Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A325:A302
Extra
PDB:
ATOM 1 O3' G A 324 16.492 145.262 46.912 1.00 50.69 O
ATOM 2 P A A 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A A 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A A 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A A 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A A 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A A 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A A 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A A 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A A 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A A 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A A 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A A 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A A 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A A 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A A 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A A 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A A 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A A 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A A 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A A 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A A 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A A 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C A 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C A 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C A 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C A 326 15.668 136.235 45.343 1.00 54.23 O
TER
ATOM 1 O3' U B 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 2 P G B 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 3 OP1 G B 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 4 OP2 G B 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 5 O5' G B 302 3.154 146.447 52.714 1.00 59.77 O
ATOM 6 C5' G B 302 4.167 145.830 53.522 1.00 57.65 C
ATOM 7 C4' G B 302 5.484 145.814 52.784 1.00 56.86 C
ATOM 8 O4' G B 302 5.342 145.074 51.545 1.00 56.80 O
ATOM 9 C3' G B 302 5.999 147.167 52.326 1.00 56.24 C
ATOM 10 O3' G B 302 6.677 147.862 53.358 1.00 56.34 O
ATOM 11 C2' G B 302 6.971 146.768 51.239 1.00 56.29 C
ATOM 12 O2' G B 302 8.140 146.279 51.856 1.00 55.51 O
ATOM 13 C1' G B 302 6.199 145.633 50.559 1.00 57.88 C
ATOM 14 N9 G B 302 5.388 146.106 49.434 1.00 60.84 N
ATOM 15 C8 G B 302 4.097 146.588 49.465 1.00 62.12 C
ATOM 16 N7 G B 302 3.678 147.008 48.301 1.00 63.19 N
ATOM 17 C5 G B 302 4.750 146.779 47.447 1.00 63.43 C
ATOM 18 C6 G B 302 4.905 147.054 46.057 1.00 64.67 C
ATOM 19 O6 G B 302 4.107 147.598 45.277 1.00 66.81 O
ATOM 20 N1 G B 302 6.149 146.639 45.590 1.00 64.71 N
ATOM 21 C2 G B 302 7.125 146.050 46.354 1.00 64.41 C
ATOM 22 N2 G B 302 8.251 145.713 45.716 1.00 63.36 N
ATOM 23 N3 G B 302 7.003 145.807 47.647 1.00 63.96 N
ATOM 24 C4 G B 302 5.800 146.195 48.125 1.00 62.38 C
ATOM 25 P G B 303 6.541 149.456 53.458 1.00 56.93 P
ATOM 26 OP1 G B 303 7.297 149.963 54.639 1.00 57.67 O
ATOM 27 OP2 G B 303 5.101 149.716 53.353 1.00 59.12 O
ATOM 28 O5' G B 303 7.226 149.995 52.130 1.00 57.03 O
TER
ATOM 2 P A A 325 17.403 144.061 47.461 1.00 48.45 P
ATOM 3 OP1 A A 325 17.810 144.472 48.810 1.00 49.26 O
ATOM 4 OP2 A A 325 18.440 143.663 46.468 1.00 47.49 O
ATOM 5 O5' A A 325 16.369 142.873 47.654 1.00 48.70 O
ATOM 6 C5' A A 325 16.053 141.961 46.590 1.00 48.82 C
ATOM 7 C4' A A 325 15.634 140.645 47.193 1.00 49.82 C
ATOM 8 O4' A A 325 14.584 140.909 48.163 1.00 50.14 O
ATOM 9 C3' A A 325 15.099 139.537 46.291 1.00 50.67 C
ATOM 10 O3' A A 325 15.495 138.280 46.838 1.00 51.96 O
ATOM 11 C2' A A 325 13.589 139.654 46.477 1.00 49.82 C
ATOM 12 O2' A A 325 12.920 138.428 46.288 1.00 51.83 O
ATOM 13 C1' A A 325 13.505 140.030 47.949 1.00 48.99 C
ATOM 14 N9 A A 325 12.273 140.709 48.342 1.00 48.20 N
ATOM 15 C8 A A 325 11.415 140.335 49.339 1.00 48.17 C
ATOM 16 N7 A A 325 10.397 141.143 49.494 1.00 48.46 N
ATOM 17 C5 A A 325 10.602 142.123 48.538 1.00 49.21 C
ATOM 18 C6 A A 325 9.879 143.277 48.195 1.00 49.50 C
ATOM 19 N6 A A 325 8.780 143.683 48.836 1.00 49.01 N
ATOM 20 N1 A A 325 10.336 144.017 47.164 1.00 49.31 N
ATOM 21 C2 A A 325 11.455 143.627 46.545 1.00 49.39 C
ATOM 22 N3 A A 325 12.231 142.581 46.790 1.00 49.03 N
ATOM 23 C4 A A 325 11.744 141.859 47.808 1.00 48.73 C
ATOM 24 P C A 326 16.546 137.358 46.051 1.00 53.27 P
ATOM 25 OP1 C A 326 17.358 136.630 47.055 1.00 53.73 O
ATOM 26 OP2 C A 326 17.227 138.158 45.010 1.00 52.57 O
ATOM 27 O5' C A 326 15.668 136.235 45.343 1.00 54.23 O
TER
ATOM 1 O3' U B 301 1.120 145.016 53.117 1.00 59.34 O
ATOM 2 P G B 302 1.644 146.529 53.205 1.00 59.58 P
ATOM 3 OP1 G B 302 1.678 146.883 54.629 1.00 60.49 O
ATOM 4 OP2 G B 302 0.893 147.393 52.251 1.00 61.05 O
ATOM 5 O5' G B 302 3.154 146.447 52.714 1.00 59.77 O
ATOM 6 C5' G B 302 4.167 145.830 53.522 1.00 57.65 C
ATOM 7 C4' G B 302 5.484 145.814 52.784 1.00 56.86 C
ATOM 8 O4' G B 302 5.342 145.074 51.545 1.00 56.80 O
ATOM 9 C3' G B 302 5.999 147.167 52.326 1.00 56.24 C
ATOM 10 O3' G B 302 6.677 147.862 53.358 1.00 56.34 O
ATOM 11 C2' G B 302 6.971 146.768 51.239 1.00 56.29 C
ATOM 12 O2' G B 302 8.140 146.279 51.856 1.00 55.51 O
ATOM 13 C1' G B 302 6.199 145.633 50.559 1.00 57.88 C
ATOM 14 N9 G B 302 5.388 146.106 49.434 1.00 60.84 N
ATOM 15 C8 G B 302 4.097 146.588 49.465 1.00 62.12 C
ATOM 16 N7 G B 302 3.678 147.008 48.301 1.00 63.19 N
ATOM 17 C5 G B 302 4.750 146.779 47.447 1.00 63.43 C
ATOM 18 C6 G B 302 4.905 147.054 46.057 1.00 64.67 C
ATOM 19 O6 G B 302 4.107 147.598 45.277 1.00 66.81 O
ATOM 20 N1 G B 302 6.149 146.639 45.590 1.00 64.71 N
ATOM 21 C2 G B 302 7.125 146.050 46.354 1.00 64.41 C
ATOM 22 N2 G B 302 8.251 145.713 45.716 1.00 63.36 N
ATOM 23 N3 G B 302 7.003 145.807 47.647 1.00 63.96 N
ATOM 24 C4 G B 302 5.800 146.195 48.125 1.00 62.38 C
ATOM 25 P G B 303 6.541 149.456 53.458 1.00 56.93 P
ATOM 26 OP1 G B 303 7.297 149.963 54.639 1.00 57.67 O
ATOM 27 OP2 G B 303 5.101 149.716 53.353 1.00 59.12 O
ATOM 28 O5' G B 303 7.226 149.995 52.130 1.00 57.03 O
TER
Atoms:
OP1: (17.810,144.472,48.810)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
OP2: (18.440,143.663,46.468)
C3': (15.099,139.537,46.291)
C1': (13.505,140.030,47.949)
C5': (16.053,141.961,46.590)
O4': (14.584,140.909,48.163)
C8: (11.415,140.335,49.339)
O2': (12.920,138.428,46.288)
C6: (9.879,143.277,48.195)
C5: (10.602,142.123,48.538)
C4: (11.744,141.859,47.808)
P: (17.403,144.061,47.461)
C4': (15.634,140.645,47.193)
C2': (13.589,139.654,46.477)
C2: (11.455,143.627,46.545)
N1: (10.336,144.017,47.164)
N3: (12.231,142.581,46.790)
N6: (8.780,143.683,48.836)
N7: (10.397,141.143,49.494)
N9: (12.273,140.709,48.342)
O5': (16.369,142.873,47.654)
O3': (15.495,138.280,46.838)
OP1: (1.678,146.883,54.629)
OP2: (0.893,147.393,52.251)
C3': (5.999,147.167,52.326)
C1': (6.199,145.633,50.559)
C5': (4.167,145.830,53.522)
O6: (4.107,147.598,45.277)
O4': (5.342,145.074,51.545)
C8: (4.097,146.588,49.465)
C2: (7.125,146.050,46.354)
C6: (4.905,147.054,46.057)
C5: (4.750,146.779,47.447)
C4: (5.800,146.195,48.125)
P: (1.644,146.529,53.205)
C4': (5.484,145.814,52.784)
C2': (6.971,146.768,51.239)
O2': (8.140,146.279,51.856)
N1: (6.149,146.639,45.590)
N2: (8.251,145.713,45.716)
N3: (7.003,145.807,47.647)
N7: (3.678,147.008,48.301)
N9: (5.388,146.106,49.434)
O5': (3.154,146.447,52.714)
O3': (6.677,147.862,53.358)
OP2: (0.893,147.393,52.251)
C3': (5.999,147.167,52.326)
C1': (6.199,145.633,50.559)
C5': (4.167,145.830,53.522)
O6: (4.107,147.598,45.277)
O4': (5.342,145.074,51.545)
C8: (4.097,146.588,49.465)
C2: (7.125,146.050,46.354)
C6: (4.905,147.054,46.057)
C5: (4.750,146.779,47.447)
C4: (5.800,146.195,48.125)
P: (1.644,146.529,53.205)
C4': (5.484,145.814,52.784)
C2': (6.971,146.768,51.239)
O2': (8.140,146.279,51.856)
N1: (6.149,146.639,45.590)
N2: (8.251,145.713,45.716)
N3: (7.003,145.807,47.647)
N7: (3.678,147.008,48.301)
N9: (5.388,146.106,49.434)
O5': (3.154,146.447,52.714)
O3': (6.677,147.862,53.358)
Image (generated by PyMOL):