Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B51:B23
Extra
PDB:
ATOM 1 O3' A A 50 22.971 -2.013 -10.078 1.00 72.73 O
ATOM 2 P A A 51 23.958 -3.195 -10.533 1.00 75.81 P
ATOM 3 OP1 A A 51 23.528 -4.421 -9.821 1.00 70.69 O
ATOM 4 OP2 A A 51 25.344 -2.707 -10.337 1.00 75.45 O
ATOM 5 O5' A A 51 23.648 -3.336 -12.088 1.00 79.02 O
ATOM 6 C5' A A 51 24.064 -2.339 -13.009 1.00 70.78 C
ATOM 7 C4' A A 51 23.007 -2.068 -14.048 1.00 61.41 C
ATOM 8 O4' A A 51 22.214 -0.914 -13.655 1.00 62.27 O
ATOM 9 C3' A A 51 23.515 -1.695 -15.430 1.00 57.09 C
ATOM 10 O3' A A 51 23.933 -2.809 -16.195 1.00 65.23 O
ATOM 11 C2' A A 51 22.328 -0.953 -16.017 1.00 56.77 C
ATOM 12 O2' A A 51 21.296 -1.861 -16.374 1.00 59.90 O
ATOM 13 C1' A A 51 21.868 -0.159 -14.800 1.00 59.58 C
ATOM 14 N9 A A 51 22.550 1.146 -14.721 1.00 60.15 N
ATOM 15 C8 A A 51 23.619 1.494 -13.932 1.00 60.40 C
ATOM 16 N7 A A 51 24.013 2.733 -14.099 1.00 57.81 N
ATOM 17 C5 A A 51 23.153 3.232 -15.067 1.00 50.18 C
ATOM 18 C6 A A 51 23.050 4.491 -15.681 1.00 50.53 C
ATOM 19 N6 A A 51 23.853 5.520 -15.397 1.00 54.22 N
ATOM 20 N1 A A 51 22.079 4.658 -16.605 1.00 52.24 N
ATOM 21 C2 A A 51 21.275 3.625 -16.886 1.00 49.88 C
ATOM 22 N3 A A 51 21.276 2.396 -16.376 1.00 50.85 N
ATOM 23 C4 A A 51 22.249 2.264 -15.460 1.00 50.64 C
ATOM 24 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 25 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 26 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 27 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
TER
ATOM 1 O3' A B 22 31.181 10.124 -17.122 1.00 67.18 O
ATOM 2 P G B 23 31.306 9.421 -18.561 1.00 65.98 P
ATOM 3 OP1 G B 23 32.700 8.926 -18.684 1.00 67.79 O
ATOM 4 OP2 G B 23 30.801 10.390 -19.565 1.00 59.48 O
ATOM 5 O5' G B 23 30.302 8.191 -18.442 1.00 69.45 O
ATOM 6 C5' G B 23 30.515 7.162 -17.485 1.00 69.52 C
ATOM 7 C4' G B 23 29.385 6.163 -17.487 1.00 67.05 C
ATOM 8 O4' G B 23 28.170 6.794 -17.001 1.00 64.49 O
ATOM 9 C3' G B 23 28.996 5.602 -18.847 1.00 69.02 C
ATOM 10 O3' G B 23 29.835 4.540 -19.268 1.00 71.07 O
ATOM 11 C2' G B 23 27.545 5.192 -18.638 1.00 63.01 C
ATOM 12 O2' G B 23 27.466 3.958 -17.938 1.00 62.04 O
ATOM 13 C1' G B 23 27.053 6.305 -17.713 1.00 58.06 C
ATOM 14 N9 G B 23 26.458 7.424 -18.464 1.00 52.88 N
ATOM 15 C8 G B 23 27.124 8.507 -18.985 1.00 52.97 C
ATOM 16 N7 G B 23 26.336 9.346 -19.597 1.00 51.03 N
ATOM 17 C5 G B 23 25.073 8.785 -19.469 1.00 50.22 C
ATOM 18 C6 G B 23 23.813 9.244 -19.934 1.00 50.24 C
ATOM 19 O6 G B 23 23.553 10.271 -20.573 1.00 51.22 O
ATOM 20 N1 G B 23 22.788 8.371 -19.586 1.00 47.52 N
ATOM 21 C2 G B 23 22.945 7.206 -18.882 1.00 50.34 C
ATOM 22 N2 G B 23 21.827 6.505 -18.651 1.00 46.39 N
ATOM 23 N3 G B 23 24.113 6.767 -18.442 1.00 54.97 N
ATOM 24 C4 G B 23 25.128 7.599 -18.768 1.00 55.70 C
ATOM 25 P C B 24 30.525 4.581 -20.719 1.00 69.44 P
ATOM 26 OP1 C B 24 30.388 5.967 -21.229 1.00 59.53 O
ATOM 27 OP2 C B 24 29.945 3.469 -21.511 1.00 73.65 O
ATOM 28 O5' C B 24 32.052 4.271 -20.391 1.00 67.02 O
TER
ATOM 2 P A A 51 23.958 -3.195 -10.533 1.00 75.81 P
ATOM 3 OP1 A A 51 23.528 -4.421 -9.821 1.00 70.69 O
ATOM 4 OP2 A A 51 25.344 -2.707 -10.337 1.00 75.45 O
ATOM 5 O5' A A 51 23.648 -3.336 -12.088 1.00 79.02 O
ATOM 6 C5' A A 51 24.064 -2.339 -13.009 1.00 70.78 C
ATOM 7 C4' A A 51 23.007 -2.068 -14.048 1.00 61.41 C
ATOM 8 O4' A A 51 22.214 -0.914 -13.655 1.00 62.27 O
ATOM 9 C3' A A 51 23.515 -1.695 -15.430 1.00 57.09 C
ATOM 10 O3' A A 51 23.933 -2.809 -16.195 1.00 65.23 O
ATOM 11 C2' A A 51 22.328 -0.953 -16.017 1.00 56.77 C
ATOM 12 O2' A A 51 21.296 -1.861 -16.374 1.00 59.90 O
ATOM 13 C1' A A 51 21.868 -0.159 -14.800 1.00 59.58 C
ATOM 14 N9 A A 51 22.550 1.146 -14.721 1.00 60.15 N
ATOM 15 C8 A A 51 23.619 1.494 -13.932 1.00 60.40 C
ATOM 16 N7 A A 51 24.013 2.733 -14.099 1.00 57.81 N
ATOM 17 C5 A A 51 23.153 3.232 -15.067 1.00 50.18 C
ATOM 18 C6 A A 51 23.050 4.491 -15.681 1.00 50.53 C
ATOM 19 N6 A A 51 23.853 5.520 -15.397 1.00 54.22 N
ATOM 20 N1 A A 51 22.079 4.658 -16.605 1.00 52.24 N
ATOM 21 C2 A A 51 21.275 3.625 -16.886 1.00 49.88 C
ATOM 22 N3 A A 51 21.276 2.396 -16.376 1.00 50.85 N
ATOM 23 C4 A A 51 22.249 2.264 -15.460 1.00 50.64 C
ATOM 24 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 25 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 26 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 27 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
TER
ATOM 1 O3' A B 22 31.181 10.124 -17.122 1.00 67.18 O
ATOM 2 P G B 23 31.306 9.421 -18.561 1.00 65.98 P
ATOM 3 OP1 G B 23 32.700 8.926 -18.684 1.00 67.79 O
ATOM 4 OP2 G B 23 30.801 10.390 -19.565 1.00 59.48 O
ATOM 5 O5' G B 23 30.302 8.191 -18.442 1.00 69.45 O
ATOM 6 C5' G B 23 30.515 7.162 -17.485 1.00 69.52 C
ATOM 7 C4' G B 23 29.385 6.163 -17.487 1.00 67.05 C
ATOM 8 O4' G B 23 28.170 6.794 -17.001 1.00 64.49 O
ATOM 9 C3' G B 23 28.996 5.602 -18.847 1.00 69.02 C
ATOM 10 O3' G B 23 29.835 4.540 -19.268 1.00 71.07 O
ATOM 11 C2' G B 23 27.545 5.192 -18.638 1.00 63.01 C
ATOM 12 O2' G B 23 27.466 3.958 -17.938 1.00 62.04 O
ATOM 13 C1' G B 23 27.053 6.305 -17.713 1.00 58.06 C
ATOM 14 N9 G B 23 26.458 7.424 -18.464 1.00 52.88 N
ATOM 15 C8 G B 23 27.124 8.507 -18.985 1.00 52.97 C
ATOM 16 N7 G B 23 26.336 9.346 -19.597 1.00 51.03 N
ATOM 17 C5 G B 23 25.073 8.785 -19.469 1.00 50.22 C
ATOM 18 C6 G B 23 23.813 9.244 -19.934 1.00 50.24 C
ATOM 19 O6 G B 23 23.553 10.271 -20.573 1.00 51.22 O
ATOM 20 N1 G B 23 22.788 8.371 -19.586 1.00 47.52 N
ATOM 21 C2 G B 23 22.945 7.206 -18.882 1.00 50.34 C
ATOM 22 N2 G B 23 21.827 6.505 -18.651 1.00 46.39 N
ATOM 23 N3 G B 23 24.113 6.767 -18.442 1.00 54.97 N
ATOM 24 C4 G B 23 25.128 7.599 -18.768 1.00 55.70 C
ATOM 25 P C B 24 30.525 4.581 -20.719 1.00 69.44 P
ATOM 26 OP1 C B 24 30.388 5.967 -21.229 1.00 59.53 O
ATOM 27 OP2 C B 24 29.945 3.469 -21.511 1.00 73.65 O
ATOM 28 O5' C B 24 32.052 4.271 -20.391 1.00 67.02 O
TER
Atoms:
OP1: (23.528,-4.421,-9.821)
OP2: (25.344,-2.707,-10.337)
C3': (23.515,-1.695,-15.430)
C1': (21.868,-0.159,-14.800)
C5': (24.064,-2.339,-13.009)
O4': (22.214,-0.914,-13.655)
C8: (23.619,1.494,-13.932)
O2': (21.296,-1.861,-16.374)
C6: (23.050,4.491,-15.681)
C5: (23.153,3.232,-15.067)
C4: (22.249,2.264,-15.460)
P: (23.958,-3.195,-10.533)
C4': (23.007,-2.068,-14.048)
C2': (22.328,-0.953,-16.017)
C2: (21.275,3.625,-16.886)
N1: (22.079,4.658,-16.605)
N3: (21.276,2.396,-16.376)
N6: (23.853,5.520,-15.397)
N7: (24.013,2.733,-14.099)
N9: (22.550,1.146,-14.721)
O5': (23.648,-3.336,-12.088)
O3': (23.933,-2.809,-16.195)
OP2: (25.344,-2.707,-10.337)
C3': (23.515,-1.695,-15.430)
C1': (21.868,-0.159,-14.800)
C5': (24.064,-2.339,-13.009)
O4': (22.214,-0.914,-13.655)
C8: (23.619,1.494,-13.932)
O2': (21.296,-1.861,-16.374)
C6: (23.050,4.491,-15.681)
C5: (23.153,3.232,-15.067)
C4: (22.249,2.264,-15.460)
P: (23.958,-3.195,-10.533)
C4': (23.007,-2.068,-14.048)
C2': (22.328,-0.953,-16.017)
C2: (21.275,3.625,-16.886)
N1: (22.079,4.658,-16.605)
N3: (21.276,2.396,-16.376)
N6: (23.853,5.520,-15.397)
N7: (24.013,2.733,-14.099)
N9: (22.550,1.146,-14.721)
O5': (23.648,-3.336,-12.088)
O3': (23.933,-2.809,-16.195)
OP1: (32.700,8.926,-18.684)
OP2: (30.801,10.390,-19.565)
C3': (28.996,5.602,-18.847)
C1': (27.053,6.305,-17.713)
C5': (30.515,7.162,-17.485)
O6: (23.553,10.271,-20.573)
O4': (28.170,6.794,-17.001)
C8: (27.124,8.507,-18.985)
C2: (22.945,7.206,-18.882)
C6: (23.813,9.244,-19.934)
C5: (25.073,8.785,-19.469)
C4: (25.128,7.599,-18.768)
P: (31.306,9.421,-18.561)
C4': (29.385,6.163,-17.487)
C2': (27.545,5.192,-18.638)
O2': (27.466,3.958,-17.938)
N1: (22.788,8.371,-19.586)
N2: (21.827,6.505,-18.651)
N3: (24.113,6.767,-18.442)
N7: (26.336,9.346,-19.597)
N9: (26.458,7.424,-18.464)
O5': (30.302,8.191,-18.442)
O3': (29.835,4.540,-19.268)
OP2: (30.801,10.390,-19.565)
C3': (28.996,5.602,-18.847)
C1': (27.053,6.305,-17.713)
C5': (30.515,7.162,-17.485)
O6: (23.553,10.271,-20.573)
O4': (28.170,6.794,-17.001)
C8: (27.124,8.507,-18.985)
C2: (22.945,7.206,-18.882)
C6: (23.813,9.244,-19.934)
C5: (25.073,8.785,-19.469)
C4: (25.128,7.599,-18.768)
P: (31.306,9.421,-18.561)
C4': (29.385,6.163,-17.487)
C2': (27.545,5.192,-18.638)
O2': (27.466,3.958,-17.938)
N1: (22.788,8.371,-19.586)
N2: (21.827,6.505,-18.651)
N3: (24.113,6.767,-18.442)
N7: (26.336,9.346,-19.597)
N9: (26.458,7.424,-18.464)
O5': (30.302,8.191,-18.442)
O3': (29.835,4.540,-19.268)
Image (generated by PyMOL):