Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B52:B24
Extra
PDB:
ATOM 1 O3' A A 51 -22.292 -17.827 -0.669 1.00 55.46 O
ATOM 2 P A A 52 -23.087 -16.453 -0.417 1.00 56.72 P
ATOM 3 OP1 A A 52 -24.025 -16.331 -1.561 1.00 56.74 O
ATOM 4 OP2 A A 52 -22.162 -15.327 -0.140 1.00 53.68 O
ATOM 5 O5' A A 52 -23.881 -16.882 0.896 1.00 57.77 O
ATOM 6 C5' A A 52 -23.653 -16.354 2.206 1.00 55.41 C
ATOM 7 C4' A A 52 -23.316 -17.465 3.172 1.00 53.60 C
ATOM 8 O4' A A 52 -21.937 -17.884 2.991 1.00 53.27 O
ATOM 9 C3' A A 52 -23.406 -17.118 4.649 1.00 52.02 C
ATOM 10 O3' A A 52 -24.738 -17.210 5.113 1.00 52.20 O
ATOM 11 C2' A A 52 -22.481 -18.147 5.291 1.00 52.67 C
ATOM 12 O2' A A 52 -23.147 -19.400 5.400 1.00 53.28 O
ATOM 13 C1' A A 52 -21.384 -18.274 4.235 1.00 52.30 C
ATOM 14 N9 A A 52 -20.176 -17.470 4.538 1.00 51.31 N
ATOM 15 C8 A A 52 -19.702 -16.355 3.889 1.00 51.59 C
ATOM 16 N7 A A 52 -18.590 -15.879 4.401 1.00 50.68 N
ATOM 17 C5 A A 52 -18.309 -16.740 5.454 1.00 49.68 C
ATOM 18 C6 A A 52 -17.264 -16.781 6.395 1.00 48.01 C
ATOM 19 N6 A A 52 -16.263 -15.899 6.430 1.00 47.69 N
ATOM 20 N1 A A 52 -17.281 -17.771 7.312 1.00 46.62 N
ATOM 21 C2 A A 52 -18.285 -18.655 7.278 1.00 47.43 C
ATOM 22 N3 A A 52 -19.322 -18.723 6.447 1.00 48.63 N
ATOM 23 C4 A A 52 -19.275 -17.726 5.546 1.00 49.89 C
ATOM 24 P A A 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 25 OP1 A A 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 26 OP2 A A 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 27 O5' A A 53 -25.908 -16.617 7.244 1.00 51.81 O
TER
ATOM 1 O3' G B 23 -8.521 -11.938 7.352 1.00 48.13 O
ATOM 2 P G B 24 -9.091 -10.752 8.275 1.00 49.87 P
ATOM 3 OP1 G B 24 -8.810 -9.482 7.559 1.00 50.24 O
ATOM 4 OP2 G B 24 -8.538 -10.954 9.637 1.00 49.45 O
ATOM 5 O5' G B 24 -10.649 -11.059 8.250 1.00 47.90 O
ATOM 6 C5' G B 24 -11.359 -10.938 7.023 1.00 48.89 C
ATOM 7 C4' G B 24 -12.664 -11.682 7.093 1.00 49.07 C
ATOM 8 O4' G B 24 -12.409 -13.079 7.379 1.00 48.29 O
ATOM 9 C3' G B 24 -13.628 -11.242 8.181 1.00 48.06 C
ATOM 10 O3' G B 24 -14.377 -10.104 7.802 1.00 48.59 O
ATOM 11 C2' G B 24 -14.478 -12.492 8.380 1.00 46.57 C
ATOM 12 O2' G B 24 -15.424 -12.589 7.326 1.00 46.91 O
ATOM 13 C1' G B 24 -13.440 -13.600 8.188 1.00 46.34 C
ATOM 14 N9 G B 24 -12.852 -14.064 9.463 1.00 44.07 N
ATOM 15 C8 G B 24 -11.808 -13.500 10.155 1.00 43.79 C
ATOM 16 N7 G B 24 -11.515 -14.143 11.252 1.00 42.49 N
ATOM 17 C5 G B 24 -12.418 -15.197 11.285 1.00 41.65 C
ATOM 18 C6 G B 24 -12.588 -16.237 12.236 1.00 40.14 C
ATOM 19 O6 G B 24 -11.951 -16.440 13.277 1.00 39.54 O
ATOM 20 N1 G B 24 -13.624 -17.093 11.876 1.00 38.47 N
ATOM 21 C2 G B 24 -14.398 -16.969 10.749 1.00 39.77 C
ATOM 22 N2 G B 24 -15.352 -17.896 10.574 1.00 39.12 N
ATOM 23 N3 G B 24 -14.249 -16.006 9.856 1.00 41.48 N
ATOM 24 C4 G B 24 -13.248 -15.164 10.185 1.00 42.12 C
ATOM 25 P U B 25 -14.608 -8.893 8.832 1.00 49.80 P
ATOM 26 OP1 U B 25 -14.028 -9.313 10.132 1.00 49.62 O
ATOM 27 OP2 U B 25 -16.052 -8.559 8.749 1.00 48.52 O
ATOM 28 O5' U B 25 -13.732 -7.725 8.196 1.00 52.24 O
TER
ATOM 2 P A A 52 -23.087 -16.453 -0.417 1.00 56.72 P
ATOM 3 OP1 A A 52 -24.025 -16.331 -1.561 1.00 56.74 O
ATOM 4 OP2 A A 52 -22.162 -15.327 -0.140 1.00 53.68 O
ATOM 5 O5' A A 52 -23.881 -16.882 0.896 1.00 57.77 O
ATOM 6 C5' A A 52 -23.653 -16.354 2.206 1.00 55.41 C
ATOM 7 C4' A A 52 -23.316 -17.465 3.172 1.00 53.60 C
ATOM 8 O4' A A 52 -21.937 -17.884 2.991 1.00 53.27 O
ATOM 9 C3' A A 52 -23.406 -17.118 4.649 1.00 52.02 C
ATOM 10 O3' A A 52 -24.738 -17.210 5.113 1.00 52.20 O
ATOM 11 C2' A A 52 -22.481 -18.147 5.291 1.00 52.67 C
ATOM 12 O2' A A 52 -23.147 -19.400 5.400 1.00 53.28 O
ATOM 13 C1' A A 52 -21.384 -18.274 4.235 1.00 52.30 C
ATOM 14 N9 A A 52 -20.176 -17.470 4.538 1.00 51.31 N
ATOM 15 C8 A A 52 -19.702 -16.355 3.889 1.00 51.59 C
ATOM 16 N7 A A 52 -18.590 -15.879 4.401 1.00 50.68 N
ATOM 17 C5 A A 52 -18.309 -16.740 5.454 1.00 49.68 C
ATOM 18 C6 A A 52 -17.264 -16.781 6.395 1.00 48.01 C
ATOM 19 N6 A A 52 -16.263 -15.899 6.430 1.00 47.69 N
ATOM 20 N1 A A 52 -17.281 -17.771 7.312 1.00 46.62 N
ATOM 21 C2 A A 52 -18.285 -18.655 7.278 1.00 47.43 C
ATOM 22 N3 A A 52 -19.322 -18.723 6.447 1.00 48.63 N
ATOM 23 C4 A A 52 -19.275 -17.726 5.546 1.00 49.89 C
ATOM 24 P A A 53 -25.440 -15.977 5.861 1.00 54.17 P
ATOM 25 OP1 A A 53 -26.621 -15.603 5.043 1.00 52.97 O
ATOM 26 OP2 A A 53 -24.368 -14.975 6.087 1.00 51.92 O
ATOM 27 O5' A A 53 -25.908 -16.617 7.244 1.00 51.81 O
TER
ATOM 1 O3' G B 23 -8.521 -11.938 7.352 1.00 48.13 O
ATOM 2 P G B 24 -9.091 -10.752 8.275 1.00 49.87 P
ATOM 3 OP1 G B 24 -8.810 -9.482 7.559 1.00 50.24 O
ATOM 4 OP2 G B 24 -8.538 -10.954 9.637 1.00 49.45 O
ATOM 5 O5' G B 24 -10.649 -11.059 8.250 1.00 47.90 O
ATOM 6 C5' G B 24 -11.359 -10.938 7.023 1.00 48.89 C
ATOM 7 C4' G B 24 -12.664 -11.682 7.093 1.00 49.07 C
ATOM 8 O4' G B 24 -12.409 -13.079 7.379 1.00 48.29 O
ATOM 9 C3' G B 24 -13.628 -11.242 8.181 1.00 48.06 C
ATOM 10 O3' G B 24 -14.377 -10.104 7.802 1.00 48.59 O
ATOM 11 C2' G B 24 -14.478 -12.492 8.380 1.00 46.57 C
ATOM 12 O2' G B 24 -15.424 -12.589 7.326 1.00 46.91 O
ATOM 13 C1' G B 24 -13.440 -13.600 8.188 1.00 46.34 C
ATOM 14 N9 G B 24 -12.852 -14.064 9.463 1.00 44.07 N
ATOM 15 C8 G B 24 -11.808 -13.500 10.155 1.00 43.79 C
ATOM 16 N7 G B 24 -11.515 -14.143 11.252 1.00 42.49 N
ATOM 17 C5 G B 24 -12.418 -15.197 11.285 1.00 41.65 C
ATOM 18 C6 G B 24 -12.588 -16.237 12.236 1.00 40.14 C
ATOM 19 O6 G B 24 -11.951 -16.440 13.277 1.00 39.54 O
ATOM 20 N1 G B 24 -13.624 -17.093 11.876 1.00 38.47 N
ATOM 21 C2 G B 24 -14.398 -16.969 10.749 1.00 39.77 C
ATOM 22 N2 G B 24 -15.352 -17.896 10.574 1.00 39.12 N
ATOM 23 N3 G B 24 -14.249 -16.006 9.856 1.00 41.48 N
ATOM 24 C4 G B 24 -13.248 -15.164 10.185 1.00 42.12 C
ATOM 25 P U B 25 -14.608 -8.893 8.832 1.00 49.80 P
ATOM 26 OP1 U B 25 -14.028 -9.313 10.132 1.00 49.62 O
ATOM 27 OP2 U B 25 -16.052 -8.559 8.749 1.00 48.52 O
ATOM 28 O5' U B 25 -13.732 -7.725 8.196 1.00 52.24 O
TER
Atoms:
OP1: (-24.025,-16.331,-1.561)
OP2: (-22.162,-15.327,-0.140)
C3': (-23.406,-17.118,4.649)
C1': (-21.384,-18.274,4.235)
C5': (-23.653,-16.354,2.206)
O4': (-21.937,-17.884,2.991)
C8: (-19.702,-16.355,3.889)
O2': (-23.147,-19.400,5.400)
C6: (-17.264,-16.781,6.395)
C5: (-18.309,-16.740,5.454)
C4: (-19.275,-17.726,5.546)
P: (-23.087,-16.453,-0.417)
C4': (-23.316,-17.465,3.172)
C2': (-22.481,-18.147,5.291)
C2: (-18.285,-18.655,7.278)
N1: (-17.281,-17.771,7.312)
N3: (-19.322,-18.723,6.447)
N6: (-16.263,-15.899,6.430)
N7: (-18.590,-15.879,4.401)
N9: (-20.176,-17.470,4.538)
O5': (-23.881,-16.882,0.896)
O3': (-24.738,-17.210,5.113)
OP2: (-22.162,-15.327,-0.140)
C3': (-23.406,-17.118,4.649)
C1': (-21.384,-18.274,4.235)
C5': (-23.653,-16.354,2.206)
O4': (-21.937,-17.884,2.991)
C8: (-19.702,-16.355,3.889)
O2': (-23.147,-19.400,5.400)
C6: (-17.264,-16.781,6.395)
C5: (-18.309,-16.740,5.454)
C4: (-19.275,-17.726,5.546)
P: (-23.087,-16.453,-0.417)
C4': (-23.316,-17.465,3.172)
C2': (-22.481,-18.147,5.291)
C2: (-18.285,-18.655,7.278)
N1: (-17.281,-17.771,7.312)
N3: (-19.322,-18.723,6.447)
N6: (-16.263,-15.899,6.430)
N7: (-18.590,-15.879,4.401)
N9: (-20.176,-17.470,4.538)
O5': (-23.881,-16.882,0.896)
O3': (-24.738,-17.210,5.113)
OP1: (-8.810,-9.482,7.559)
OP2: (-8.538,-10.954,9.637)
C3': (-13.628,-11.242,8.181)
C1': (-13.440,-13.600,8.188)
C5': (-11.359,-10.938,7.023)
O6: (-11.951,-16.440,13.277)
O4': (-12.409,-13.079,7.379)
C8: (-11.808,-13.500,10.155)
C2: (-14.398,-16.969,10.749)
C6: (-12.588,-16.237,12.236)
C5: (-12.418,-15.197,11.285)
C4: (-13.248,-15.164,10.185)
P: (-9.091,-10.752,8.275)
C4': (-12.664,-11.682,7.093)
C2': (-14.478,-12.492,8.380)
O2': (-15.424,-12.589,7.326)
N1: (-13.624,-17.093,11.876)
N2: (-15.352,-17.896,10.574)
N3: (-14.249,-16.006,9.856)
N7: (-11.515,-14.143,11.252)
N9: (-12.852,-14.064,9.463)
O5': (-10.649,-11.059,8.250)
O3': (-14.377,-10.104,7.802)
OP2: (-8.538,-10.954,9.637)
C3': (-13.628,-11.242,8.181)
C1': (-13.440,-13.600,8.188)
C5': (-11.359,-10.938,7.023)
O6: (-11.951,-16.440,13.277)
O4': (-12.409,-13.079,7.379)
C8: (-11.808,-13.500,10.155)
C2: (-14.398,-16.969,10.749)
C6: (-12.588,-16.237,12.236)
C5: (-12.418,-15.197,11.285)
C4: (-13.248,-15.164,10.185)
P: (-9.091,-10.752,8.275)
C4': (-12.664,-11.682,7.093)
C2': (-14.478,-12.492,8.380)
O2': (-15.424,-12.589,7.326)
N1: (-13.624,-17.093,11.876)
N2: (-15.352,-17.896,10.574)
N3: (-14.249,-16.006,9.856)
N7: (-11.515,-14.143,11.252)
N9: (-12.852,-14.064,9.463)
O5': (-10.649,-11.059,8.250)
O3': (-14.377,-10.104,7.802)
Image (generated by PyMOL):