Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0969:0948
Extra
PDB:
ATOM 1 O3' U A 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 2 P C A 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 3 OP1 C A 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 4 OP2 C A 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 5 O5' C A 969 60.860 55.183 110.552 1.00 52.14 O
ATOM 6 C5' C A 969 61.131 53.790 110.769 1.00 52.73 C
ATOM 7 C4' C A 969 60.182 53.228 111.806 1.00 54.15 C
ATOM 8 O4' C A 969 60.441 53.808 113.118 1.00 53.35 O
ATOM 9 C3' C A 969 58.714 53.540 111.581 1.00 54.18 C
ATOM 10 O3' C A 969 58.110 52.742 110.581 1.00 55.27 O
ATOM 11 C2' C A 969 58.128 53.308 112.964 1.00 52.16 C
ATOM 12 O2' C A 969 57.984 51.943 113.278 1.00 50.58 O
ATOM 13 C1' C A 969 59.217 53.922 113.839 1.00 52.70 C
ATOM 14 N1 C A 969 58.924 55.348 114.066 1.00 54.51 N
ATOM 15 C2 C A 969 58.077 55.701 115.123 1.00 55.44 C
ATOM 16 O2 C A 969 57.628 54.807 115.862 1.00 57.04 O
ATOM 17 N3 C A 969 57.765 57.005 115.312 1.00 55.10 N
ATOM 18 C4 C A 969 58.266 57.936 114.502 1.00 53.64 C
ATOM 19 N4 C A 969 57.922 59.203 114.721 1.00 52.51 N
ATOM 20 C5 C A 969 59.141 57.609 113.430 1.00 54.44 C
ATOM 21 C6 C A 969 59.444 56.317 113.251 1.00 55.20 C
ATOM 22 P C A 970 56.825 53.305 109.806 1.00 55.36 P
ATOM 23 OP1 C A 970 55.940 52.143 109.539 1.00 56.59 O
ATOM 24 OP2 C A 970 57.295 54.155 108.673 1.00 54.40 O
ATOM 25 O5' C A 970 56.106 54.209 110.903 1.00 51.33 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
ATOM 2 P C A 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 3 OP1 C A 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 4 OP2 C A 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 5 O5' C A 969 60.860 55.183 110.552 1.00 52.14 O
ATOM 6 C5' C A 969 61.131 53.790 110.769 1.00 52.73 C
ATOM 7 C4' C A 969 60.182 53.228 111.806 1.00 54.15 C
ATOM 8 O4' C A 969 60.441 53.808 113.118 1.00 53.35 O
ATOM 9 C3' C A 969 58.714 53.540 111.581 1.00 54.18 C
ATOM 10 O3' C A 969 58.110 52.742 110.581 1.00 55.27 O
ATOM 11 C2' C A 969 58.128 53.308 112.964 1.00 52.16 C
ATOM 12 O2' C A 969 57.984 51.943 113.278 1.00 50.58 O
ATOM 13 C1' C A 969 59.217 53.922 113.839 1.00 52.70 C
ATOM 14 N1 C A 969 58.924 55.348 114.066 1.00 54.51 N
ATOM 15 C2 C A 969 58.077 55.701 115.123 1.00 55.44 C
ATOM 16 O2 C A 969 57.628 54.807 115.862 1.00 57.04 O
ATOM 17 N3 C A 969 57.765 57.005 115.312 1.00 55.10 N
ATOM 18 C4 C A 969 58.266 57.936 114.502 1.00 53.64 C
ATOM 19 N4 C A 969 57.922 59.203 114.721 1.00 52.51 N
ATOM 20 C5 C A 969 59.141 57.609 113.430 1.00 54.44 C
ATOM 21 C6 C A 969 59.444 56.317 113.251 1.00 55.20 C
ATOM 22 P C A 970 56.825 53.305 109.806 1.00 55.36 P
ATOM 23 OP1 C A 970 55.940 52.143 109.539 1.00 56.59 O
ATOM 24 OP2 C A 970 57.295 54.155 108.673 1.00 54.40 O
ATOM 25 O5' C A 970 56.106 54.209 110.903 1.00 51.33 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
Atoms:
C2: (58.077,55.701,115.123)
OP1: (63.057,55.560,109.371)
OP2: (60.815,56.064,108.234)
C4: (58.266,57.936,114.502)
O5': (60.860,55.183,110.552)
C3': (58.714,53.540,111.581)
C1': (59.217,53.922,113.839)
O4': (60.441,53.808,113.118)
C5': (61.131,53.790,110.769)
P: (61.652,56.032,109.460)
O2: (57.628,54.807,115.862)
C4': (60.182,53.228,111.806)
C2': (58.128,53.308,112.964)
O2': (57.984,51.943,113.278)
N1: (58.924,55.348,114.066)
N3: (57.765,57.005,115.312)
N4: (57.922,59.203,114.721)
C6: (59.444,56.317,113.251)
C5: (59.141,57.609,113.430)
O3': (58.110,52.742,110.581)
OP1: (63.057,55.560,109.371)
OP2: (60.815,56.064,108.234)
C4: (58.266,57.936,114.502)
O5': (60.860,55.183,110.552)
C3': (58.714,53.540,111.581)
C1': (59.217,53.922,113.839)
O4': (60.441,53.808,113.118)
C5': (61.131,53.790,110.769)
P: (61.652,56.032,109.460)
O2: (57.628,54.807,115.862)
C4': (60.182,53.228,111.806)
C2': (58.128,53.308,112.964)
O2': (57.984,51.943,113.278)
N1: (58.924,55.348,114.066)
N3: (57.765,57.005,115.312)
N4: (57.922,59.203,114.721)
C6: (59.444,56.317,113.251)
C5: (59.141,57.609,113.430)
O3': (58.110,52.742,110.581)
OP1: (62.205,53.397,120.450)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
Image (generated by PyMOL):