Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A51:A23
Extra
PDB:
ATOM 1 O3' A A 50 14.856 -5.845 -39.575 1.00 53.92 O
ATOM 2 P A A 51 15.726 -7.195 -39.558 1.00 52.00 P
ATOM 3 OP1 A A 51 17.016 -6.886 -40.218 1.00 52.56 O
ATOM 4 OP2 A A 51 14.877 -8.272 -40.119 1.00 51.39 O
ATOM 5 O5' A A 51 15.960 -7.446 -38.003 1.00 47.89 O
ATOM 6 C5' A A 51 14.882 -7.370 -37.080 1.00 44.91 C
ATOM 7 C4' A A 51 15.178 -6.395 -35.967 1.00 44.88 C
ATOM 8 O4' A A 51 14.477 -5.144 -36.206 1.00 45.69 O
ATOM 9 C3' A A 51 14.716 -6.801 -34.576 1.00 46.10 C
ATOM 10 O3' A A 51 15.573 -7.737 -33.949 1.00 48.48 O
ATOM 11 C2' A A 51 14.646 -5.461 -33.862 1.00 47.40 C
ATOM 12 O2' A A 51 15.949 -4.997 -33.534 1.00 47.07 O
ATOM 13 C1' A A 51 14.084 -4.575 -34.972 1.00 42.27 C
ATOM 14 N9 A A 51 12.612 -4.520 -34.928 1.00 38.79 N
ATOM 15 C8 A A 51 11.719 -5.240 -35.684 1.00 39.09 C
ATOM 16 N7 A A 51 10.463 -4.983 -35.411 1.00 41.06 N
ATOM 17 C5 A A 51 10.534 -4.032 -34.402 1.00 41.12 C
ATOM 18 C6 A A 51 9.538 -3.352 -33.680 1.00 37.68 C
ATOM 19 N6 A A 51 8.231 -3.534 -33.874 1.00 38.41 N
ATOM 20 N1 A A 51 9.931 -2.466 -32.741 1.00 33.92 N
ATOM 21 C2 A A 51 11.244 -2.287 -32.550 1.00 36.61 C
ATOM 22 N3 A A 51 12.277 -2.864 -33.162 1.00 41.70 N
ATOM 23 C4 A A 51 11.850 -3.738 -34.091 1.00 43.06 C
ATOM 24 P U A 52 14.983 -8.769 -32.866 1.00 43.33 P
ATOM 25 OP1 U A 52 16.099 -9.134 -31.959 1.00 55.38 O
ATOM 26 OP2 U A 52 14.292 -9.847 -33.618 1.00 45.60 O
ATOM 27 O5' U A 52 13.915 -7.888 -32.080 1.00 39.89 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
ATOM 2 P A A 51 15.726 -7.195 -39.558 1.00 52.00 P
ATOM 3 OP1 A A 51 17.016 -6.886 -40.218 1.00 52.56 O
ATOM 4 OP2 A A 51 14.877 -8.272 -40.119 1.00 51.39 O
ATOM 5 O5' A A 51 15.960 -7.446 -38.003 1.00 47.89 O
ATOM 6 C5' A A 51 14.882 -7.370 -37.080 1.00 44.91 C
ATOM 7 C4' A A 51 15.178 -6.395 -35.967 1.00 44.88 C
ATOM 8 O4' A A 51 14.477 -5.144 -36.206 1.00 45.69 O
ATOM 9 C3' A A 51 14.716 -6.801 -34.576 1.00 46.10 C
ATOM 10 O3' A A 51 15.573 -7.737 -33.949 1.00 48.48 O
ATOM 11 C2' A A 51 14.646 -5.461 -33.862 1.00 47.40 C
ATOM 12 O2' A A 51 15.949 -4.997 -33.534 1.00 47.07 O
ATOM 13 C1' A A 51 14.084 -4.575 -34.972 1.00 42.27 C
ATOM 14 N9 A A 51 12.612 -4.520 -34.928 1.00 38.79 N
ATOM 15 C8 A A 51 11.719 -5.240 -35.684 1.00 39.09 C
ATOM 16 N7 A A 51 10.463 -4.983 -35.411 1.00 41.06 N
ATOM 17 C5 A A 51 10.534 -4.032 -34.402 1.00 41.12 C
ATOM 18 C6 A A 51 9.538 -3.352 -33.680 1.00 37.68 C
ATOM 19 N6 A A 51 8.231 -3.534 -33.874 1.00 38.41 N
ATOM 20 N1 A A 51 9.931 -2.466 -32.741 1.00 33.92 N
ATOM 21 C2 A A 51 11.244 -2.287 -32.550 1.00 36.61 C
ATOM 22 N3 A A 51 12.277 -2.864 -33.162 1.00 41.70 N
ATOM 23 C4 A A 51 11.850 -3.738 -34.091 1.00 43.06 C
ATOM 24 P U A 52 14.983 -8.769 -32.866 1.00 43.33 P
ATOM 25 OP1 U A 52 16.099 -9.134 -31.959 1.00 55.38 O
ATOM 26 OP2 U A 52 14.292 -9.847 -33.618 1.00 45.60 O
ATOM 27 O5' U A 52 13.915 -7.888 -32.080 1.00 39.89 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
Atoms:
OP1: (17.016,-6.886,-40.218)
OP2: (14.877,-8.272,-40.119)
C3': (14.716,-6.801,-34.576)
C1': (14.084,-4.575,-34.972)
C5': (14.882,-7.370,-37.080)
O4': (14.477,-5.144,-36.206)
C8: (11.719,-5.240,-35.684)
O2': (15.949,-4.997,-33.534)
C6: (9.538,-3.352,-33.680)
C5: (10.534,-4.032,-34.402)
C4: (11.850,-3.738,-34.091)
P: (15.726,-7.195,-39.558)
C4': (15.178,-6.395,-35.967)
C2': (14.646,-5.461,-33.862)
C2: (11.244,-2.287,-32.550)
N1: (9.931,-2.466,-32.741)
N3: (12.277,-2.864,-33.162)
N6: (8.231,-3.534,-33.874)
N7: (10.463,-4.983,-35.411)
N9: (12.612,-4.520,-34.928)
O5': (15.960,-7.446,-38.003)
O3': (15.573,-7.737,-33.949)
OP2: (14.877,-8.272,-40.119)
C3': (14.716,-6.801,-34.576)
C1': (14.084,-4.575,-34.972)
C5': (14.882,-7.370,-37.080)
O4': (14.477,-5.144,-36.206)
C8: (11.719,-5.240,-35.684)
O2': (15.949,-4.997,-33.534)
C6: (9.538,-3.352,-33.680)
C5: (10.534,-4.032,-34.402)
C4: (11.850,-3.738,-34.091)
P: (15.726,-7.195,-39.558)
C4': (15.178,-6.395,-35.967)
C2': (14.646,-5.461,-33.862)
C2: (11.244,-2.287,-32.550)
N1: (9.931,-2.466,-32.741)
N3: (12.277,-2.864,-33.162)
N6: (8.231,-3.534,-33.874)
N7: (10.463,-4.983,-35.411)
N9: (12.612,-4.520,-34.928)
O5': (15.960,-7.446,-38.003)
O3': (15.573,-7.737,-33.949)
OP1: (1.075,-10.091,-30.517)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
Image (generated by PyMOL):