM 17 C5 A A 655 132.277 -52.332 -74.586 1.00 82.74 C
ATOM 18 C6 A A 655 132.699 -52.243 -73.246 1.00 83.28 C
ATOM 19 N6 A A 655 132.029 -51.598 -72.289 1.00 79.40 N
ATOM 20 N1 A A 655 133.857 -52.846 -72.917 1.00 81.25 N
ATOM 21 C2 A A 655 134.535 -53.495 -73.867 1.00 79.61 C
ATOM 22 N3 A A 655 134.247 -53.649 -75.153 1.00 80.35 N
ATOM 23 C4 A A 655 133.096 -53.030 -75.456 1.00 77.86 C
ATOM 24 P C A 656 129.751 -56.430 -80.115 1.00113.26 P
ATOM 25 OP1 C A 656 129.271 -56.653 -81.510 1.00108.97 O
ATOM 26 OP2 C A 656 128.810 -55.898 -79.097 1.00101.49 O
ATOM 27 O5' C A 656 130.262 -57.840 -79.560 1.00109.75 O
TER
ATOM 1 O3' U B2253 128.272 -44.092 -67.557 1.00 67.99 O
ATOM 2 P G B2254 127.370 -45.231 -66.861 1.00 66.04 P
ATOM 3 OP1 G B2254 125.942 -44.814 -66.952 1.00 69.28 O
ATOM 4 OP2 G B2254 127.974 -45.531 -65.529 1.00 59.30 O
ATOM 5 O5' G B2254 127.565 -46.510 -67.788 1.00 67.38 O
ATOM 6 C5' G B2254 128.784 -47.212 -67.757 1.00 67.47 C
ATOM 7 C4' G B2254 129.045 -47.889 -69.067 1.00 68.53 C
ATOM 8 O4' G B2254 130.405 -47.582 -69.446 1.00 71.98 O
ATOM 9 C3' G B2254 128.966 -49.402 -68.960 1.00 68.31 C
ATOM 10 O3' G B2254 127.678 -49.865 -69.329 1.00 65.25 O
ATOM 11 C2' G B2254 130.087 -49.866 -69.876 1.00 73.74 C
ATOM 12 O2' G B2254 129.715 -49.839 -71.237 1.00 79.88 O
ATOM 13 C1' G B2254 131.130 -48.775 -69.635 1.00 72.60 C
ATOM 14 N9 G B2254 131.920 -49.003 -68.426 1.00 69.83 N
ATOM 15 C8 G B2254 131.818 -48.317 -67.241 1.00 67.29 C
ATOM 16 N7 G B2254 132.624 -48.762 -66.320 1.00 71.79 N
ATOM 17 C5 G B2254 133.305 -49.806 -66.929 1.00 72.71 C
ATOM 18 C6 G B2254 134.304 -50.680 -66.416 1.00 71.14 C
ATOM 19 O6 G B2254 134.769 -50.737 -65.265 1.00 67.08 O
ATOM 20 N1 G B2254 134.753 -51.568 -67.386 1.00 70.56 N
ATOM 21 C2 G B2254 134.293 -51.632 -68.676 1.00 71.25 C
ATOM 22 N2 G B2254 134.879 -52.554 -69.461 1.00 73.04 N
ATOM 23 N3 G B2254 133.339 -50.846 -69.161 1.00 72.88 N
ATOM 24 C4 G B2254 132.896 -49.958 -68.238 1.00 71.82 C
ATOM 25 P C B2255 126.637 -50.288 -68.185 1.00 64.76 P
ATOM 26 OP1 C B2255 125.298 -50.473 -68.783 1.00 77.48 O
ATOM 27 OP2 C B2255 126.814 -49.301 -67.095 1.00 74.21 O
ATOM 28 O5' C B2255 127.154 -51.713 -67.687 1.00 63.44 O
TER
ATOM 2 P A A 655 128.919 -50.605 -79.486 1.00 63.65 P
ATOM 3 OP1 A A 655 128.191 -51.089 -80.676 1.00 64.50 O
ATOM 4 OP2 A A 655 128.197 -50.474 -78.200 1.00 66.38 O
ATOM 5 O5' A A 655 130.197 -51.540 -79.295 1.00 80.09 O
ATOM 6 C5' A A 655 130.826 -52.171 -80.415 1.00 84.09 C
ATOM 7 C4' A A 655 131.846 -53.188 -79.950 1.00 83.62 C
ATOM 8 O4' A A 655 132.691 -52.549 -78.967 1.00 74.16 O
ATOM 9 C3' A A 655 131.309 -54.443 -79.269 1.00 89.57 C
ATOM 10 O3' A A 655 131.071 -55.489 -80.222 1.00100.88 O
ATOM 11 C2' A A 655 132.451 -54.828 -78.335 1.00 87.96 C
ATOM 12 O2' A A 655 133.451 -55.573 -78.993 1.00 92.42 O
ATOM 13 C1' A A 655 133.021 -53.464 -77.951 1.00 82.97 C
ATOM 14 N9 A A 655 132.500 -52.936 -76.691 1.00 80.56 N
ATOM 15 C8 A A 655 131.341 -52.226 -76.491 1.00 85.22 C
ATOM 16 N7 A A 655 131.164 -51.839 -75.251 1.00 84.66 N
ATOM 17 C5 A A 655 132.277 -52.332 -74.586 1.00 82.74 C
ATOM 18 C6 A A 655 132.699 -52.243 -73.246 1.00 83.28 C
ATOM 19 N6 A A 655 132.029 -51.598 -72.289 1.00 79.40 N
ATOM 20 N1 A A 655 133.857 -52.846 -72.917 1.00 81.25 N
ATOM 21 C2 A A 655 134.535 -53.495 -73.867 1.00 79.61 C
ATOM 22 N3 A A 655 134.247 -53.649 -75.153 1.00 80.35 N
ATOM 23 C4 A A 655 133.096 -53.030 -75.456 1.00 77.86 C
ATOM 24 P C A 656 129.751 -56.430 -80.115 1.00113.26 P
ATOM 25 OP1 C A 656 129.271 -56.653 -81.510 1.00108.97 O
ATOM 26 OP2 C A 656 128.810 -55.898 -79.097 1.00101.49 O
ATOM 27 O5' C A 656 130.262 -57.840 -79.560 1.00109.75 O
TER
ATOM 1 O3' U B2253 128.272 -44.092 -67.557 1.00 67.99 O
ATOM 2 P G B2254 127.370 -45.231 -66.861 1.00 66.04 P
ATOM 3 OP1 G B2254 125.942 -44.814 -66.952 1.00 69.28 O
ATOM 4 OP2 G B2254 127.974 -45.531 -65.529 1.00 59.30 O
ATOM 5 O5' G B2254 127.565 -46.510 -67.788 1.00 67.38 O
ATOM 6 C5' G B2254 128.784 -47.212 -67.757 1.00 67.47 C
ATOM 7 C4' G B2254 129.045 -47.889 -69.067 1.00 68.53 C
ATOM 8 O4' G B2254 130.405 -47.582 -69.446 1.00 71.98 O
ATOM 9 C3' G B2254 128.966 -49.402 -68.960 1.00 68.31 C
ATOM 10 O3' G B2254 127.678 -49.865 -69.329 1.00 65.25 O
ATOM 11 C2' G B2254 130.087 -49.866 -69.876 1.00 73.74 C
ATOM 12 O2' G B2254 129.715 -49.839 -71.237 1.00 79.88 O
ATOM 13 C1' G B2254 131.130 -48.775 -69.635 1.00 72.60 C
ATOM 14 N9 G B2254 131.920 -49.003 -68.426 1.00 69.83 N
ATOM 15 C8 G B2254 131.818 -48.317 -67.241 1.00 67.29 C
ATOM 16 N7 G B2254 132.624 -48.762 -66.320 1.00 71.79 N
ATOM 17 C5 G B2254 133.305 -49.806 -66.929 1.00 72.71 C
ATOM 18 C6 G B2254 134.304 -50.680 -66.416 1.00 71.14 C
ATOM 19 O6 G B2254 134.769 -50.737 -65.265 1.00 67.08 O
ATOM 20 N1 G B2254 134.753 -51.568 -67.386 1.00 70.56 N
ATOM 21 C2 G B2254 134.293 -51.632 -68.676 1.00 71.25 C
ATOM 22 N2 G B2254 134.879 -52.554 -69.461 1.00 73.04 N
ATOM 23 N3 G B2254 133.339 -50.846 -69.161 1.00 72.88 N
ATOM 24 C4 G B2254 132.896 -49.958 -68.238 1.00 71.82 C
ATOM 25 P C B2255 126.637 -50.288 -68.185 1.00 64.76 P
ATOM 26 OP1 C B2255 125.298 -50.473 -68.783 1.00 77.48 O
ATOM 27 OP2 C B2255 126.814 -49.301 -67.095 1.00 74.21 O
ATOM 28 O5' C B2255 127.154 -51.713 -67.687 1.00 63.44 O
TER
Atoms:
OP1: (128.191,-51.089,-80.676)
OP2: (128.197,-50.474,-78.200)
C3': (131.309,-54.443,-79.269)
C1': (133.021,-53.464,-77.951)
C5': (130.826,-52.171,-80.415)
O4': (132.691,-52.549,-78.967)
C8: (131.341,-52.226,-76.491)
O2': (133.451,-55.573,-78.993)
C6: (132.699,-52.243,-73.246)
C5: (132.277,-52.332,-74.586)
C4: (133.096,-53.030,-75.456)
P: (128.919,-50.605,-79.486)
C4': (131.846,-53.188,-79.950)
C2': (132.451,-54.828,-78.335)
C2: (134.535,-53.495,-73.867)
N1: (133.857,-52.846,-72.917)
N3: (134.247,-53.649,-75.153)
N6: (132.029,-51.598,-72.289)
N7: (131.164,-51.839,-75.251)
N9: (132.500,-52.936,-76.691)
O5': (130.197,-51.540,-79.295)
O3': (131.071,-55.489,-80.222)
OP2: (128.197,-50.474,-78.200)
C3': (131.309,-54.443,-79.269)
C1': (133.021,-53.464,-77.951)
C5': (130.826,-52.171,-80.415)
O4': (132.691,-52.549,-78.967)
C8: (131.341,-52.226,-76.491)
O2': (133.451,-55.573,-78.993)
C6: (132.699,-52.243,-73.246)
C5: (132.277,-52.332,-74.586)
C4: (133.096,-53.030,-75.456)
P: (128.919,-50.605,-79.486)
C4': (131.846,-53.188,-79.950)
C2': (132.451,-54.828,-78.335)
C2: (134.535,-53.495,-73.867)
N1: (133.857,-52.846,-72.917)
N3: (134.247,-53.649,-75.153)
N6: (132.029,-51.598,-72.289)
N7: (131.164,-51.839,-75.251)
N9: (132.500,-52.936,-76.691)
O5': (130.197,-51.540,-79.295)
O3': (131.071,-55.489,-80.222)
OP1: (125.942,-44.814,-66.952)
OP2: (127.974,-45.531,-65.529)
C3': (128.966,-49.402,-68.960)
C1': (131.130,-48.775,-69.635)
C5': (128.784,-47.212,-67.757)
O6: (134.769,-50.737,-65.265)
O4': (130.405,-47.582,-69.446)
C8: (131.818,-48.317,-67.241)
C2: (134.293,-51.632,-68.676)
C6: (134.304,-50.680,-66.416)
C5: (133.305,-49.806,-66.929)
C4: (132.896,-49.958,-68.238)
P: (127.370,-45.231,-66.861)
C4': (129.045,-47.889,-69.067)
C2': (130.087,-49.866,-69.876)
O2': (129.715,-49.839,-71.237)
N1: (134.753,-51.568,-67.386)
N2: (134.879,-52.554,-69.461)
N3: (133.339,-50.846,-69.161)
N7: (132.624,-48.762,-66.320)
N9: (131.920,-49.003,-68.426)
O5': (127.565,-46.510,-67.788)
O3': (127.678,-49.865,-69.329)
OP2: (127.974,-45.531,-65.529)
C3': (128.966,-49.402,-68.960)
C1': (131.130,-48.775,-69.635)
C5': (128.784,-47.212,-67.757)
O6: (134.769,-50.737,-65.265)
O4': (130.405,-47.582,-69.446)
C8: (131.818,-48.317,-67.241)
C2: (134.293,-51.632,-68.676)
C6: (134.304,-50.680,-66.416)
C5: (133.305,-49.806,-66.929)
C4: (132.896,-49.958,-68.238)
P: (127.370,-45.231,-66.861)
C4': (129.045,-47.889,-69.067)
C2': (130.087,-49.866,-69.876)
O2': (129.715,-49.839,-71.237)
N1: (134.753,-51.568,-67.386)
N2: (134.879,-52.554,-69.461)
N3: (133.339,-50.846,-69.161)
N7: (132.624,-48.762,-66.320)
N9: (131.920,-49.003,-68.426)
O5': (127.565,-46.510,-67.788)
O3': (127.678,-49.865,-69.329)
Image (generated by PyMOL):