ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:92:924

Extra

PDB:
ATOM 1 O3' U A 1 54.464 12.015 102.899 1.00117.21 O
ATOM 2 P A A 2 54.701 13.225 101.856 1.00111.49 P
ATOM 3 OP1 A A 2 53.397 13.846 101.539 1.00111.37 O
ATOM 4 OP2 A A 2 55.551 12.711 100.747 1.00112.00 O
ATOM 5 O5' A A 2 55.584 14.265 102.676 1.00103.71 O
ATOM 6 C5' A A 2 55.214 15.645 102.791 1.00 91.70 C
ATOM 7 C4' A A 2 56.410 16.458 103.212 1.00 84.23 C
ATOM 8 O4' A A 2 57.037 15.825 104.353 1.00 82.82 O
ATOM 9 C3' A A 2 57.518 16.580 102.182 1.00 80.00 C
ATOM 10 O3' A A 2 58.251 17.781 102.402 1.00 72.17 O
ATOM 11 C2' A A 2 58.349 15.326 102.433 1.00 80.84 C
ATOM 12 O2' A A 2 59.709 15.470 102.079 1.00 82.45 O
ATOM 13 C1' A A 2 58.183 15.105 103.940 1.00 82.19 C
ATOM 14 N9 A A 2 57.961 13.695 104.284 1.00 83.55 N
ATOM 15 C8 A A 2 57.673 12.647 103.435 1.00 83.36 C
ATOM 16 N7 A A 2 57.511 11.500 104.044 1.00 82.80 N
ATOM 17 C5 A A 2 57.712 11.803 105.381 1.00 84.03 C
ATOM 18 C6 A A 2 57.686 11.010 106.538 1.00 84.65 C
ATOM 19 N6 A A 2 57.440 9.700 106.528 1.00 85.61 N
ATOM 20 N1 A A 2 57.929 11.615 107.721 1.00 84.74 N
ATOM 21 C2 A A 2 58.184 12.929 107.727 1.00 85.03 C
ATOM 22 N3 A A 2 58.240 13.783 106.706 1.00 85.10 N
ATOM 23 C4 A A 2 57.992 13.150 105.546 1.00 84.22 C
ATOM 24 P G A 3 57.938 19.082 101.508 1.00 64.42 P
ATOM 25 OP1 G A 3 59.029 20.049 101.738 1.00 65.27 O
ATOM 26 OP2 G A 3 56.539 19.485 101.782 1.00 65.55 O
ATOM 27 O5' G A 3 58.008 18.570 99.998 1.00 59.68 O
TER

ATOM 1 O3' U B 23 61.581 1.767 100.027 1.00121.08 O
ATOM 2 P G B 24 61.892 3.178 99.325 1.00115.47 P
ATOM 3 OP1 G B 24 62.694 2.903 98.101 1.00115.53 O
ATOM 4 OP2 G B 24 62.425 4.104 100.358 1.00115.62 O
ATOM 5 O5' G B 24 60.455 3.708 98.890 1.00110.40 O
ATOM 6 C5' G B 24 59.899 3.397 97.597 1.00102.63 C
ATOM 7 C4' G B 24 58.852 4.421 97.235 1.00 96.52 C
ATOM 8 O4' G B 24 57.785 4.356 98.219 1.00 95.87 O
ATOM 9 C3' G B 24 59.339 5.860 97.301 1.00 92.49 C
ATOM 10 O3' G B 24 59.999 6.267 96.109 1.00 86.33 O
ATOM 11 C2' G B 24 58.058 6.624 97.599 1.00 92.61 C
ATOM 12 O2' G B 24 57.229 6.792 96.466 1.00 91.58 O
ATOM 13 C1' G B 24 57.385 5.667 98.584 1.00 93.53 C
ATOM 14 N9 G B 24 57.793 5.896 99.970 1.00 93.25 N
ATOM 15 C8 G B 24 58.517 5.052 100.785 1.00 92.60 C
ATOM 16 N7 G B 24 58.713 5.536 101.981 1.00 92.10 N
ATOM 17 C5 G B 24 58.081 6.772 101.957 1.00 92.86 C
ATOM 18 C6 G B 24 57.945 7.759 102.970 1.00 92.81 C
ATOM 19 O6 G B 24 58.347 7.729 104.135 1.00 92.63 O
ATOM 20 N1 G B 24 57.245 8.869 102.510 1.00 93.37 N
ATOM 21 C2 G B 24 56.731 9.011 101.245 1.00 93.82 C
ATOM 22 N2 G B 24 56.096 10.160 100.987 1.00 94.04 N
ATOM 23 N3 G B 24 56.835 8.096 100.299 1.00 93.75 N
ATOM 24 C4 G B 24 57.518 7.011 100.720 1.00 93.27 C
ATOM 25 P C B 25 61.278 7.236 96.201 1.00 80.65 P
ATOM 26 OP1 C B 25 61.776 7.423 94.820 1.00 80.72 O
ATOM 27 OP2 C B 25 62.203 6.742 97.252 1.00 81.18 O
ATOM 28 O5' C B 25 60.664 8.614 96.703 1.00 78.47 O
TER

Atoms:
OP1: (53.397,13.846,101.539)
OP2: (55.551,12.711,100.747)
C3': (57.518,16.580,102.182)
C1': (58.183,15.105,103.940)
C5': (55.214,15.645,102.791)
O4': (57.037,15.825,104.353)
C8: (57.673,12.647,103.435)
O2': (59.709,15.470,102.079)
C6: (57.686,11.010,106.538)
C5: (57.712,11.803,105.381)
C4: (57.992,13.150,105.546)
P: (54.701,13.225,101.856)
C4': (56.410,16.458,103.212)
C2': (58.349,15.326,102.433)
C2: (58.184,12.929,107.727)
N1: (57.929,11.615,107.721)
N3: (58.240,13.783,106.706)
N6: (57.440,9.700,106.528)
N7: (57.511,11.500,104.044)
N9: (57.961,13.695,104.284)
O5': (55.584,14.265,102.676)
O3': (58.251,17.781,102.402)
OP1: (62.694,2.903,98.101)
OP2: (62.425,4.104,100.358)
C3': (59.339,5.860,97.301)
C1': (57.385,5.667,98.584)
C5': (59.899,3.397,97.597)
O6: (58.347,7.729,104.135)
O4': (57.785,4.356,98.219)
C8: (58.517,5.052,100.785)
C2: (56.731,9.011,101.245)
C6: (57.945,7.759,102.970)
C5: (58.081,6.772,101.957)
C4: (57.518,7.011,100.720)
P: (61.892,3.178,99.325)
C4': (58.852,4.421,97.235)
C2': (58.058,6.624,97.599)
O2': (57.229,6.792,96.466)
N1: (57.245,8.869,102.510)
N2: (56.096,10.160,100.987)
N3: (56.835,8.096,100.299)
N7: (58.713,5.536,101.981)
N9: (57.793,5.896,99.970)
O5': (60.455,3.708,98.890)
O3': (59.999,6.267,96.109)
Image (generated by PyMOL):
PyMOL image
show in jmol