Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0617:02016
Extra
PDB:
ATOM 1 P A A 617 39.261 112.238 95.152 1.00 35.19 P
ATOM 2 OP1 A A 617 39.011 111.081 96.032 1.00 35.59 O
ATOM 3 OP2 A A 617 38.624 112.277 93.820 1.00 34.65 O
ATOM 4 O5' A A 617 38.945 113.584 95.958 1.00 35.27 O
ATOM 5 C5' A A 617 38.505 114.796 95.292 1.00 36.59 C
ATOM 6 C4' A A 617 39.075 116.024 95.987 1.00 38.36 C
ATOM 7 O4' A A 617 38.732 115.975 97.396 1.00 38.86 O
ATOM 8 C3' A A 617 40.593 116.166 95.980 1.00 38.77 C
ATOM 9 O3' A A 617 41.047 116.848 94.823 1.00 38.75 O
ATOM 10 C2' A A 617 40.854 117.027 97.203 1.00 39.08 C
ATOM 11 O2' A A 617 40.612 118.394 96.941 1.00 39.87 O
ATOM 12 C1' A A 617 39.800 116.501 98.172 1.00 39.42 C
ATOM 13 N9 A A 617 40.302 115.441 99.048 1.00 40.35 N
ATOM 14 C8 A A 617 39.920 114.118 99.066 1.00 41.20 C
ATOM 15 N7 A A 617 40.541 113.400 99.971 1.00 41.24 N
ATOM 16 C5 A A 617 41.387 114.308 100.591 1.00 41.07 C
ATOM 17 C6 A A 617 42.305 114.169 101.636 1.00 41.22 C
ATOM 18 N6 A A 617 42.527 113.014 102.271 1.00 41.81 N
ATOM 19 N1 A A 617 42.993 115.263 102.017 1.00 40.15 N
ATOM 20 C2 A A 617 42.760 116.414 101.385 1.00 40.66 C
ATOM 21 N3 A A 617 41.920 116.675 100.389 1.00 40.72 N
ATOM 22 C4 A A 617 41.255 115.566 100.032 1.00 40.27 C
ATOM 23 P A A 618 42.296 116.279 93.996 1.00 38.86 P
ATOM 24 OP1 A A 618 42.307 117.090 92.747 1.00 39.76 O
ATOM 25 OP2 A A 618 42.183 114.803 93.907 1.00 41.58 O
ATOM 26 O5' A A 618 43.582 116.577 94.904 1.00 39.98 O
TER
ATOM 1 O3' U B2015 42.271 108.169 109.484 1.00 36.66 O
ATOM 2 P G B2016 43.522 107.446 108.777 1.00 36.84 P
ATOM 3 OP1 G B2016 43.190 106.002 108.665 1.00 37.79 O
ATOM 4 OP2 G B2016 44.761 107.848 109.488 1.00 36.60 O
ATOM 5 O5' G B2016 43.543 108.080 107.314 1.00 37.31 O
ATOM 6 C5' G B2016 42.417 107.941 106.434 1.00 36.90 C
ATOM 7 C4' G B2016 42.532 108.904 105.283 1.00 37.75 C
ATOM 8 O4' G B2016 42.423 110.264 105.766 1.00 38.01 O
ATOM 9 C3' G B2016 43.862 108.877 104.563 1.00 38.25 C
ATOM 10 O3' G B2016 43.893 107.816 103.626 1.00 40.13 O
ATOM 11 C2' G B2016 43.902 110.250 103.908 1.00 38.13 C
ATOM 12 O2' G B2016 43.116 110.358 102.748 1.00 37.32 O
ATOM 13 C1' G B2016 43.260 111.112 104.992 1.00 38.62 C
ATOM 14 N9 G B2016 44.261 111.705 105.871 1.00 38.96 N
ATOM 15 C8 G B2016 44.832 111.133 106.980 1.00 39.07 C
ATOM 16 N7 G B2016 45.713 111.904 107.555 1.00 38.97 N
ATOM 17 C5 G B2016 45.723 113.052 106.780 1.00 37.83 C
ATOM 18 C6 G B2016 46.483 114.230 106.910 1.00 38.08 C
ATOM 19 O6 G B2016 47.338 114.502 107.761 1.00 37.68 O
ATOM 20 N1 G B2016 46.176 115.150 105.912 1.00 37.70 N
ATOM 21 C2 G B2016 45.261 114.950 104.917 1.00 37.62 C
ATOM 22 N2 G B2016 45.097 115.955 104.055 1.00 37.63 N
ATOM 23 N3 G B2016 44.554 113.846 104.777 1.00 38.21 N
ATOM 24 C4 G B2016 44.831 112.947 105.739 1.00 37.84 C
ATOM 25 P C B2017 45.207 106.897 103.498 1.00 42.05 P
ATOM 26 OP1 C B2017 44.814 105.757 102.634 1.00 42.02 O
ATOM 27 OP2 C B2017 45.747 106.635 104.869 1.00 41.12 O
ATOM 28 O5' C B2017 46.245 107.816 102.706 1.00 42.36 O
TER
ATOM 2 OP1 A A 617 39.011 111.081 96.032 1.00 35.59 O
ATOM 3 OP2 A A 617 38.624 112.277 93.820 1.00 34.65 O
ATOM 4 O5' A A 617 38.945 113.584 95.958 1.00 35.27 O
ATOM 5 C5' A A 617 38.505 114.796 95.292 1.00 36.59 C
ATOM 6 C4' A A 617 39.075 116.024 95.987 1.00 38.36 C
ATOM 7 O4' A A 617 38.732 115.975 97.396 1.00 38.86 O
ATOM 8 C3' A A 617 40.593 116.166 95.980 1.00 38.77 C
ATOM 9 O3' A A 617 41.047 116.848 94.823 1.00 38.75 O
ATOM 10 C2' A A 617 40.854 117.027 97.203 1.00 39.08 C
ATOM 11 O2' A A 617 40.612 118.394 96.941 1.00 39.87 O
ATOM 12 C1' A A 617 39.800 116.501 98.172 1.00 39.42 C
ATOM 13 N9 A A 617 40.302 115.441 99.048 1.00 40.35 N
ATOM 14 C8 A A 617 39.920 114.118 99.066 1.00 41.20 C
ATOM 15 N7 A A 617 40.541 113.400 99.971 1.00 41.24 N
ATOM 16 C5 A A 617 41.387 114.308 100.591 1.00 41.07 C
ATOM 17 C6 A A 617 42.305 114.169 101.636 1.00 41.22 C
ATOM 18 N6 A A 617 42.527 113.014 102.271 1.00 41.81 N
ATOM 19 N1 A A 617 42.993 115.263 102.017 1.00 40.15 N
ATOM 20 C2 A A 617 42.760 116.414 101.385 1.00 40.66 C
ATOM 21 N3 A A 617 41.920 116.675 100.389 1.00 40.72 N
ATOM 22 C4 A A 617 41.255 115.566 100.032 1.00 40.27 C
ATOM 23 P A A 618 42.296 116.279 93.996 1.00 38.86 P
ATOM 24 OP1 A A 618 42.307 117.090 92.747 1.00 39.76 O
ATOM 25 OP2 A A 618 42.183 114.803 93.907 1.00 41.58 O
ATOM 26 O5' A A 618 43.582 116.577 94.904 1.00 39.98 O
TER
ATOM 1 O3' U B2015 42.271 108.169 109.484 1.00 36.66 O
ATOM 2 P G B2016 43.522 107.446 108.777 1.00 36.84 P
ATOM 3 OP1 G B2016 43.190 106.002 108.665 1.00 37.79 O
ATOM 4 OP2 G B2016 44.761 107.848 109.488 1.00 36.60 O
ATOM 5 O5' G B2016 43.543 108.080 107.314 1.00 37.31 O
ATOM 6 C5' G B2016 42.417 107.941 106.434 1.00 36.90 C
ATOM 7 C4' G B2016 42.532 108.904 105.283 1.00 37.75 C
ATOM 8 O4' G B2016 42.423 110.264 105.766 1.00 38.01 O
ATOM 9 C3' G B2016 43.862 108.877 104.563 1.00 38.25 C
ATOM 10 O3' G B2016 43.893 107.816 103.626 1.00 40.13 O
ATOM 11 C2' G B2016 43.902 110.250 103.908 1.00 38.13 C
ATOM 12 O2' G B2016 43.116 110.358 102.748 1.00 37.32 O
ATOM 13 C1' G B2016 43.260 111.112 104.992 1.00 38.62 C
ATOM 14 N9 G B2016 44.261 111.705 105.871 1.00 38.96 N
ATOM 15 C8 G B2016 44.832 111.133 106.980 1.00 39.07 C
ATOM 16 N7 G B2016 45.713 111.904 107.555 1.00 38.97 N
ATOM 17 C5 G B2016 45.723 113.052 106.780 1.00 37.83 C
ATOM 18 C6 G B2016 46.483 114.230 106.910 1.00 38.08 C
ATOM 19 O6 G B2016 47.338 114.502 107.761 1.00 37.68 O
ATOM 20 N1 G B2016 46.176 115.150 105.912 1.00 37.70 N
ATOM 21 C2 G B2016 45.261 114.950 104.917 1.00 37.62 C
ATOM 22 N2 G B2016 45.097 115.955 104.055 1.00 37.63 N
ATOM 23 N3 G B2016 44.554 113.846 104.777 1.00 38.21 N
ATOM 24 C4 G B2016 44.831 112.947 105.739 1.00 37.84 C
ATOM 25 P C B2017 45.207 106.897 103.498 1.00 42.05 P
ATOM 26 OP1 C B2017 44.814 105.757 102.634 1.00 42.02 O
ATOM 27 OP2 C B2017 45.747 106.635 104.869 1.00 41.12 O
ATOM 28 O5' C B2017 46.245 107.816 102.706 1.00 42.36 O
TER
Atoms:
OP1: (39.011,111.081,96.032)
OP2: (38.624,112.277,93.820)
C3': (40.593,116.166,95.980)
C1': (39.800,116.501,98.172)
C5': (38.505,114.796,95.292)
O4': (38.732,115.975,97.396)
C8: (39.920,114.118,99.066)
O2': (40.612,118.394,96.941)
C6: (42.305,114.169,101.636)
C5: (41.387,114.308,100.591)
C4: (41.255,115.566,100.032)
P: (39.261,112.238,95.152)
C4': (39.075,116.024,95.987)
C2': (40.854,117.027,97.203)
C2: (42.760,116.414,101.385)
N1: (42.993,115.263,102.017)
N3: (41.920,116.675,100.389)
N6: (42.527,113.014,102.271)
N7: (40.541,113.400,99.971)
N9: (40.302,115.441,99.048)
O5': (38.945,113.584,95.958)
O3': (41.047,116.848,94.823)
OP2: (38.624,112.277,93.820)
C3': (40.593,116.166,95.980)
C1': (39.800,116.501,98.172)
C5': (38.505,114.796,95.292)
O4': (38.732,115.975,97.396)
C8: (39.920,114.118,99.066)
O2': (40.612,118.394,96.941)
C6: (42.305,114.169,101.636)
C5: (41.387,114.308,100.591)
C4: (41.255,115.566,100.032)
P: (39.261,112.238,95.152)
C4': (39.075,116.024,95.987)
C2': (40.854,117.027,97.203)
C2: (42.760,116.414,101.385)
N1: (42.993,115.263,102.017)
N3: (41.920,116.675,100.389)
N6: (42.527,113.014,102.271)
N7: (40.541,113.400,99.971)
N9: (40.302,115.441,99.048)
O5': (38.945,113.584,95.958)
O3': (41.047,116.848,94.823)
OP1: (43.190,106.002,108.665)
OP2: (44.761,107.848,109.488)
C3': (43.862,108.877,104.563)
C1': (43.260,111.112,104.992)
C5': (42.417,107.941,106.434)
O6: (47.338,114.502,107.761)
O4': (42.423,110.264,105.766)
C8: (44.832,111.133,106.980)
C2: (45.261,114.950,104.917)
C6: (46.483,114.230,106.910)
C5: (45.723,113.052,106.780)
C4: (44.831,112.947,105.739)
P: (43.522,107.446,108.777)
C4': (42.532,108.904,105.283)
C2': (43.902,110.250,103.908)
O2': (43.116,110.358,102.748)
N1: (46.176,115.150,105.912)
N2: (45.097,115.955,104.055)
N3: (44.554,113.846,104.777)
N7: (45.713,111.904,107.555)
N9: (44.261,111.705,105.871)
O5': (43.543,108.080,107.314)
O3': (43.893,107.816,103.626)
OP2: (44.761,107.848,109.488)
C3': (43.862,108.877,104.563)
C1': (43.260,111.112,104.992)
C5': (42.417,107.941,106.434)
O6: (47.338,114.502,107.761)
O4': (42.423,110.264,105.766)
C8: (44.832,111.133,106.980)
C2: (45.261,114.950,104.917)
C6: (46.483,114.230,106.910)
C5: (45.723,113.052,106.780)
C4: (44.831,112.947,105.739)
P: (43.522,107.446,108.777)
C4': (42.532,108.904,105.283)
C2': (43.902,110.250,103.908)
O2': (43.116,110.358,102.748)
N1: (46.176,115.150,105.912)
N2: (45.097,115.955,104.055)
N3: (44.554,113.846,104.777)
N7: (45.713,111.904,107.555)
N9: (44.261,111.705,105.871)
O5': (43.543,108.080,107.314)
O3': (43.893,107.816,103.626)
Image (generated by PyMOL):