Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0325:0302
Extra
PDB:
ATOM 1 O3' G A 324 16.551 145.708 47.036 1.00 56.96 O
ATOM 2 P A A 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 3 OP1 A A 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 4 OP2 A A 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 5 O5' A A 325 16.229 143.283 47.637 1.00 58.24 O
ATOM 6 C5' A A 325 16.016 142.332 46.578 1.00 56.72 C
ATOM 7 C4' A A 325 15.654 141.002 47.172 1.00 55.68 C
ATOM 8 O4' A A 325 14.629 141.208 48.181 1.00 54.40 O
ATOM 9 C3' A A 325 15.113 139.945 46.221 1.00 57.45 C
ATOM 10 O3' A A 325 15.516 138.679 46.725 1.00 60.68 O
ATOM 11 C2' A A 325 13.603 140.086 46.412 1.00 57.66 C
ATOM 12 O2' A A 325 12.877 138.908 46.125 1.00 60.07 O
ATOM 13 C1' A A 325 13.529 140.373 47.906 1.00 55.06 C
ATOM 14 N9 A A 325 12.318 141.048 48.359 1.00 54.17 N
ATOM 15 C8 A A 325 11.504 140.660 49.390 1.00 54.12 C
ATOM 16 N7 A A 325 10.503 141.475 49.610 1.00 54.12 N
ATOM 17 C5 A A 325 10.659 142.463 48.652 1.00 54.24 C
ATOM 18 C6 A A 325 9.919 143.620 48.361 1.00 53.37 C
ATOM 19 N6 A A 325 8.835 144.000 49.037 1.00 52.28 N
ATOM 20 N1 A A 325 10.339 144.388 47.337 1.00 55.52 N
ATOM 21 C2 A A 325 11.438 144.013 46.660 1.00 56.29 C
ATOM 22 N3 A A 325 12.221 142.951 46.842 1.00 55.18 N
ATOM 23 C4 A A 325 11.771 142.208 47.866 1.00 55.01 C
ATOM 24 P C A 326 16.689 137.856 46.005 1.00 61.69 P
ATOM 25 OP1 C A 326 17.433 137.152 47.082 1.00 63.77 O
ATOM 26 OP2 C A 326 17.426 138.743 45.071 1.00 63.63 O
ATOM 27 O5' C A 326 15.914 136.754 45.157 1.00 64.01 O
TER
ATOM 1 O3' U B 301 1.245 145.307 53.076 1.00 69.55 O
ATOM 2 P G B 302 1.654 146.849 53.241 1.00 68.76 P
ATOM 3 OP1 G B 302 1.609 147.167 54.681 1.00 69.18 O
ATOM 4 OP2 G B 302 0.848 147.649 52.285 1.00 69.85 O
ATOM 5 O5' G B 302 3.175 146.902 52.777 1.00 68.39 O
ATOM 6 C5' G B 302 4.187 146.214 53.519 1.00 66.64 C
ATOM 7 C4' G B 302 5.491 146.212 52.759 1.00 66.14 C
ATOM 8 O4' G B 302 5.352 145.457 51.526 1.00 66.48 O
ATOM 9 C3' G B 302 5.999 147.562 52.289 1.00 65.77 C
ATOM 10 O3' G B 302 6.625 148.292 53.336 1.00 65.98 O
ATOM 11 C2' G B 302 6.982 147.145 51.206 1.00 66.12 C
ATOM 12 O2' G B 302 8.186 146.634 51.730 1.00 67.65 O
ATOM 13 C1' G B 302 6.214 146.004 50.540 1.00 66.14 C
ATOM 14 N9 G B 302 5.406 146.522 49.441 1.00 67.28 N
ATOM 15 C8 G B 302 4.145 147.062 49.516 1.00 67.12 C
ATOM 16 N7 G B 302 3.710 147.505 48.369 1.00 68.46 N
ATOM 17 C5 G B 302 4.739 147.226 47.479 1.00 68.98 C
ATOM 18 C6 G B 302 4.848 147.481 46.081 1.00 70.01 C
ATOM 19 O6 G B 302 4.025 148.020 45.324 1.00 71.50 O
ATOM 20 N1 G B 302 6.067 147.038 45.575 1.00 69.55 N
ATOM 21 C2 G B 302 7.053 146.427 46.309 1.00 68.54 C
ATOM 22 N2 G B 302 8.158 146.073 45.639 1.00 67.19 N
ATOM 23 N3 G B 302 6.963 146.182 47.604 1.00 69.15 N
ATOM 24 C4 G B 302 5.787 146.607 48.122 1.00 68.46 C
ATOM 25 P G B 303 6.499 149.896 53.383 1.00 65.23 P
ATOM 26 OP1 G B 303 7.407 150.371 54.454 1.00 66.18 O
ATOM 27 OP2 G B 303 5.061 150.255 53.438 1.00 66.28 O
ATOM 28 O5' G B 303 7.090 150.366 51.982 1.00 64.20 O
TER
ATOM 2 P A A 325 17.353 144.404 47.535 1.00 55.77 P
ATOM 3 OP1 A A 325 17.784 144.720 48.917 1.00 57.58 O
ATOM 4 OP2 A A 325 18.367 143.963 46.530 1.00 54.19 O
ATOM 5 O5' A A 325 16.229 143.283 47.637 1.00 58.24 O
ATOM 6 C5' A A 325 16.016 142.332 46.578 1.00 56.72 C
ATOM 7 C4' A A 325 15.654 141.002 47.172 1.00 55.68 C
ATOM 8 O4' A A 325 14.629 141.208 48.181 1.00 54.40 O
ATOM 9 C3' A A 325 15.113 139.945 46.221 1.00 57.45 C
ATOM 10 O3' A A 325 15.516 138.679 46.725 1.00 60.68 O
ATOM 11 C2' A A 325 13.603 140.086 46.412 1.00 57.66 C
ATOM 12 O2' A A 325 12.877 138.908 46.125 1.00 60.07 O
ATOM 13 C1' A A 325 13.529 140.373 47.906 1.00 55.06 C
ATOM 14 N9 A A 325 12.318 141.048 48.359 1.00 54.17 N
ATOM 15 C8 A A 325 11.504 140.660 49.390 1.00 54.12 C
ATOM 16 N7 A A 325 10.503 141.475 49.610 1.00 54.12 N
ATOM 17 C5 A A 325 10.659 142.463 48.652 1.00 54.24 C
ATOM 18 C6 A A 325 9.919 143.620 48.361 1.00 53.37 C
ATOM 19 N6 A A 325 8.835 144.000 49.037 1.00 52.28 N
ATOM 20 N1 A A 325 10.339 144.388 47.337 1.00 55.52 N
ATOM 21 C2 A A 325 11.438 144.013 46.660 1.00 56.29 C
ATOM 22 N3 A A 325 12.221 142.951 46.842 1.00 55.18 N
ATOM 23 C4 A A 325 11.771 142.208 47.866 1.00 55.01 C
ATOM 24 P C A 326 16.689 137.856 46.005 1.00 61.69 P
ATOM 25 OP1 C A 326 17.433 137.152 47.082 1.00 63.77 O
ATOM 26 OP2 C A 326 17.426 138.743 45.071 1.00 63.63 O
ATOM 27 O5' C A 326 15.914 136.754 45.157 1.00 64.01 O
TER
ATOM 1 O3' U B 301 1.245 145.307 53.076 1.00 69.55 O
ATOM 2 P G B 302 1.654 146.849 53.241 1.00 68.76 P
ATOM 3 OP1 G B 302 1.609 147.167 54.681 1.00 69.18 O
ATOM 4 OP2 G B 302 0.848 147.649 52.285 1.00 69.85 O
ATOM 5 O5' G B 302 3.175 146.902 52.777 1.00 68.39 O
ATOM 6 C5' G B 302 4.187 146.214 53.519 1.00 66.64 C
ATOM 7 C4' G B 302 5.491 146.212 52.759 1.00 66.14 C
ATOM 8 O4' G B 302 5.352 145.457 51.526 1.00 66.48 O
ATOM 9 C3' G B 302 5.999 147.562 52.289 1.00 65.77 C
ATOM 10 O3' G B 302 6.625 148.292 53.336 1.00 65.98 O
ATOM 11 C2' G B 302 6.982 147.145 51.206 1.00 66.12 C
ATOM 12 O2' G B 302 8.186 146.634 51.730 1.00 67.65 O
ATOM 13 C1' G B 302 6.214 146.004 50.540 1.00 66.14 C
ATOM 14 N9 G B 302 5.406 146.522 49.441 1.00 67.28 N
ATOM 15 C8 G B 302 4.145 147.062 49.516 1.00 67.12 C
ATOM 16 N7 G B 302 3.710 147.505 48.369 1.00 68.46 N
ATOM 17 C5 G B 302 4.739 147.226 47.479 1.00 68.98 C
ATOM 18 C6 G B 302 4.848 147.481 46.081 1.00 70.01 C
ATOM 19 O6 G B 302 4.025 148.020 45.324 1.00 71.50 O
ATOM 20 N1 G B 302 6.067 147.038 45.575 1.00 69.55 N
ATOM 21 C2 G B 302 7.053 146.427 46.309 1.00 68.54 C
ATOM 22 N2 G B 302 8.158 146.073 45.639 1.00 67.19 N
ATOM 23 N3 G B 302 6.963 146.182 47.604 1.00 69.15 N
ATOM 24 C4 G B 302 5.787 146.607 48.122 1.00 68.46 C
ATOM 25 P G B 303 6.499 149.896 53.383 1.00 65.23 P
ATOM 26 OP1 G B 303 7.407 150.371 54.454 1.00 66.18 O
ATOM 27 OP2 G B 303 5.061 150.255 53.438 1.00 66.28 O
ATOM 28 O5' G B 303 7.090 150.366 51.982 1.00 64.20 O
TER
Atoms:
OP1: (17.784,144.720,48.917)
OP2: (18.367,143.963,46.530)
C3': (15.113,139.945,46.221)
C1': (13.529,140.373,47.906)
C5': (16.016,142.332,46.578)
O4': (14.629,141.208,48.181)
C8: (11.504,140.660,49.390)
O2': (12.877,138.908,46.125)
C6: (9.919,143.620,48.361)
C5: (10.659,142.463,48.652)
C4: (11.771,142.208,47.866)
P: (17.353,144.404,47.535)
C4': (15.654,141.002,47.172)
C2': (13.603,140.086,46.412)
C2: (11.438,144.013,46.660)
N1: (10.339,144.388,47.337)
N3: (12.221,142.951,46.842)
N6: (8.835,144.000,49.037)
N7: (10.503,141.475,49.610)
N9: (12.318,141.048,48.359)
O5': (16.229,143.283,47.637)
O3': (15.516,138.679,46.725)
OP2: (18.367,143.963,46.530)
C3': (15.113,139.945,46.221)
C1': (13.529,140.373,47.906)
C5': (16.016,142.332,46.578)
O4': (14.629,141.208,48.181)
C8: (11.504,140.660,49.390)
O2': (12.877,138.908,46.125)
C6: (9.919,143.620,48.361)
C5: (10.659,142.463,48.652)
C4: (11.771,142.208,47.866)
P: (17.353,144.404,47.535)
C4': (15.654,141.002,47.172)
C2': (13.603,140.086,46.412)
C2: (11.438,144.013,46.660)
N1: (10.339,144.388,47.337)
N3: (12.221,142.951,46.842)
N6: (8.835,144.000,49.037)
N7: (10.503,141.475,49.610)
N9: (12.318,141.048,48.359)
O5': (16.229,143.283,47.637)
O3': (15.516,138.679,46.725)
OP1: (1.609,147.167,54.681)
OP2: (0.848,147.649,52.285)
C3': (5.999,147.562,52.289)
C1': (6.214,146.004,50.540)
C5': (4.187,146.214,53.519)
O6: (4.025,148.020,45.324)
O4': (5.352,145.457,51.526)
C8: (4.145,147.062,49.516)
C2: (7.053,146.427,46.309)
C6: (4.848,147.481,46.081)
C5: (4.739,147.226,47.479)
C4: (5.787,146.607,48.122)
P: (1.654,146.849,53.241)
C4': (5.491,146.212,52.759)
C2': (6.982,147.145,51.206)
O2': (8.186,146.634,51.730)
N1: (6.067,147.038,45.575)
N2: (8.158,146.073,45.639)
N3: (6.963,146.182,47.604)
N7: (3.710,147.505,48.369)
N9: (5.406,146.522,49.441)
O5': (3.175,146.902,52.777)
O3': (6.625,148.292,53.336)
OP2: (0.848,147.649,52.285)
C3': (5.999,147.562,52.289)
C1': (6.214,146.004,50.540)
C5': (4.187,146.214,53.519)
O6: (4.025,148.020,45.324)
O4': (5.352,145.457,51.526)
C8: (4.145,147.062,49.516)
C2: (7.053,146.427,46.309)
C6: (4.848,147.481,46.081)
C5: (4.739,147.226,47.479)
C4: (5.787,146.607,48.122)
P: (1.654,146.849,53.241)
C4': (5.491,146.212,52.759)
C2': (6.982,147.145,51.206)
O2': (8.186,146.634,51.730)
N1: (6.067,147.038,45.575)
N2: (8.158,146.073,45.639)
N3: (6.963,146.182,47.604)
N7: (3.710,147.505,48.369)
N9: (5.406,146.522,49.441)
O5': (3.175,146.902,52.777)
O3': (6.625,148.292,53.336)
Image (generated by PyMOL):